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Commit f9070406 authored by Lennart Huth's avatar Lennart Huth
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updates

parents d61dee40 aeabbca5
Pipeline #3481046 failed with stages
in 36 minutes and 53 seconds
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.gitlab-ci.yml
View file @ f9070406
......@@ -24,6 +24,7 @@ stages:
script:
- mkdir build
- cd build
- export CCACHE_DIR=`pwd`/ccache
- cmake -GNinja -DCMAKE_CXX_FLAGS="-Werror" -DCMAKE_BUILD_TYPE=RELEASE -DROOT_DIR=$ROOTSYS -DEigen3_DIR=$Eigen3_DIR ..
- ninja -k0
- ninja install
......@@ -58,17 +59,14 @@ cmp:lxplus-gcc:
- export COMPILER_TYPE="gcc"
- source etc/setup_lxplus.sh
cmp:cc7-docker:
cmp:docker:
extends: .compile
image:
name: gitlab-registry.cern.ch/corryvreckan/corryvreckan/corryvreckan-deps
entrypoint: [""]
before_script:
- source scl_source enable devtoolset-8 || echo " "
script:
- mkdir build
- cd build
- cmake3 -DCMAKE_CXX_FLAGS="-Werror" -DBUILD_EventLoaderEUDAQ2=ON -DBUILD_EventDefinitionM26=ON -DCMAKE_BUILD_TYPE=RELEASE -DROOT_DIR=$ROOTSYS -DEigen3_DIR=$Eigen3_DIR -Deudaq_DIR=/opt/eudaq2/cmake ..
- cmake -DCMAKE_CXX_FLAGS="-Werror" -DBUILD_EventLoaderEUDAQ2=ON -DBUILD_EventDefinitionM26=ON -DCMAKE_BUILD_TYPE=RELEASE -DROOT_DIR=$ROOTSYS -DEigen3_DIR=$Eigen3_DIR -Deudaq_DIR=/opt/eudaq2/cmake ..
- make
- make install
......@@ -103,13 +101,10 @@ cmp:mac1015-clang:
tags:
- docker
needs:
- job: cmp:cc7-docker
- job: cmp:docker
artifacts: true
image:
name: gitlab-registry.cern.ch/corryvreckan/corryvreckan/corryvreckan-deps
entrypoint: [""]
before_script:
- source scl_source enable devtoolset-8 || echo " "
after_script:
- ./.gitlab/ci/transform_ctest_junit.py build/Testing/`head -n 1 build/Testing/TAG`/Test.xml .gitlab/ci/ctest-to-junit.xsl corry-${CI_JOB_NAME}-${CI_COMMIT_REF_NAME}.xml
artifacts:
......@@ -254,6 +249,7 @@ cmp:usermanual:
- schedules@corryvreckan/corryvreckan
before_script:
- export COMPILER_TYPE="gcc"
- export CCACHE_DIR=`pwd`/ccache
- source .gitlab/ci/init_x86_64.sh
- source .gitlab/ci/load_deps.sh
script:
......
.gitlab/ci/init_x86_64.sh
View file @ f9070406
......@@ -5,7 +5,7 @@ if [ "$(uname)" = "Linux" ]; then
if [ "$( cat /etc/*-release | grep "CentOS Linux 7" )" ]; then
echo "Detected CentOS Linux 7"
OS=centos7
elif [ "$( cat /etc/*-release | grep "CentOS Linux 8" )" ]; then
elif [ "$( cat /etc/*-release | grep "CentOS Linux 8" )" ] || [ "$( cat /etc/*-release | grep "CentOS Stream release 8" )" ]; then
echo "Detected CentOS Linux 8"
OS=centos8
else
......@@ -15,7 +15,9 @@ if [ "$(uname)" = "Linux" ]; then
elif [ "$(uname)" = "Darwin" ]; then
MACOS_MAJOR=$(sw_vers -productVersion | awk -F '.' '{print $1}')
MACOS_MINOR=$(sw_vers -productVersion | awk -F '.' '{print $2}')
if [ $MACOS_MAJOR = "11" ] || [ "${MACOS_MAJOR}.${MACOS_MINOR}" = "10.15" ]; then
if [ $MACOS_MAJOR = "11" ]; then
OS=mac11
elif [ "${MACOS_MAJOR}.${MACOS_MINOR}" = "10.15" ]; then
OS=mac1015
else
echo "Unsupported version of macOS ${MACOS_MAJOR}.${MACOS_MINOR}"
......@@ -28,7 +30,7 @@ fi
# Determine is you have CVMFS installed
CVMFS_MOUNT=""
if [ "$OS" = mac1015 ]; then
if [ "$OS" = mac1015 ] || [ "$OS" = mac11 ] ; then
CVMFS_MOUNT="/Users/Shared"
fi
......@@ -48,7 +50,7 @@ fi
# Determine which LCG version to use
DEFAULT_LCG="LCG_99"
DEFAULT_LCG="LCG_101"
if [ -z ${ALLPIX_LCG_VERSION} ]; then
echo "No explicit LCG version set, using ${DEFAULT_LCG}."
