removed example.conf, example.geo and example.sub

jobsub/example.conf

-[Corryvreckan]
-log_level = "WARNING"
-log_format = "DEFAULT"
-
-detectors_file = "/afs/cern.ch/user/j/jekroege/software/corryvreckan/jobsub/example.geo"
-histogramFile = "histograms.root"
-
-number_of_events = 1000000
-
-[Metronome]
-eventLength = 20us
-
-[EventLoaderTimepix3]
-inputDirectory = "/eos/experiment/clicdp/grid/ilc/user/c/clictel/CERN_TB_November_2018/data/@RunNumber@"
-inputDirectory = "/eos/experiment/clicdp/grid/ilc/user/c/clictel/CERN_TB_November_2018/data/Run29674"
-
-[EventLoaderATLASpix]
-inputDirectory = "/eos/experiment/clicdp/grid/ilc/user/c/clictel/CERN_TB_November_2018/atlaspix/Run29674"
-log_level = "INFO"
-clockCycle = 8ns # 125 MHz
-clkdivend2 = 15
-
-[Clustering4D]
-
-[TestAlgorithm]
-log_level=INFO
-makeCorrelations=true
-timingCut=2ms
-
-[Tracking4D]
-minHitsOnTrack=6 # was 3
-spatialCut=200um # default 200um
-
-[DUTAssociation]
-timingCut = 500ns #default 200ns
-spatialCut = 300um, 150um
-
-[AnalysisDUT]
-
-[AnalysisEfficiency]
-log_level = "STATUS"
\ No newline at end of file

jobsub/example.geo

-[W0013_D04]
-number_of_pixels = 256,256
-orientation = 9.94299deg,187.403deg,-1.36501deg
-orientation_mode = "xyz"
-pixel_pitch = 55um,55um
-position = 939.743um,285.05um,0
-resolution = 4um,4um
-type = "Timepix3"
-
-[W0013_E03]
-number_of_pixels = 256,256
-orientation = 10.3292deg,187.515deg,-1.08977deg
-orientation_mode = "xyz"
-pixel_pitch = 55um,55um
-position = -240.315um,405.685um,21.5mm
-resolution = 4um,4um
-type = "Timepix3"
-
-[W0013_G02]
-number_of_pixels = 256,256
-orientation = 9.72705deg,187.911deg,-1.65648deg
-orientation_mode = "xyz"
-pixel_pitch = 55um,55um
-position = 49.013um,386.567um,43.5mm
-resolution = 4um,4um
-type = "Timepix3"
-
-[ap1b02w23s15]
-number_of_pixels = 25,400
-orientation = -0.0124905deg,0.0684685deg,-0.52609deg
-orientation_mode = "xyz"
-pixel_pitch = 130um,40um
-position = 335.278um,-1.55396mm,105mm
-resolution = 40um,10um
-role = "dut"
-type = "ATLASpix"
-roi = [5,100], [5, 380], [20, 380], [20, 100]
-#mask_file = "test.mask"
-
-[W0013_G03]
-number_of_pixels = 256,256
-orientation = 8.99876deg,8.99412deg,-0.0178763deg
-orientation_mode = "xyz"
-pixel_pitch = 55um,55um
-position = -10.202um,-11.943um,186.5mm
-resolution = 4um,4um
-role = "reference"
-type = "Timepix3"
-
-[W0013_J05]
-number_of_pixels = 256,256
-orientation = 7.60819deg,9.72865deg,1.17027deg
-orientation_mode = "xyz"
-pixel_pitch = 55um,55um
-position = 455.423um,-578.822um,231.5mm
-resolution = 4um,4um
-type = "Timepix3"
-
-[W0013_L09]
-number_of_pixels = 256,256
-orientation = 6.66436deg,10.288deg,-0.387377deg
-orientation_mode = "xyz"
-pixel_pitch = 55um,55um
-position = -938.126um,28.775um,336.5mm
-resolution = 4um,4um
-type = "Timepix3"

jobsub/example.sub

-output                  = log/corryvreckan.$(ClusterId).$(ProcId).out
-error                   = log/corryvreckan.$(ClusterId).$(ProcId).err
-log                     = log/corryvreckan.$(ClusterId).log
-should_transfer_files   = Yes
-when_to_transfer_output = ON_EXIT
-transfer_output_files   = output/histograms.root
-#transfer_output_remaps  = "output/histograms.root = histograms_$(ClusterId).$(ProcId).root"
-getenv                  = True
-queue
\ No newline at end of file