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$Id: README,v 1.12 2006/07/25 11:02:56 gcosmo Exp $
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     =========================================================
                      Geant4 - Composite calorimeter example
     =========================================================

                             README
                      ---------------------

 CompositeCalorimeter is an example of a test-beam simulation used 
 by the CMS Collaboration to validate Geant4 against real data taken 
 (in 1996) in a CMS Hadron calorimeter test-beam.
 The name "Composite" for this example emphasizes that, although the 
 test-beam had the goal of studying the hadronic calorimeter response, 
 part of the data was taken with the presence of the electromagnetic 
 crystal calorimeter in front of the hadronic calorimeter, to better 
 reproduce the situation as in the real CMS experiment. 
 The geometry of the simulation has been setup in such a way to allow
 very easily, at run time (therefore without need of changing any code; 
 see below for the details) the inclusion or exclusion of the 
 electromagnetic calorimeter part. 
 Although some important aspects, for a detailed comparison between 
 test-beam data and simulation, like beam profile, noise, and digitization, 
 have been omitted here (to avoid too many technical details),
 nevertheless, this example is able to reproduce the main features of
 most of the relevant observables as measured in the real test-beam. 
 The output of this example, if the AIDA or Anaphe/Lizard environment 
 has been properly setup (see below), consists of a set of histograms 
 and one ntuple which are stored on a HBOOK file.
 In our opinion, the most original "lesson" which is offered by this
 advanced example for the Geant4 user is to show how the Geometry and
 the Sensitive/Hit part of the simulation is treated in a big experiment.
 Although the details of how this is done vary from experiment to
 experiment (it is worth, for instance, to compare with the Atlas-based
 advanced example lAr_calorimeter), the main driving needs and goals 
 are quite general: to have consistency, but avoiding duplications
 and couplings as much as possibile, between Simulation, Reconstruction,
 and Visualization. Notice that the solution offered in this example
 by CMS could appear "overdone" for the sake of simulating only a 
 relatively simple test-beam setup; but it should be kept in mind
 that the same approach is used also for the full CMS detector 
 simulation, as well as for any subdetector.  

  
1. Setting up the environment variables
---------------------------------------

 The user should first setup, as "usual", the Geant4 environmental
 variables (in particular, the variable G4ANALYSIS_USE must be set
 if you want to have the histograms and the ntuple).
 Then the specific setup for this example, including the AIDA/PI part
 used in the analysis, should be run:
 
     >  source envExample.csh      in the case of C-shell
 or
     >  . envExample.sh            in the case of bash-shell
 
 The analysis part is based on AIDA/PI.
 Please take a look to the web page:  http://www.cern.ch/PI .


2. Sample run
-------------

 Once the environmental variables are setup, you can get the executable
    $G4WORKDIR/bin/$G4SYSTEM/CompositeCalorimeter
 by typing "gmake" on this directory.
 Then, you can execute it using the Geant4 macro command input file test.g4mac
 as follows:    
 
    >  $G4WORKDIR/bin/$G4SYSTEM/CompositeCalorimeter test.g4mac
 
 which simulate 10 events, each being a 100 GeV pi- incident on the 
 electromagnetic crystal calorimeter followed by the hadronic calorimeter,
 without magnetic field.
 The output is the HBOOK file "ccal.his" , which can be seen either with
 Lizard (or any other AIDA-compliant package) or with Paw or Root.
 See part "8. Analysis / Histogramming" below for more details on the
 content of that file.
 If you run instead: 

    >  $G4WORKDIR/bin/$G4SYSTEM/CompositeCalorimeter

 after having setup the Geant4 visualization variables and the PATH,
 you can visualize the geometry of the apparatus, and also see some
 events. Similarly, you can get a very simple graphical user interface
 that allows to select the particle type, its energy, and the number
 of events (between a limited number of possibilities).
 For more details, see part "9. Visualization / GUI".
 