......@@ -66,14 +68,14 @@ if [ -z ${COMPILER_TYPE} ]; then
fi
fi
if [ ${COMPILER_TYPE} = "gcc" ]; then
COMPILER_VERSION="gcc10"
COMPILER_VERSION="gcc11"
echo "Compiler type set to GCC, version ${COMPILER_VERSION}."
fi
if [ ${COMPILER_TYPE} = "llvm" ]; then
if [ "$(uname)" = "Darwin" ]; then
COMPILER_VERSION="clang120"
else
COMPILER_VERSION="clang10"
COMPILER_VERSION="clang12"
fi
echo "Compiler type set to LLVM, version ${COMPILER_VERSION}."
fi
......
3rdparty/GeneralBrokenLines/CMakeLists.txt
View file @ f9070406
......@@ -2,7 +2,7 @@
CMAKE_MINIMUM_REQUIRED( VERSION 3.1 )
# declare the project name
PROJECT(GBL VERSION "2.2.0")
PROJECT(GBL VERSION "2.4.0")
# project version
# SET( ${PROJECT_NAME}_VERSION_MAJOR 2 )
......
3rdparty/GeneralBrokenLines/include/BorderedBandMatrix.h
View file @ f9070406
......@@ -78,6 +78,7 @@ namespace gbl {
BorderedBandMatrix();
virtual ~BorderedBandMatrix();
void resize(unsigned int nSize, unsigned int nBorder = 1, unsigned int nBand = 5);
void setZero();
void solveAndInvertBorderedBand(const VVector& aRightHandSide, VVector& aSolution);
void addBlockMatrix(double aWeight, const std::vector<unsigned int>* anIndex, const std::vector<double>* aVector);
void addBlockMatrix(double aWeight, unsigned int nSimple, unsigned int* anIndex, double* aVector);
......@@ -100,5 +101,5 @@ namespace gbl {
VMatrix invertBand();
VMatrix bandOfAVAT(const VMatrix& anArray, const VSymMatrix& aSymArray) const;
};
}
} // namespace gbl
#endif /* BORDEREDBANDMATRIX_H_ */
3rdparty/GeneralBrokenLines/include/GblData.h
View file @ f9070406
......@@ -13,7 +13,7 @@
*
*
* \copyright
* Copyright (c) 2011 - 2016 Deutsches Elektronen-Synchroton,
* Copyright (c) 2011 - 2021 Deutsches Elektronen-Synchroton,
* Member of the Helmholtz Association, (DESY), HAMBURG, GERMANY \n\n
* This library is free software; you can redistribute it and/or modify
* it under the terms of the GNU Library General Public License as
......@@ -57,10 +57,11 @@ namespace gbl {
public:
GblData(unsigned int aLabel,
dataBlockType aType,
double aMeas,
double aValue,
double aPrec,
unsigned int aTraj = 0,
unsigned int aPoint = 0);
unsigned int aPoint = 0,
unsigned int aMeas = 0);
GblData(const GblData&) = default;
GblData& operator=(const GblData&) = default;
GblData(GblData&&) = default;
......@@ -114,7 +115,6 @@ namespace gbl {
void printData() const;
unsigned int getLabel() const;
dataBlockType getType() const;
unsigned int getNumSimple() const;
void
getLocalData(double& aValue, double& aWeight, unsigned int& numLocal, unsigned int*& indLocal, double*& derLocal);
void getAllData(double& aValue,
......@@ -124,6 +124,7 @@ namespace gbl {
double*& derLocal,
unsigned int& aTraj,
unsigned int& aPoint,
unsigned int& aMeas,
unsigned int& aRow);
void getResidual(double& aResidual,
double& aVariance,
