From dcff3795ff1fbff87899b0bc169f0edaf4678bc1 Mon Sep 17 00:00:00 2001
From: Stefan Schmitt <sschmitt@mail.desy.de>
Date: Tue, 13 Jun 2017 18:12:03 +0000
Subject: [PATCH] Add FTK pattern bank production software to ATLAS
---
Trigger/TrigFTK/TrigFTKBankGen/CMakeLists.txt | 38 +
.../TrigFTKBankGen/FTKBankGenAlgo.h | 284 ++
.../TrigFTKBankGen/FTKCachedBankGenAlgo.h | 71 +
.../TrigFTKBankGen/FTKConstGenAlgo.h | 151 +
.../TrigFTKBankGen/FTKPattGenRoot.h | 157 ++
.../TrigFTKBankGen/FTKPattGenRootAlgo.h | 91 +
.../TrigFTKBankGen/FTKPattKDTree.h | 213 ++
.../TrigFTKBankGen/FTKSectorSlice.h | 115 +
.../TrigFTKBankGen/PattMergeRootAlgo.h | 44 +
.../TrigFTKBankGen/atlparslice_root.h | 65 +
.../TrigFTKBankGen/decodeEtacode.h | 17 +
.../scripts/FTKConstantGen_tf.py | 70 +
.../scripts/FTKMatrixMerge_tf.py | 83 +
.../scripts/FTKMatrixReduction_tf.py | 73 +
.../scripts/FTKPattGenRoot_tf.py | 247 ++
.../share/FTKBankGen_joboptions.py | 323 +++
.../share/FTKCachedBankGen_jobOptions.py | 63 +
...articleGenerator_mu_Pt1to1000_Eta30_FTK.py | 17 +
...cleGenerator_mu_Pt1to1000_Eta30_x10_FTK.py | 21 +
...articleGenerator_pi_Pt1to1000_Eta30_FTK.py | 16 +
...cleGenerator_pi_Pt1to1000_Eta30_x10_FTK.py | 16 +
.../share/PattMergeRoot_jobOptions.py | 85 +
.../bsub_find_extrapolation_relations.py | 22 +
.../make_conn/find_extrapolation_relations.py | 485 ++++
.../find_extrapolation_relations_v2.py | 429 +++
.../generate_connection/make_conn/ftkutils.py | 809 ++++++
.../prep_banks_for_connection_prod.sh | 138 +
.../make_conn/prep_banks_for_simulation.sh | 138 +
.../make_conn/process_conn.sh | 86 +
.../make_conn/tar_extrapolated_gcon.sh | 53 +
.../generate_connection/make_conn/utils.sh | 153 +
...TKBankGenIBL_32TModB_HWMode2_joboptions.py | 109 +
.../r2e_FTKBankGenIBL_32TModB_joboptions.py | 109 +
...TKBankGenIBL_64TModB_HWMode2_joboptions.py | 109 +
.../r2e_FTKBankGenIBL_64TModB_joboptions.py | 109 +
.../r2e_FTKBankGenIBL_HWMode2_joboptions.py | 98 +
...TKBankGenIBL_Run2GEO_32TModB_joboptions.py | 111 +
.../share/r2e_FTKBankGenIBL_joboptions.py | 50 +
.../share/r2e_FTKBankGenITk_joboptions.py | 67 +
.../share/r2e_FTKBankGen_joboptions.py | 108 +
.../share/skeleton.FTKCachedBankGen.py | 91 +
.../share/skeleton.FTKConstantGen.py | 46 +
.../share/skeleton.FTKMatrixMerge.py | 48 +
.../share/skeleton.FTKMatrixReduction.py | 59 +
.../share/skeleton.FTKPattBankGenRoot.py | 192 ++
.../TrigFTKBankGen/src/FTKBankGenAlgo.cxx | 1460 ++++++++++
.../src/FTKCachedBankGenAlgo.cxx | 355 +++
.../TrigFTKBankGen/src/FTKConstGenAlgo.cxx | 2468 +++++++++++++++++
.../TrigFTKBankGen/src/FTKPattGenRoot.cxx | 1059 +++++++
.../TrigFTKBankGen/src/FTKPattGenRootAlgo.cxx | 315 +++
.../TrigFTKBankGen/src/FTKPattKDTree.cxx | 765 +++++
.../TrigFTKBankGen/src/FTKSectorSlice.cxx | 321 +++
.../TrigFTKBankGen/src/PattMergeRootAlgo.cxx | 116 +
.../TrigFTKBankGen/src/atlparslice_root.cxx | 459 +++
.../src/components/TrigFTKBankGen_entries.cxx | 33 +
.../src/components/TrigFTKBankGen_load.cxx | 6 +
.../TrigFTKSim/TrigFTKSim/FTKDetectorTool.h | 2 +
.../TrigFTKSim/TrigFTKSim/FTKDetectorToolI.h | 2 +
.../TrigFTKSim/TrigFTKSim/FTKDumpCondAlgo.h | 2 +
.../TrigFTKSim/scripts/TrigFTKSim_tf.py | 2 +
.../share/FTKDumpCond_8LcIbl123_jobOptions.py | 5 +-
.../share/skeleton.FTKStandaloneSim.py | 22 +-
.../TrigFTKSim/src/FTKDetectorTool.cxx | 40 +
.../TrigFTKSim/src/FTKDumpCondAlgo.cxx | 8 +
.../TrigFTK/TrigFTKSim/src/FTKMergerAlgo.cxx | 19 +-
.../TrigFTKSim/src/FTK_CompressedAMBank.cxx | 29 +-
.../src/components/TrigFTKSim_entries.cxx | 3 +
.../src/components/TrigFTKSim_load.cxx | 3 +
.../TrigFTK/TrigFTKSim/standalone/dataflow.cc | 207 +-
.../TrigFTK/TrigFTKSim/standalone/dataflow.h | 12 +-
70 files changed, 13461 insertions(+), 131 deletions(-)
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/CMakeLists.txt
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKBankGenAlgo.h
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKCachedBankGenAlgo.h
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKConstGenAlgo.h
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattGenRoot.h