3. Detector description
-----------------------
 
 Let's start with a brief description of the test-beam setup.

 There are two possible configurations: 
   i)  HCAL only, that is only the hadronic calorimeter is present;
  ii)  ECAL+HCAL, that is the electromagnetic calorimeter (ECAL)
                  is placed in front of the hadronic calorimeter.
 ECAL is made of 23 cm long PbWO4 crystals (corresponding to about
 25.8 radiation lengths, and 1.1 interaction lengths); for the 
 test beam a  7 x 7 = 49  matrix of crystals is used.
 HCAL is a sampling calorimeter, with plastic scintillator as sensitive
 part and copper as absorber. 28 scintillator plates were used with
 absorber of varying thickness in between, and also varying thickness
 and type of scintillator. More precisely:
   --- layer 1: 2 cm of Copper
   --- layer 2 to 7: 4 cm of Copper
   --- layer 8 to 21: 6 cm of Copper
   --- layer 22 to 27: 8 cm of Copper
 For the scintillators: 2 mm passive Plastic; 4 mm active Plastic;
 1 mm passive Plastic. 
 The total length of HCAL consists of 152 cm of Copper plus 189 mm of Plastic.
 The dimension orthogonal to the beam direction is  64 cm x 64 cm.
 The ECAL and HCAL considered here are prototypes for the Central and
 Endcap calorimeters of the CMS detector (which covers the rapidity
 region |eta| < 3.0 ; CMS has also a Forward calorimeter, which covers
 the region 3.0 < |eta| < 5.0, but this part was not considered in 
 this test-beam setup). Notice, however, that there are more layers 
 (28 instead of 19 in the Barrel or 18 in the Endcap) of HCAL in the 
 test-beam setup than in the real CMS detector, in order to study 
 energy containment. Therefore, the ECAL+HCAL in the test-beam amounts 
 to more than 11 radiation lengths as for the real CMS detector (the
 19 layers of the Barrel have each 6 cm of absorber, whereas the 
 18 layers of the Endcap have each 6.6 cm of absorber, so that the
 number of interaction lengths are rougly the same). 
 Five values of the magnetic field (parallel to the face of the scintillators)
 have been considered in the test-beam: 0.0 , 0.375 , 0.75 , 1.50 , 3.0 Tesla.

 In order to set the magnetic field, you have to edit the file
       dataglobal/fmap.tb96
 and change the first number (which appears in the third line of
 that file, on the first column; the unit being Tesla): 
   #. Field map
   *DO FLDM
     0.0   9               652.0
 for example, if you want a magnetic field of 3.0 Tesla the last
 line must be set as follows (the magnetic field unity is kilo Gauss).
     30.0   9               652.0

 The default stepper in magnetic field is G4ClassicalRK4, but other
 possibilities can be selected by editing the file 
 src/CCalDetectorConstruction.cc  (look at the string "***STEPPER***").

 In order to deactivate either the ECAL or the HCAL, it is enough
 to comment out the corresponding line in the file g4testbeamhcal96.conf, 
 using "#" as the comment character. For instance, to have only the HCAL
 without ECAL:
 "HcalTB96"                      "tbhcal96"              1
 #"CrystalMatrixModule"           "tbhcal96xtal"          1  


 In this test-beam setup, at the back of ECAL, there is also some 
 material for support and readout, which has been considered in the 
 simulation. For the HCAL, only the fibres are close to the test-beam, 
 and because they have the same composition as the scintillators
 they are adequately represented in the simulation; the remaining
 of the readout, including the photomultipliers, are in readout boxes
 far away from the HCAL, and hence are not present in the simulation.

 Let's summarizes now the geometry description of the simulation.
 As said in the introduction, this part is the most original and
 important of this example, but it is quite complex and can be fully
 appreciated only in the context of the CMS software framework, in 
 particular in the relation between Simulation, Reconstruction, and
 Visualization. Therefore we limit ourself to only few considerations,
 pointing to the internal CMS documentation for more details.
 