......@@ -131,6 +132,7 @@ namespace gbl {
unsigned int& numLocal,
unsigned int*& indLocal,
double*& derLocal);
void getResidual(double& aResidual, double& aVariance);
private:
unsigned int theLabel; ///< Label (of corresponding point)
......@@ -140,6 +142,7 @@ namespace gbl {
double thePrecision; ///< Precision (1/sigma**2)
unsigned int theTrajectory; ///< Trajectory number
unsigned int thePoint; ///< Point number (on trajectory)
unsigned int theMeas; ///< Measurement number (at point)
unsigned int theDWMethod; ///< Down-weighting method (0: None, 1: Tukey, 2: Huber, 3: Cauchy)
double theDownWeight; ///< Down-weighting factor (0-1)
double thePrediction; ///< Prediction from fit
......@@ -262,6 +265,7 @@ namespace gbl {
}
}
}
}
} // namespace gbl
#endif /* GBLDATA_H_ */
3rdparty/GeneralBrokenLines/include/GblMeasurement.h 0 → 100644
View file @ f9070406
/*
* GblMeasurement.h
*
* Created on: 31 Mar 2021
* Author: kleinwrt
*/
/** \file
* GblMeasurement (with optional derivatives) definition.
*
* \author Claus Kleinwort, DESY, 2021 (Claus.Kleinwort@desy.de)
*
*
* \copyright
* Copyright (c) 2021 Deutsches Elektronen-Synchroton,
* Member of the Helmholtz Association, (DESY), HAMBURG, GERMANY \n\n
* This library is free software; you can redistribute it and/or modify
* it under the terms of the GNU Library General Public License as
* published by the Free Software Foundation; either version 2 of the
* License, or (at your option) any later version. \n\n
* This library is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Library General Public License for more details. \n\n
* You should have received a copy of the GNU Library General Public
* License along with this program (see the file COPYING.LIB for more
* details); if not, write to the Free Software Foundation, Inc.,
* 675 Mass Ave, Cambridge, MA 02139, USA.
*/
#ifndef GBLMEASUREMENT_H_
#define GBLMEASUREMENT_H_
#include <array>
#include <iostream>
#include <math.h>
#include <vector>
#include "VMatrix.h"
#ifdef GBL_EIGEN_SUPPORT_ROOT
#include "TMatrixD.h"
#include "TMatrixDSym.h"
#include "TMatrixDSymEigen.h"
#include "TVectorD.h"
#endif
#include "Eigen/Dense"
namespace gbl {
typedef Eigen::Matrix<double, 5, 1> Vector5d;
typedef Eigen::Matrix<double, 2, 3> Matrix23d;
typedef Eigen::Matrix<double, 2, 5> Matrix25d;
typedef Eigen::Matrix<double, 2, 7> Matrix27d;
typedef Eigen::Matrix<double, 3, 2> Matrix32d;
typedef Eigen::Matrix<double, 5, 5> Matrix5d;
/// Measurement at point.
/**
* User supplied measurement at point on (initial) trajectory.
*
* Must have measurement (1D - 5D). May have:
*
* -# Additional local parameters (with derivatives). Fitted together with track parameters.
* -# Additional global parameters (with labels and derivatives). Not fitted, only passed
* on to (binary) file for fitting with Millepede-II.