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattGenRootAlgo.h
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattKDTree.h
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKSectorSlice.h
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/PattMergeRootAlgo.h
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/atlparslice_root.h
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/decodeEtacode.h
create mode 100755 Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKConstantGen_tf.py
create mode 100755 Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKMatrixMerge_tf.py
create mode 100755 Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKMatrixReduction_tf.py
create mode 100755 Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKPattGenRoot_tf.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/FTKBankGen_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/FTKCachedBankGen_jobOptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_FTK.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_x10_FTK.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_FTK.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_x10_FTK.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/PattMergeRoot_jobOptions.py
create mode 100755 Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/bsub_find_extrapolation_relations.py
create mode 100755 Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/find_extrapolation_relations.py
create mode 100755 Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/find_extrapolation_relations_v2.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/ftkutils.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/prep_banks_for_connection_prod.sh
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/prep_banks_for_simulation.sh
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/process_conn.sh
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/tar_extrapolated_gcon.sh
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/utils.sh
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_32TModB_HWMode2_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_32TModB_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_64TModB_HWMode2_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_64TModB_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_HWMode2_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_Run2GEO_32TModB_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenITk_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGen_joboptions.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKCachedBankGen.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKConstantGen.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKMatrixMerge.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKMatrixReduction.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKPattBankGenRoot.py
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/FTKBankGenAlgo.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/FTKCachedBankGenAlgo.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/FTKConstGenAlgo.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattGenRoot.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattGenRootAlgo.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattKDTree.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/FTKSectorSlice.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/PattMergeRootAlgo.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/atlparslice_root.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/components/TrigFTKBankGen_entries.cxx
create mode 100644 Trigger/TrigFTK/TrigFTKBankGen/src/components/TrigFTKBankGen_load.cxx
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/CMakeLists.txt b/Trigger/TrigFTK/TrigFTKBankGen/CMakeLists.txt
new file mode 100644
index 00000000000..d39311afc5a
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/CMakeLists.txt
@@ -0,0 +1,38 @@
+################################################################################
+# Package: TrigFTKBankGen