 --- In order to share the same geometrical and physical information
     about CMS between Simulation, Reconstruction, and Visualization,
     avoiding inconsistencies, duplications, and unnecessary dependecies,
     all these information is store, once for all, in common databases
     (typically in XML format), instead of putting them inside C++ classes, 
     as usually done in simpler detector descriptions (in most of the
     the Geant4 examples, novice or advanced, the geometry information
     is kept inside the concrete class which inherits from 
     G4VUserDetectorConstruction). For simplicity, in this example,
     these "databases" are nothing more than ASCII files:

        datageom/ : tbhcal96.geom, tbhcal96hcal.geom, tbhcal96xtal.geom
                    store the information about the experimental Hall, 
                    the HCAL, and the ECAL, respectively.

        dataconf/ : g4testbeamhcal96.conf, testbeamhcal96.conf
                    store the information about which configuration
                    (HCAL only, or ECAL+HACL) is considered, in the
                    Simulation and Reconstruction, respectively.
                    
        dataglobal/ : fmap.tb96, material.cms, rotation.cms
                    The first one is the magnetic field map (how the 
                    intensity of the magnetic field, in the direction
                    orthogonal to the beam direction, varies along
                    the beam axis). The second one, material.cms, 
                    keeps the full collection of all materials used in 
                    the CMS detector (not only in the calorimeters, 
                    although we are simulating only them in this example!).
                    The third one, rotation.cms, collects a set of useful
                    rotation parameters (angles).  
   
        datavis/ : tbhcal96.vis, tbhcal96hcal.vis, tbhcal96xtal.vis
	           visualization information for, respectively, the
                   experimental Hall, HCAL, and ECAL.

 --- In order to allow an high degree of flexibility, at the geometry
     level the user can choose which subsystem of the detector setup
     should be simulated and can activate or deactivate the sensitive
     parts, subsystem by subsystem. This can be done at run time, 
     by modifying one of the above database information, without need 
     of putting the hands on the code, recompiling, etc.

 --- There are two "parallel geometry factories": one described by "core" 
     classes, which are independent from the Simulation (and therefore
     can be used, for instance, by the Reconstruction); and one which 
     is specific of the Simulation. In the latter case (Geant4 side of
     the geometry model), all the geometry factories are derived from the
     base class CCalG4Albe. Furthermore, using double inheritance, each
     of them derives also from the counterpart in the "core" hierarchy.  
     The design of the CCalG4Able class helps a modular approach and easy
     interchanging at the level of subdetectors, allowing a straightforward
     transition from the simulation of the entire CMS detector to that of
     just a part of it, or to a test-beam geometry, as indeed in this example.
     Of course this modular, flexible, and general approach does not come
     for free: the price to pay here is its complexity, which would be 
     otherwise unjustified if we limited ourself to the pure simulation
     of a relatively simple test-beam setup.

 --- See "10. Classes Overview" below for a schematic summary of the 
     various classes involved in the Geometry description of this example.


4. Physics processes
--------------------
 
 By the default, one of the ufficial High Energy Physics List for 
 Calorimetry, QGSC, is used in this example. However, it is 
 very easy to use instead either LHEP or QGSP. To do so, it is
 enough to comment/uncomment a line in the main CompositeCalorimeter.cc :
 for example, if you want to use LHEP instead of the default QGSC
 you have to change it as follows:

  //***LOOKHERE*** CHOOSE THE PHYSICS LIST.
  runManager->SetUserInitialization(new LHEP);     // LHEP     
  // runManager->SetUserInitialization(new QGSP);     // QGSP   
  // runManager->SetUserInitialization(new QGSC);     // QGSC
  //***endLOOKHERE***

 Notice that, for most of the cases (and certainly also in this case
 in which we don't even take into account the beam profile, noise
 and digitization!) the faster LHEP Physics List would be good enough
 for calorimetry studies. However, we prefer to use, as default, the
 more sophisticated (but slower) QGSC Physics List for the learning 
 purposes of this example.


