Update Manual with framework and detector parameters, all adhere to new convention

doc/usermanual/chapters/configuration.tex

@@ -194,7 +194,7 @@ All supported rotations are extrinsic active rotations, i.e. the vector itself i
 \item The intrinsic resolution of the detector can be specified using the \parameter{resolution} parameter, a two-dimensional vector holding the position resolution for the column and row directions.
 \item The \parameter{time_offset} can be used to shift the individual detector time frames of reference to e.g.\ account for time of flight effects between different detector planes by adding a fixed offset.
 \item Pixels to be masked in the offline analysis can be placed in a separate file specified by the \parameter{mask_file} parameter explained in detail in Section~\ref{sec:masking}.
-\item A region of interest in the given detector can be defined using the \parameter{roi} parameter. More details on this functionality cna be found in Section~\ref{sec:roi}.
+\item A region of interest in the given detector can be defined using the \parameter{roi} parameter. More details on this functionality can be found in Section~\ref{sec:roi}.
 \end{itemize}
 
 An example configuration file describing a setup with one CLICpix2 detector (named \parameter{016_CP_PS} and two Timepix3~\cite{timepix} detectors (\parameter{W0013_D04}and \parameter{W0013_J05}) is the following:
@@ -215,6 +215,7 @@ orientation = -0.02deg, 0.0deg, -0.015deg
 orientation_mode = "xyz"
 pixel_pitch = 25um, 25um
 position = -0.9mm, 0.21mm, 106.0mm
+role = "dut"
 type = "CLICpix2"
 
 [W0013_J05]
@@ -223,6 +224,7 @@ orientation = -9deg, 9deg, 0deg
 orientation_mode = "xyz"
 pixel_pitch = 55um, 55um
 position = 0um, 0um, 204mm
+role = "reference"
 type = "Timepix3"
 \end{minted}
 

src/core/module/ModuleManager.cpp

@@ -701,7 +701,7 @@ void ModuleManager::finaliseAll() {
     // Write the output histogram file
     m_histogramFile->Close();
 
-    LOG(STATUS) << "Wrote histogram output file to " << global_config.getPath("histogramFile");
+    LOG(STATUS) << "Wrote histogram output file to " << global_config.getPath("histogram_file");
 
     // Write out update detectors file:
     if(global_config.has("detectors_file_updated")) {