diff --git a/Trigger/TrigAlgorithms/TrigmuComb/python/TrigmuCombConfig_newJO.py b/Trigger/TrigAlgorithms/TrigmuComb/python/TrigmuCombConfig_newJO.py
index d23189846ac2532931f82e2a72100137066a03a6..322877c9e030d2ed7c08eb16f78b30d17e866665 100644
--- a/Trigger/TrigAlgorithms/TrigmuComb/python/TrigmuCombConfig_newJO.py
+++ b/Trigger/TrigAlgorithms/TrigmuComb/python/TrigmuCombConfig_newJO.py
@@ -35,7 +35,7 @@ def muCombCfg(flags, postFix="", useBackExtrp=True):
         idScanEndcap2Res = [0.030, 0.0000002]
         idScanEndcap3Res = [0.036, 0.0000004]
         idScanEndcap4Res = [0.046, 0.0000002]
-
+    from TrigmuComb.TrigmuCombMonitoring import TrigMuCombMonitoring
     muCombMT = CompFactory.muCombMT
     muCombAlg = muCombMT(name                  = "MuComb"+postFix,
                          MuCombStrategy        = 0,
@@ -50,7 +50,7 @@ def muCombCfg(flags, postFix="", useBackExtrp=True):
                          IDSCANEndcap3Res      = idScanEndcap3Res,
                          IDSCANEndcap4Res      = idScanEndcap4Res,
                          IDalgo                = "InDetTrigTrackingxAODCnv_Muon_FTF",
-                         MonTool = None)
+                         MonTool = TrigMuCombMonitoring())
 
     return acc, muCombAlg
 
diff --git a/Trigger/TrigTools/TrigInDetConfig/python/TrigInDetConfig.py b/Trigger/TrigTools/TrigInDetConfig/python/TrigInDetConfig.py
index 9099aac72f957488fae1c25d2a8b21b9606ae71f..7789e424a80bde320f39403af32a973749ff9b59 100644
--- a/Trigger/TrigTools/TrigInDetConfig/python/TrigInDetConfig.py
+++ b/Trigger/TrigTools/TrigInDetConfig/python/TrigInDetConfig.py
@@ -431,7 +431,10 @@ def TrigInDetCondCfg( flags ):
   acc.merge( mfsc )
   return acc
 
-def TrigInDetConfig( flags, roisKey="EMRoIs", signatureName='' ):
+def TrigInDetConfig( inflags, roisKey="EMRoIs", signatureName='' ):
+
+  # redirect InDet.Tracking flags to point to a specific trigger setting
+  flags = inflags.cloneAndReplace("InDet.Tracking", "Trigger.InDetTracking."+signatureName)
 
   #If signature specified add suffix to the name of each algorithms
   signature =  "_" + signatureName if signatureName else ''
@@ -715,13 +718,10 @@ def TrigInDetConfig( flags, roisKey="EMRoIs", signatureName='' ):
 
   return acc
 
-def indetInViewRecoCfg( inflags, viewMakerName, signature='' ):
+def indetInViewRecoCfg( flags, viewMakerName, signature='' ):
   """ TBD if this function should be defined here or moved to the menu are, for sake of symmetry it is kept here now
   There would certainly be additional algorithms
   """
-  # redirect InDet.Tracking flags to point to a specific trigger setting
-  flags = inflags.cloneAndReplace("InDet.Tracking", "Trigger.InDetTracking."+signature)
-
 
   from TriggerMenuMT.HLTMenuConfig.Menu.MenuComponents import InViewReco
   reco = InViewReco( viewMakerName )
diff --git a/Trigger/TrigTools/TrigInDetConfig/python/TrigTrackingCutFlags.py b/Trigger/TrigTools/TrigInDetConfig/python/TrigTrackingCutFlags.py
index 6c9e24bbad58e1d8b58f039a740cc57160502a21..a984bb29856117bc606ac2cc81098aabd404e5b4 100644
--- a/Trigger/TrigTools/TrigInDetConfig/python/TrigTrackingCutFlags.py
+++ b/Trigger/TrigTools/TrigInDetConfig/python/TrigTrackingCutFlags.py
@@ -20,9 +20,15 @@ def __electronFlags():
     flags.checkRedundantSeeds=True
     return flags
 
+def __muonFlags():
+    flags = __sliceFlags()
+    flags.minPT=Units.GeV * 1.0
+    return flags
+
 def createTrigTrackingFlags():
     flags = AthConfigFlags() 
     flags.addFlagsCategory('Trigger.InDetTracking.Electron', __electronFlags, prefix=True)
+    flags.addFlagsCategory('Trigger.InDetTracking.Muon', __muonFlags, prefix=True)
     return flags
 
 if __name__ == "__main__":
diff --git a/Trigger/TriggerCommon/TriggerMenuMT/python/HLTMenuConfig/Muon/generateMuon.py b/Trigger/TriggerCommon/TriggerMenuMT/python/HLTMenuConfig/Muon/generateMuon.py
index a65743bad2dc1c60789ad2e023c118f186a5f8fb..1db8754f0591af5659981532677918d5b9ab171f 100644
--- a/Trigger/TriggerCommon/TriggerMenuMT/python/HLTMenuConfig/Muon/generateMuon.py
+++ b/Trigger/TriggerCommon/TriggerMenuMT/python/HLTMenuConfig/Muon/generateMuon.py
@@ -235,9 +235,7 @@ def generateChains( flags, chainDict ):
         recoL2CB.mergeReco( MuCombViewDataVerifier() )
 
         #ID tracking
-        #(Using electron specific flags for now until muon specific flags are available)
-        flagsID = flags.cloneAndReplace("InDet.Tracking", "Trigger.InDetTracking.Electron")
-        accID = TrigInDetConfig( flagsID, roisKey=recoL2CB.inputMaker().InViewRoIs, signatureName="Muon" )
+        accID = TrigInDetConfig( flags, roisKey=recoL2CB.inputMaker().InViewRoIs, signatureName="Muon" )
         recoL2CB.mergeReco(accID)
         
         accL2CB.merge(recoL2CB, sequenceName = stepL2CBReco.getName())