5. Particle Generator
---------------------
  
 The 1996 test-beam has been taken with the following particles:
    --- 225 GeV muons (for calibration)
    --- 10 to 300 GeV pions
    --- 10 to 300 GeV electrons
 therefore the standard Geant4 Particle Gun has been used as primary
 generator. Notice that, for the sake of keeping the example not too
 complicated, the proper simulation of the beam profile and 
 beam contamination have been neglected.  


6. Hits 
-------
 
 In CMS there are two groups of hits: Tracker-like and Calorimeter-like.
 Only the latter one appears in this example. 
 For the same reasons, as seen for the Geometry, of consistency without 
 duplication of information and unnecessary coupling between Simulation, 
 Reconstruction, and Visualization, the simulation calorimeter hit class,
 CCalG4Hit, doubly inherits from the common Geant4 abstract class for
 all hits, G4VHit, and from the "core" (i.e. simulation independent)
 CMS calorimeter hit class, CCalHit.
 A new Hit object is created
   - for each new particle entering the calorimeter;
   - for each detector unit (i.e cristal or fiber or scintillator layer);
   - for each nanosecond of the shower development;
 The information stored in each CCalHit object is the following:
   - Entry  : local coordinates of the entrance point of the particle
              in the unit where the shower starts; 
   - the TrackID  : Identification number of the incident particle;
   - the IncidentEnergy  : kinetic energy of that incident particle;    
   - the UnitID : the identification number of the detector unit
                  (crystal, or fiber, or scintillator layer); 
   - the TimeSlice : the time interval, in nanoseconds, in which the 
                     hit has been created;
   - the EnergyDeposit : the energy deposit in this hit.    
 Notice that all hit objects created for a given shower have the same 
 values for the first three pieces of information.


No Noise and Digitization 
--------------------------
 
 In order to keep the complexity of this example to a reasonable 
 level, both noise and digitization effects have not been included.
 

7. User Actions
----------------
 
 In this example. there have been used the following User Actions:

 --- G4UserRunAction (the derived, concrete class is CCalRunAction):
     it is used to invoke the Analysis object at the beginning of
     the Run, to instantiate it and passing it the Run number, and
     at the end of the Run, to inform it that the Run is finished
     and therefore the histograms, ntuples, etc. must be closed.

 --- G4UserEventAction (the derived, concrete class is CCalEndOfEventAction):
     it is used to examine, at the end of the Event, all collected
     (calorimeter) hits, extract the various observables which are
     interesting (to the goal of understanding things like: the effect
     of magnetic field on scintiallator; choice of the absorber
     thickness by optimizing resolution versus containment; impact of
     the absorber depth in the energy caontainment; electromagnetic
     calorimeter contribution in the electron - pion separation; etc.)
     and finally call the analysis object to store such selected
     information on histograms and/or in the ntuple.
     The name of the class "CCalEndOfEventAction" is motivated by the
     fact that at the beginning of the Event nothing is done. 

 --- G4UserSteppingAction (the derived, concrete class is CCalSteppingAction):
     it is used to extract some "unphysical" information (that is not
     experimentally measurable, although interesting for a better 
     understanding of the shower development), namely the lateral profile 
     and the deposit as a function of the time (see "8.Analysis/Histogramming 
     for more details"), which is available only from simulation, and then, 
     at the end of Event, the analysis object is invoked to store such
     information on histograms.      
     Please notice that the stepping action is not used to create hits.

 --- G4UserStackingAction (the derived, concrete class is CCalStackingAction):
     it is used to ensure that the same track ID of the particle 
     originating a shower appears in all hits (calorimeter hit objects 
     of class CCalHit) of the shower, in any calorimeter part. 