*/
class GblMeasurement {
public:
GblMeasurement(const Eigen::MatrixXd& aProjection,
const Eigen::VectorXd& aResiduals,
const Eigen::MatrixXd& aPrecision,
double minPrecision = 0.);
GblMeasurement(const Eigen::VectorXd& aResiduals, const Eigen::MatrixXd& aPrecision, double minPrecision = 0.);
GblMeasurement(const GblMeasurement&) = default;
GblMeasurement& operator=(const GblMeasurement&) = default;
GblMeasurement(GblMeasurement&&) = default;
GblMeasurement& operator=(GblMeasurement&&) = default;
virtual ~GblMeasurement();
#ifdef GBL_EIGEN_SUPPORT_ROOT
// input via ROOT
GblMeasurement(const TMatrixD& aProjection,
const TVectorD& aResiduals,
const TVectorD& aPrecision,
double minPrecision = 0.);
GblMeasurement(const TMatrixD& aProjection,
const TVectorD& aResiduals,
const TMatrixDSym& aPrecision,
double minPrecision = 0.);
GblMeasurement(const TVectorD& aResiduals, const TVectorD& aPrecision, double minPrecision = 0.);
GblMeasurement(const TVectorD& aResiduals, const TMatrixDSym& aPrecision, double minPrecision = 0.);
void addLocals(const TMatrixD& aDerivatives);
void addGlobals(const std::vector<int>& aLabels, const TMatrixD& aDerivatives);
#endif
// input via Eigen
void addLocals(const Eigen::MatrixXd& aDerivatives);
void addGlobals(const std::vector<int>& aLabels, const Eigen::MatrixXd& aDerivatives);
void setEnabled(bool flag);
bool isEnabled() const;
unsigned int getMeasDim() const;
double getMeasPrecMin() const;
void getMeasurement(Matrix5d& aProjection, Vector5d& aResiduals, Vector5d& aPrecision) const;
void getMeasTransformation(Eigen::MatrixXd& aTransformation) const;
unsigned int getNumLocals() const;
const Eigen::MatrixXd& getLocalDerivatives() const;
unsigned int getNumGlobals() const;
void printMeasurement(unsigned int level = 0) const;
void getGlobalLabels(std::vector<int>& aLabels) const;
void getGlobalDerivatives(Eigen::MatrixXd& aDerivatives) const;
void
getGlobalLabelsAndDerivatives(unsigned int aRow, std::vector<int>& aLabels, std::vector<double>& aDerivatives) const;
private:
bool enabled; ///< Enabled flag (to be used)
unsigned int measDim; ///< Dimension of measurement (1-5), 0 indicates absence of measurement
double measPrecMin; ///< Minimal measurement precision (for usage)
Matrix5d measProjection; ///< Projection from measurement to local system
Vector5d measResiduals; ///< Measurement residuals
Vector5d measPrecision; ///< Measurement precision (diagonal of inverse covariance matrix)
bool transFlag; ///< Transformation exists?
Eigen::Matrix<double, Eigen::Dynamic, Eigen::Dynamic, Eigen::ColMajor /* default */, 5, 5>
measTransformation; ///< Transformation of diagonalization (of meas. precision matrix)
Eigen::MatrixXd localDerivatives; ///< Derivatives of measurement vs additional local (fit) parameters
std::vector<int> globalLabels; ///< Labels of global (MP-II) derivatives
Eigen::MatrixXd globalDerivatives; ///< Derivatives of measurement vs additional global (MP-II) parameters
};
} // namespace gbl
#endif /* GBLMEASUREMENT_H_ */
3rdparty/GeneralBrokenLines/include/GblPoint.h
View file @ f9070406
......@@ -13,7 +13,7 @@
*
*
* \copyright
* Copyright (c) 2011 - 2017 Deutsches Elektronen-Synchroton,
* Copyright (c) 2011 - 2021 Deutsches Elektronen-Synchroton,
* Member of the Helmholtz Association, (DESY), HAMBURG, GERMANY \n\n
* This library is free software; you can redistribute it and/or modify
* it under the terms of the GNU Library General Public License as
......@@ -32,16 +32,12 @@
#ifndef GBLPOINT_H_
#define GBLPOINT_H_
#include "GblMeasurement.h"
#include <iostream>
#include <math.h>
#include <stdexcept>
#include <vector>
#ifdef GBL_EIGEN_SUPPORT_ROOT
#include "TMatrixD.h"
#include "TMatrixDSym.h"
#include "TMatrixDSymEigen.h"
#include "TVectorD.h"
#endif
#include "Eigen/Dense"
......@@ -60,15 +56,12 @@ namespace gbl {
*
* Must have jacobian for propagation from previous point. May have:
*
* -# Measurement (1D - 5D)
* -# Measurement(s) (1D - 5D)
* -# Scatterer (thin, 2D kinks)
* -# Additional local parameters (with derivatives). Fitted together with track parameters.
* -# Additional global parameters (with labels and derivatives). Not fitted, only passed
* on to (binary) file for fitting with Millepede-II.
