diff --git a/Makefile b/Makefile
index 3210ae335f53ca94486c87a4c5e094577bce5d75..1ebcaf909b7de086e4c4bb579657cc96a2a7b1c8 100644
--- a/Makefile
+++ b/Makefile
@@ -50,7 +50,7 @@ $(CMSSW):
 	scramv1 project CMSSW $(CMSSW)
 	cd $(CMSSW)/src && eval `scramv1 runtime -sh` && \
 	git clone https://github.com/cms-jet/JetToolbox.git JMEAnalysis/JetToolbox -b jetToolbox_120X && \
-	(cd JMEAnalysis/JetToolbox; patch -p1 ../../../../jetToolbox_120X.patch) && \
+	(cd JMEAnalysis/JetToolbox/python; patch -p1 <../../../../../jetToolbox_120X.patch) && \
 	git clone $(ORIGIN) Core
 
 tables: