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Description

When running the DAC analysis, the output plots are empty and an error is raised for all DACs and the values put to 0.

Here is the output: http://peveraer.web.cern.ch/peveraer/GEM/fed1479-slot00_results.txt/

I checkout the latest master branch. I ran poetry install and then ran: gemos analyze dac -m qc7_setup.csv -c all_vfats.csv /tmp/gemdata/dacScan/fed1479-slot00.txt /tmp/gemdata/dacScan/fed1479-slot00_results.txt

The input file and the csv-file for the setup are attached.qc7_setup.csv

fed1479-slot00.txt

We tried to go back in history. Older commits give correct output txt file but the plotting fails.

E.g. for 113035c7

/home/gempro/.cache/pypoetry/virtualenvs/cmsgemos-analysis-LTZxmAh--py3.8/lib64/python3.8/site-packages/numpy/core/shape_base.py:65: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray.
  ary = asanyarray(ary)
Traceback (most recent call last):
  File "/home/gempro/.cache/pypoetry/virtualenvs/cmsgemos-analysis-LTZxmAh--py3.8/lib64/python3.8/site-packages/pandas/core/series.py", line 185, in wrapper
    raise TypeError(f"cannot convert the series to {converter}")
TypeError: cannot convert the series to <class 'float'>

The above exception was the direct cause of the following exception:

Traceback (most recent call last):
  File "/home/gempro/.cache/pypoetry/virtualenvs/cmsgemos-analysis-LTZxmAh--py3.8/bin/gemos", line 5, in <module>
    main()
  File "/home/gempro/cmsgemos-analysis/gemos/cli.py", line 209, in main
    args.func(args)
  File "/home/gempro/cmsgemos-analysis/gemos/cli.py", line 57, in <lambda>
    func=lambda args: dac_scan_analysis.create_configuration(
  File "/home/gempro/cmsgemos-analysis/gemos/analysis/dac_scan_analysis.py", line 228, in create_configuration
    plot_scan(input_df, output_df, output_dir / "plots")
  File "/home/gempro/cmsgemos-analysis/gemos/analysis/dac_scan_analysis.py", line 167, in plot_scan
    dac_scan_axs[group_index].plot(
  File "/home/gempro/.cache/pypoetry/virtualenvs/cmsgemos-analysis-LTZxmAh--py3.8/lib64/python3.8/site-packages/matplotlib/axes/_axes.py", line 1607, in plot
    self.add_line(line)
  File "/home/gempro/.cache/pypoetry/virtualenvs/cmsgemos-analysis-LTZxmAh--py3.8/lib64/python3.8/site-packages/matplotlib/axes/_base.py", line 2101, in add_line
    self._update_line_limits(line)
  File "/home/gempro/.cache/pypoetry/virtualenvs/cmsgemos-analysis-LTZxmAh--py3.8/lib64/python3.8/site-packages/matplotlib/axes/_base.py", line 2123, in _update_line_limits
    path = line.get_path()
  File "/home/gempro/.cache/pypoetry/virtualenvs/cmsgemos-analysis-LTZxmAh--py3.8/lib64/python3.8/site-packages/matplotlib/lines.py", line 1022, in get_path
    self.recache()
  File "/home/gempro/.cache/pypoetry/virtualenvs/cmsgemos-analysis-LTZxmAh--py3.8/lib64/python3.8/site-packages/matplotlib/lines.py", line 663, in recache
    x = _to_unmasked_float_array(xconv).ravel()
  File "/home/gempro/.cache/pypoetry/virtualenvs/cmsgemos-analysis-LTZxmAh--py3.8/lib64/python3.8/site-packages/matplotlib/cbook/__init__.py", line 1333, in _to_unmasked_float_array
    return np.asarray(x, float)
ValueError: setting an array element with a sequence.