*/
class GblPoint {
public:
GblPoint(const Matrix5d& aJacobian);
GblPoint(const Matrix5d& aJacobian, unsigned int numMeasReserve = 0);
GblPoint(const GblPoint&) = default;
GblPoint& operator=(const GblPoint&) = default;
GblPoint(GblPoint&&) = default;
......@@ -103,9 +96,7 @@ namespace gbl {
* \tparam Residuals Residuals vector
* \tparam Precision Precision matrix or vector (with diagonal)
* \param [in] aProjection Projection from local to measurement system (derivative of measurement vs local
* parameters)
* \param [in] aResiduals Measurement residuals
* \param [in] aPrecision Measurement precision (matrix)
* parameters) \param [in] aResiduals Measurement residuals \param [in] aPrecision Measurement precision (matrix)
* \param [in] minPrecision Minimal precision to accept measurement
*/
template <typename Projection,
......@@ -125,10 +116,8 @@ namespace gbl {
* \tparam Residuals Residuals vector
* \tparam Precision Precision matrix or vector (with diagonal)
* \param [in] aProjection Projection from local to measurement system (derivative of measurement vs local
* parameters)
* \param [in] aResiduals Measurement residuals
* \param [in] aPrecision Measurement precision (vector with diagonal)
* \param [in] minPrecision Minimal precision to accept measurement
* parameters) \param [in] aResiduals Measurement residuals \param [in] aPrecision Measurement precision (vector with
* diagonal) \param [in] minPrecision Minimal precision to accept measurement
*/
template <typename Projection,
typename Residuals,
......@@ -232,25 +221,21 @@ namespace gbl {
*/
void addGlobals(const std::vector<int>& aLabels, const Eigen::MatrixBase<Derivative>& aDerivatives);
//
unsigned int hasMeasurement() const;
double getMeasPrecMin() const;
void getMeasurement(Matrix5d& aProjection, Vector5d& aResiduals, Vector5d& aPrecision) const;
void getMeasTransformation(Eigen::MatrixXd& aTransformation) const;
unsigned int numMeasurements() const;
bool hasScatterer() const;
void getScatterer(Eigen::Matrix2d& aTransformation, Eigen::Vector2d& aResiduals, Eigen::Vector2d& aPrecision) const;
void getScatTransformation(Eigen::Matrix2d& aTransformation) const;
unsigned int getNumLocals() const;
const Eigen::MatrixXd& getLocalDerivatives() const;
unsigned int getNumGlobals() const;
void getGlobalLabels(std::vector<int>& aLabels) const;
void getGlobalDerivatives(Eigen::MatrixXd& aDerivatives) const;
void
getGlobalLabelsAndDerivatives(unsigned int aRow, std::vector<int>& aLabels, std::vector<double>& aDerivatives) const;
unsigned int getLabel() const;
int getOffset() const;
const Matrix5d& getP2pJacobian() const;
void getDerivatives(int aDirection, Eigen::Matrix2d& matW, Eigen::Matrix2d& matWJ, Eigen::Vector2d& vecWd) const;
void printPoint(unsigned int level = 0) const;
std::vector<GblMeasurement>::iterator getMeasBegin();
std::vector<GblMeasurement>::iterator getMeasEnd();
void getGlobalLabelsAndDerivatives(unsigned int aMeas,
unsigned int aRow,
std::vector<int>& aLabels,
std::vector<double>& aDerivatives) const;
private:
friend class GblTrajectory; // to have the following setters private
......@@ -259,27 +244,16 @@ namespace gbl {
void addPrevJacobian(const Matrix5d& aJac);
void addNextJacobian(const Matrix5d& aJac);
unsigned int theLabel; ///< Label identifying point
int theOffset; ///< Offset number at point if not negative (else interpolation needed)
Matrix5d p2pJacobian; ///< Point-to-point jacobian from previous point
Matrix5d prevJacobian; ///< Jacobian to previous scatterer (or first measurement)
Matrix5d nextJacobian; ///< Jacobian to next scatterer (or last measurement)
unsigned int measDim; ///< Dimension of measurement (1-5), 0 indicates absence of measurement
double measPrecMin; ///< Minimal measurement precision (for usage)
Matrix5d measProjection; ///< Projection from measurement to local system
Vector5d measResiduals; ///< Measurement residuals
Vector5d measPrecision; ///< Measurement precision (diagonal of inverse covariance matrix)
bool transFlag; ///< Transformation exists?