+################################################################################
+
+# Declare the package name:
+atlas_subdir( TrigFTKBankGen )
+
+# Declare the package's dependencies:
+atlas_depends_on_subdirs( PUBLIC
+ AtlasPolicy
+ Control/AthenaBaseComps
+ Control/AthenaKernel
+ GaudiKernel
+ Trigger/TrigFTK/TrigFTKSim )
+
+# External dependencies:
+find_package( Boost COMPONENTS filesystem thread system )
+find_package( Eigen )
+find_package( HepPDT )
+find_package( CLHEP )
+find_package( ROOT COMPONENTS Core Tree MathCore Hist RIO pthread )
+find_package( TBB )
+
+add_definitions(-DHAVE_BOOST_IOSTREAMS)
+
+# Component(s) in the package:
+atlas_add_component( TrigFTKBankGen
+ src/*.cxx
+ src/components/*.cxx
+ INCLUDE_DIRS ${Boost_INCLUDE_DIRS} ${ROOT_INCLUDE_DIRS} ${CLHEP_INCLUDE_DIRS} ${EIGEN_INCLUDE_DIRS} ${HEPPDT_INCLUDE_DIRS} ${TBB_INCLUDE_DIRS}
+ LINK_LIBRARIES ${HEPPDT_LIBRARIES} ${ROOT_LIBRARIES} ${CLHEP_LIBRARIES} ${EIGEN_LIBRARIES} ${TBB_LIBRARIES} ${Boost_LIBRARIES} GaudiKernel TrigFTKSimLib )
+
+# Install files from the package:
+atlas_install_headers( TrigFTKBankGen )
+atlas_install_joboptions( share/*job[Oo]ptions.py share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_x10_FTK.py share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_x10_FTK.py share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_FTK.py share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_FTK.py )
+atlas_install_joboptions( share/skeleton.*.py )
+atlas_install_runtime( scripts/*_tf.py )
+
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKBankGenAlgo.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKBankGenAlgo.h
new file mode 100644
index 00000000000..78fd4e1a00e
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKBankGenAlgo.h
@@ -0,0 +1,284 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef FTKBankGenAlgo_h
+#define FTKBankGenAlgo_h
+
+#include "AthenaBaseComps/AthAlgorithm.h"
+
+#include "TrigFTKSim/FTKPMap.h"
+#include "TrigFTKSim/FTKRegionMap.h"
+#include "TrigFTKSim/FTK_SGHitInput.h"
+#include "TrigFTKSim/FTKDataInput.h"
+#include "TrigFTKSim/TrackFitter.h"
+
+#include "TrigFTKBankGen/FTKConstGenAlgo.h"
+
+#include "TTree.h"
+
+#include <string>
+#include <vector>
+#include <ostream>
+#include <cassert>
+#include <fstream>
+#include <bitset>
+
+/////////////////////////////////////////////////////////////////////////////
+class ITHistSvc;
+class TH1F;
+class TH2F;
+
+//TODO prefer FTKHit
+//originally in FTKBankGenAlgo.h
+class filterSecHit{
+ public:
+ int count;
+ int sector;
+ int sector_HW;
+ int plane;
+ int hittype;
+ float dimx;
+ float dimy;
+ int ndim;
+ int CSide;
+ int ASide;
+ FTKHit originalhit;
+};
+
+class matrix{
+ public:
+ double C;
+ double D;
+ double Phi;
+ double Coto;
+ double Z;
+ float nhit;
+};
+
+class FTKBankGenAlgo: public AthAlgorithm {
+public:
+ FTKBankGenAlgo (const std::string& name, ISvcLocator* pSvcLocator);
+ virtual ~FTKBankGenAlgo ();
+ StatusCode initialize();
+ StatusCode execute();
+ StatusCode finalize();
+
+ class StoreGateSvc;
+
+private:
+
+ ITHistSvc *m_thistSvc;
+ StoreGateSvc* m_storeGate;
+ ToolHandle<FTK_SGHitInputI> m_hitInputTool; // input handler
+
+ TFile *file;
+
+ //for ConstGenTest
+ int count_match;
+ int count_pass_filter;
+ double coverage;
+
+ //for event filter
+ int nmuon;
+ double pt,eta,truth_phi;
+
+ int m_nevent;
+ // Number of regions/banks
+ int m_nbanks;
+ int m_nsubregions;
+ int m_nregions;
+
+ int m_verbosity;
+ bool m_BarrelOnly;
+ int m_rawMode;
+ int m_IBLMode; // flag to change the IBLMode
+ bool m_fixEndcapL0;
+ bool m_ITkMode; // flag to use ITk geometry
+
+ // Plane map pointer, to be set during the initialization
+ FTKPlaneMap *m_pmap;
+ FTKPlaneMap *m_pmap_8L;
+
+ // region map used in this session
+ FTKRegionMap *m_rmap;
+
+ int whichRegionAlt(int *sector, FTKRegionMap *rmap);
+
+ std::string m_pmap_path;
+ std::string m_pmap_8L_path;
+
+ std::string m_rmap_path;
+
+ /* the following flags were copied from TrigFTKSim/FTKDataInput.h on 11/02/14 check they are still up to date. Thanks, Guido*/
+ bool m_Clustering; // flag to enable the clustering
