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TestHepMC Patches and Warning cleanup

Zach Marshall requested to merge zmarshal/athena:master_TestHepMC_Patches into master

Adding back a patch to master that was in !36323 (merged) (thanks to Jason Veach for the report).

While I'm here, tidying up a bunch of warning messages that were bothering me a bit (things that printed blank lines, things that printed a header but no actual output, etc).

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