Eigen::Matrix<double, Eigen::Dynamic, Eigen::Dynamic, Eigen::ColMajor /* default */, 5, 5>
measTransformation; ///< Transformation of diagonalization (of meas. precision matrix)
bool scatFlag; ///< Scatterer present?
Eigen::Matrix2d scatTransformation; ///< Transformation of diagonalization (of scat. precision matrix)
Eigen::Vector2d scatResiduals; ///< Scattering residuals (initial kinks if iterating)
Eigen::Vector2d scatPrecision; ///< Scattering precision (diagonal of inverse covariance matrix)
Eigen::MatrixXd localDerivatives; ///< Derivatives of measurement vs additional local (fit) parameters
std::vector<int> globalLabels; ///< Labels of global (MP-II) derivatives
Eigen::MatrixXd globalDerivatives; ///< Derivatives of measurement vs additional global (MP-II) parameters
unsigned int theLabel; ///< Label identifying point
int theOffset; ///< Offset number at point if not negative (else interpolation needed)
Matrix5d p2pJacobian; ///< Point-to-point jacobian from previous point
Matrix5d prevJacobian; ///< Jacobian to previous scatterer (or first measurement)
Matrix5d nextJacobian; ///< Jacobian to next scatterer (or last measurement)
bool scatFlag; ///< Scatterer present?
Eigen::Matrix2d scatTransformation; ///< Transformation of diagonalization (of scat. precision matrix)
Eigen::Vector2d scatResiduals; ///< Scattering residuals (initial kinks if iterating)
Eigen::Vector2d scatPrecision; ///< Scattering precision (diagonal of inverse covariance matrix)
std::vector<GblMeasurement> theMeasurements; ///< List of measurements at point
};
template <typename Projection,
......@@ -303,15 +277,7 @@ namespace gbl {
"addMeasurement: rows(Precision) and cols(Precision) must be equal");
static_assert(static_cast<int>(Projection::RowsAtCompileTime) == static_cast<int>(Projection::ColsAtCompileTime),
"addMeasurement: rows(Projection) and cols(Projection) must be equal");
measDim = aResiduals.rows();
measPrecMin = minPrecision;
// arbitrary precision matrix
Eigen::SelfAdjointEigenSolver<typename Precision::PlainObject> measEigen{aPrecision};
measTransformation = measEigen.eigenvectors().transpose();
transFlag = true;
measResiduals.tail(measDim) = measTransformation * aResiduals;
measPrecision.tail(measDim) = measEigen.eigenvalues();
measProjection.bottomRightCorner(measDim, measDim) = measTransformation * aProjection;
theMeasurements.emplace_back(aProjection, aResiduals, aPrecision, minPrecision);
}
template <typename Projection,
......@@ -333,12 +299,8 @@ namespace gbl {
"addMeasurement: rows(Residuals) and rows(Projection) must be equal");
static_assert(static_cast<int>(Projection::RowsAtCompileTime) == static_cast<int>(Projection::ColsAtCompileTime),
"addMeasurement: rows(Projection) and cols(Projection) must be equal");
measDim = aResiduals.rows();
measPrecMin = minPrecision;
// diagonal precision matrix
measResiduals.tail(measDim) = aResiduals;
measPrecision.tail(measDim) = aPrecision;
measProjection.bottomRightCorner(measDim, measDim) = aProjection;
// theMeasurements.push_back(GblMeasurement(aProjection, aResiduals, aPrecision, minPrecision));
theMeasurements.emplace_back(aProjection, aResiduals, aPrecision, minPrecision);
}
template <typename Residuals, typename Precision, typename std::enable_if<(Precision::ColsAtCompileTime != 1)>::type*>
......@@ -352,15 +314,7 @@ namespace gbl {
"addMeasurement: rows(Residuals) must be 1-5 or dynamic");
static_assert(static_cast<int>(Residuals::RowsAtCompileTime) == static_cast<int>(Precision::RowsAtCompileTime),
"addMeasurement: rows(Residuals) and rows(Precision) must be equal");
measDim = aResiduals.rows();
measPrecMin = minPrecision;
// arbitrary precision matrix
Eigen::SelfAdjointEigenSolver<typename Precision::PlainObject> measEigen{aPrecision};
measTransformation = measEigen.eigenvectors().transpose();
transFlag = true;
measResiduals.tail(measDim) = measTransformation * aResiduals;
measPrecision.tail(measDim) = measEigen.eigenvalues();
measProjection.bottomRightCorner(measDim, measDim) = measTransformation;
