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Many fixes for new configuration differences between old and new.

Not complete yet, but after using comparePickledConfig.py there are a few real issues fixed, and some changes to make comparison easier.

  • use useAlignmentCorrections on by default
  • some missing configuration of tools e.g. CalibCscStripFitterCfg, MuonPhiHitSelector, MuPatHitToolCfg
  • some names changed to match old configuration
  • private tool configuration added to MooTrackFitterCfg

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