8. Analysis / Histogramming
----------------------------

 The analysis part of CompositeCalorimeter is kept in class CCalAnalysis,
 and is based on the AIDA interfaces and their implementation in PI.
 Please take a look to the web page:  http://www.cern.ch/PI .    
 Both the histograms and the ntuple are saved at the end of the run in the 
 HBOOK file "ccal.his". You can than analyze offline the contents of such 
 a file, using Lizard (or any other AIDA-compliant package) or with 
 Paw or Root. Please note that in a multiple run session, the last run 
 always override the HBOOK file.
 What the histograms and the variables of the ntuple represent is 
 explained below:
 
  Histograms  100 - 127 : energy deposit (in GeV) in the sensitive part
                          (plastic scintillator layer) of one Hadronic 
                          calorimeter module (there are 28 modules, numbered
                          from 0 to 27, and the corresponding histogram has
                          ID = 100 + number of module).
  Ntuple variables  hcal0 - hcal27 : provide the same information.

  Histograms  200 - 248 : energy deposit (in GeV) in one crystal
                          electromagnetic towers (there are a matrix of
                          7 x 7 = 49 towers, numbered from 0 to 48, and 
                          the corresponding histogram has 
                          ID = 200 + number of tower).
  Ntuple variables  ecal0 - ecal48 : provide the same information.
  
  Histograms  300 - 339 : total energy deposit (in GeV) in any 
                          electromagnetic crystal tower or hadronic module 
                          (either in a sensitive or insensitive layer)
                          in one of the 40 nanosecond time slices: in other
                          words, histogram  300+I , where I = 0 - 39,
                          contains the total deposit energy between
                          I and I+1 nanoseconds after the "collision".  
                          (Notice that the time window considered, 
                           40 nanoseconds, is larger than the LHC 
                           bunch-crossing of 25 nanoseconds.)
  
  Histograms  400 - 469 : energy profile (in GeV), summed over all layers
                          sensitive (plastic scintillator) and insensitive
                          (copper absorber), as a function of the radial
                          distance (in centimeter) from the beam axis 
                          ( ID histo = 400 + radial distance in cm ).

  Histogram  4000 : total energy deposit (in GeV) in the sensitive parts
                    of either the electromagnetic or hadronic calorimeters. 
  Ntuple variable  edep provides the same information.

  Other ntuple variables are the following:  
       ---  elab : energy (in GeV) of the incident particle.
       ---  xpos, ypos, zpos : position (in mm) from where the projectile
                               has been shot.
       ---  edec, edhc : total energy deposit (in GeV) in the sensitive
                         parts of, respectively, the electromagnetic 
                         and hadronic calorimeters. Notice that their
                         sum  edec+edhc  coincides with  edep

  Notice that lateral profile (400-469) and time-slice (300-339) 
  histograms show purely Monte Carlo quantities, which cannot be 
  experimentally measured. 
  Please be careful that the range of the histograms has been chosen
  in such a way to contain most of the entries, but only few histograms
  fill a large fraction of that range, whereas the remaining majority
  fill only the first few bins (corresponding to lower energy), and,
  therefore, when plotted they look almost empty, but they are not,
  and the results are sensible. We suggest to plot the ntuple's variables,
  rather than the histograms, when the same information is available
  from the ntuple.


9. Visualization / GUI
-----------------------
  
 If you setup one of the following Geant4 environmental variables:
    G4VIS_USE_DAWN
    G4VIS_USE_VRML
    G4VIS_USE_OPENGLX
 which correspond to the use of DAWN, VRML, and OPENGLX, respectively, 
 as visualization engine of Geant4, and set properly the corresponding 
  PATH  as well, it is then possible to visualize the detector and also 
 some events. 
 To do so, you have to run 
     >  $G4WORKDIR/bin/$G4SYSTEM/CompositeCalorimeter
 without input file: you then see the detector; after that,
 you can select the particle gun and its energy, in the
 case you want something different from the the default 
 (which is a 100 GeV pi-), for example:
     Idle> /gun/particle e-
     Idle> /gun/energy 200 GeV
 and then run some events, for example:
     Idle> /run/beamOn 3

