SGE submission hangs and waits indefinitely
During the job submission through
subprocess.run() the code hangs.
Also the configuration has to be carefully inspected for the input/output and configuration paths.
The SGE worker should be able to write to those locations.
Steps to reproduce
Submit the job with the SGE config from the repository
What is the expected correct behavior?
The submitter should return the job id and cleanly exit
Relevant logs and/or screenshots
- Version used: head of master
- Operation System: slc6, camk