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Mamartin fixnightly 14mar2017b

Maurizio Martinelli requested to merge mamartin-fixnightly-14mar2017b into master

Fixed compilation warnings with gcc49.

Most of the time they depended on virtual functions definitions where the lookup was not working correctly for the inherited class (corrected with using Parent::functionName). In one case I had to add an override.

Finally a couple of functions were not used. One was commented out in OTCalibration. The other was replacestring in TAlignment that, if needed, can be replaced by the corresponding boost or STL function.

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