theMeasurements.emplace_back(aResiduals, aPrecision, minPrecision);
}
template <typename Residuals, typename Precision, typename std::enable_if<(Precision::ColsAtCompileTime == 1)>::type*>
......@@ -374,12 +328,7 @@ namespace gbl {
"addMeasurement: rows(Residuals) must be 1-5 or dynamic");
static_assert(static_cast<int>(Residuals::RowsAtCompileTime) == static_cast<int>(Precision::RowsAtCompileTime),
"addMeasurement: rows(Residuals) and rows(Precision) must be equal");
measDim = aResiduals.rows();
measPrecMin = minPrecision;
// diagonal precision matrix
measResiduals.tail(measDim) = aResiduals;
measPrecision.tail(measDim) = aPrecision;
measProjection.setIdentity();
theMeasurements.emplace_back(aResiduals, aPrecision, minPrecision);
}
template <typename Precision, typename std::enable_if<(Precision::ColsAtCompileTime == 2)>::type*>
......@@ -408,27 +357,15 @@ namespace gbl {
}
template <typename Derivative> void GblPoint::addLocals(const Eigen::MatrixBase<Derivative>& aDerivatives) {
if(measDim) {
localDerivatives.resize(aDerivatives.rows(), aDerivatives.cols());
if(transFlag) {
localDerivatives = measTransformation * aDerivatives;
} else {
localDerivatives = aDerivatives;
}
}
if(theMeasurements.size())
theMeasurements.back().addLocals(aDerivatives);
}
template <typename Derivative>
void GblPoint::addGlobals(const std::vector<int>& aLabels, const Eigen::MatrixBase<Derivative>& aDerivatives) {
if(measDim) {
globalLabels = aLabels;
globalDerivatives.resize(aDerivatives.rows(), aDerivatives.cols());
if(transFlag) {
globalDerivatives = measTransformation * aDerivatives;
} else {
globalDerivatives = aDerivatives;
}
}
if(theMeasurements.size())
theMeasurements.back().addGlobals(aLabels, aDerivatives);
}
}
} // namespace gbl
#endif /* GBLPOINT_H_ */
3rdparty/GeneralBrokenLines/include/GblTrajectory.h
View file @ f9070406
......@@ -13,7 +13,7 @@
*
*
* \copyright
* Copyright (c) 2011 - 2018 Deutsches Elektronen-Synchroton,
* Copyright (c) 2011 - 2021 Deutsches Elektronen-Synchroton,
* Member of the Helmholtz Association, (DESY), HAMBURG, GERMANY \n\n
* This library is free software; you can redistribute it and/or modify
* it under the terms of the GNU Library General Public License as
......@@ -84,10 +84,9 @@ namespace gbl {
* \tparam Measurements Residuals vector
* \tparam Precision Precision matrix or vector (with diagonal)
* \param [in] aPointsAndTransList List containing pairs with list of points and transformation (at inner (first)
* point)
* \param [in] extDerivatives Derivatives of external measurements vs external parameters
* \param [in] extMeasurements External measurements (residuals)
* \param [in] extPrecisions Precision of external measurements (matrix)
* point) \param [in] extDerivatives Derivatives of external measurements vs external parameters \param [in]
* extMeasurements External measurements (residuals) \param [in] extPrecisions Precision of external measurements
* (matrix)
*/
template <typename Derivatives,
typename Measurements,
......@@ -101,17 +100,15 @@ namespace gbl {
/// Create new composed trajectory from list of points and transformations with independent external measurements.
/**
* Composed of curved trajectories in space. The (diagonal) precision matrix for the external measurements is
* specified as vector
* (containing the diagonal).
* specified as vector (containing the diagonal).
*
* \tparam Derivatives External derivatives
* \tparam Measurements Residuals vector
* \tparam Precision Precision matrix or vector (with diagonal)
* \param [in] aPointsAndTransList List containing pairs with list of points and transformation (at inner (first)
* point)
* \param [in] extDerivatives Derivatives of external measurements vs external parameters
* \param [in] extMeasurements External measurements (residuals)
* \param [in] extPrecisions Precision of external measurements (vector with diagonal)
* point) \param [in] extDerivatives Derivatives of external measurements vs external parameters \param [in]