 Notice that, by default, OGLIX is used for the visualization,
 because it is quite fast and it does not produce any files in
 output. However, you can always choose something else, for example
 VRML2FILE or DAWNFILE, either interactively as follows:
    Idle> /vis/open DAWNFILE
 or by changing the default, by editing the file (main program)
 CompositeCalorimeter.cc and comment/uncomment the lines
 in such a way to have, at the end:
    visCommand = "/vis/open DAWNFILE";
    // visCommand = "/vis/open VRML2FILE";
    // visCommand = "/vis/open OGLIX";

 The tracks that are shown include both charged and neutral particles 
 of any momentum: if you want instead only charged, or only neutral, 
 then you have simply to edit  src/CCalEndOfEventAction.cc 
 at the end of the method  EndOfEventAction  and uncomment the line 
 where the condition on the charge is made (it should then be 
 straighforward to eventual add some other conditions, for example 
 if you want to see only those particles that satisfy certain 
 kinematic conditions). 
 
 Rather than to specify "by hand" the type of particle gun,
 its energy, and the number of events, it is possible to have
 a very simple GUI (graphical user interface) from which to make 
 such choices, between a limited set of possibilities, via menus.
 Such GUI is based on Motif XmCommand widget, but it would be 
 straightforward, eventually, to make the necessary changes 
 in order to use a different one.
 The only thing you need to do to get the GUI is to setup 
 the following Geant4 environmental variables:  
   G4UI_BUILD_XM_SESSION=1
   G4UI_USE_XM=1
 Then, if you run the executable without specifying a macro file
 (like test.g4mac):
     >  $G4WORKDIR/bin/$G4SYSTEM/CompositeCalorimeter
 a window automatically pops out, with the menus where you
 can make your selection of particle type, energy, and number 
 of events to be run. 


10. Classes Overview
---------------------

 This is a schematic overview of the classes defined in this example:

  CCalPrimaryGeneratorAction
  CCalPrimaryGeneratorMessenger
	User action for primaries generator.	 

  CCalDetectorConstruction
  CCalAMaterial
  CCalDataSet
  CCalDetector
  CCalEcal
  CCalEcalOrganization
  CCalG4Able
  CCalG4Ecal
  CCalG4Hall
  CCalG4Hcal
  CCalGeometryConfiguration
  CCalHall
  CCalHcal
  CCalHcalOrganization
  CCalMagneticField
  CCalMaterial
  CCalMaterialFactory
  CCalRotationMatrixFactory
  CCalVOrganization
  CCalVisManager
  CCalVisualisable
  CCaloOrganization
  CCalutils
	Geometry and material definitions for the detector.
        Notice in particular that:
          CCalHall, CCalEcal, CCalHcal derive from CCalDetector;
          CCalG4Hall, CCalG4Ecal, CCalG4Hcal derive from the above 
             corresponding classes and from CCalG4Able;
          CCalEcalOrganization, CCalHcalOrganization derive from
             CCalVOrganization : each sensitive cell has an unique
             number for detector organization (this is a software
             ID not an hardware/electronic one).
 	
  CCalHit
  CCalG4Hit
  CCalG4HitCollection
  CCalSDList
  CCalSensAssign
  CCalSensitiveConfiguration
  CCalSensitiveDetectors
  CCaloSD
        Hit and Sensitive Detectors. 
        Notice in particular that:
          CCalG4Hit derives from G4VHit and CCalHit;
          CCaloSD derives from G4VSensitiveDetector.          

  CCalAnalysis
	Analysis manager class which uses Anaphe.

  CCalRunAction
	User run action class.

  CCalEndOfEventAction
	User event action class.

  CCalStackingAction
        User Stacking action class.

  CCalSteppingAction
        User Stepping action class.