+ bool m_SaveClusterContent; // flag to allow the debug of the cluster content
+ bool m_DiagClustering; // true if diagonal clustering is used
+ bool m_SctClustering; // true if SCT clustering is performed
+ unsigned int m_PixelClusteringMode; // 1 means ToT information is used
+ // && 400/600um pixels are accounted for
+ // 0 is default used up to 2013
+ bool m_DuplicateGanged;
+ bool m_GangedPatternRecognition;
+
+
+ bool m_UseIdentifierHash; // if true define a sector as a sequence of identifier hashes
+
+ std::string m_sector_dir_path;//for const test
+ std::string m_gcon_dir_path;//for const test
+ char c_sector_dir_path[200];
+ char c_gcon_dir_path[200];
+
+ int m_nplanes;
+ int TotalDim;
+ int TotalDim2;
+ int *npatterns;
+ int *ntracks;
+ TTree *m_tree[100]; // expanded from 64-->100 to allow for more ITk regions
+
+ TTree *m_slicetree;
+ TTree *m_montree;
+ ULong64_t m_monval[100];
+
+ std::vector <short> int_c,int_phi,int_d0,int_z0,int_eta;
+ std::vector<short> *m_intc;
+ std::vector<short> *m_intphi;
+ std::vector<short> *m_intd0;
+ std::vector<short> *m_intz0;
+ std::vector<short> *m_inteta;
+
+ int m_nc;
+ int m_nphi;
+ int m_nd0;
+ int m_nz0;
+ int m_neta;
+
+ double m_par_c_max;
+ double m_par_c_min;
+ int m_par_c_slices;
+
+ double m_par_phi_max;
+ double m_par_phi_min;
+ int m_par_phi_slices;
+
+ double m_par_d0_max;
+ double m_par_d0_min;
+ int m_par_d0_slices;
+
+ double m_par_z0_max;
+ double m_par_z0_min;
+ int m_par_z0_slices;
+
+ double m_par_eta_max;
+ double m_par_eta_min;
+ int m_par_eta_slices;
+
+ double m_c_max;
+ double m_c_min;
+ int m_c_slices;
+
+ double m_phi_max;
+ double m_phi_min;
+ int m_phi_slices;
+
+ double m_d0_max;
+ double m_d0_min;
+ int m_d0_slices;
+
+ double m_z0_max;
+ double m_z0_min;
+ int m_z0_slices;
+
+ double m_eta_max;
+ double m_eta_min;
+ int m_eta_slices;
+
+
+ // hit information
+ unsigned int nhits;
+ int nsinglemu;
+ std::vector<FTKRawHit> orig_hits;
+ std::vector<FTKTruthTrack> truth_track;
+ std::vector<FTKTruthTrack> m_trainingtracks; // list of good training tracks
+ std::vector<FTKHit> hitslist;//use hit infomation
+ std::map<int, std::vector<FTKHit> > m_maphits;// map of the hits according the barcode
+
+ // definitions of truth track
+ float m_PT_THRESHOLD;
+ int m_TRAIN_PDG;
+
+ int *p_ss;
+ int *p_hashss;
+ double *tmphitc;
+
+ double *tmpxC;
+ double *tmpxD;
+ double *tmpxPhi;
+ double *tmpxCoto;
+ double *tmpxZ;
+ double *tmpcovx;
+
+ int addPattReturnCode;
+
+ //track parameter
+ double x0,y0;
+ double c,d,phi,z0,coto;
+
+ int m_nsector;
+ float m_nhit;
+ // tmp sector and matrix elements
+
+ //TODO vector<int> m_sectorID;
+ int *m_sectorID;
+ int *m_hashID;
+ double* m_tmpVec;
+ double m_tmpC;
+ double m_tmpD;
+ double m_tmpPhi;
+ double m_tmpCoto;
+ double m_tmpZ;
+
+ double *m_tmpxC;
+ double *m_tmpxD;
+ double *m_tmpxPhi;
+ double *m_tmpxCoto;
+ double *m_tmpxZ;
+ double *m_tmpcovx;
+
+ matrix Mtmp;
+
+ //event definitions
+ bool GoodTrack;
+ bool doPattgen;
+
+ int tmp_sectorID;
+ int the_sectorID;
+ int *tmp_ssID; //TODO std::vector<int> tmp_SSID;
+ int *tmp_hashID; //TODO std::vector<int> tmp_SSID;
+
+ //for culcurate resolution
+ double dC;
+ double dD;
+ double dPhi;
+ double dZ0;
+ double dCoto;
+
+ ofstream file_resolution;
+ ofstream file_truthpar;
+ ofstream file_recpar;
+ ofstream file_coverage;
+
+ char str_gcon_file_name[200];
+ char str_sector_file_name[200];
+ string gcon_path;
+
+ FTKTrack base_trk;
+ FTKConstantBank **m_constant; // constant banks
+ bool m_const_test_mode;
+
+ double header[2];
+ double dummy;
+
+ std::bitset<128> m_compsecbitmask;
+};
+
+#endif // FTKBankGenAlgo_h
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKCachedBankGenAlgo.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKCachedBankGenAlgo.h
new file mode 100644
index 00000000000..7225e07cfb9
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKCachedBankGenAlgo.h
@@ -0,0 +1,71 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef FTKCachedBankGenAlgo_h
+#define FTKCachedBankGenAlgo_h
+
+#include "AthenaBaseComps/AthAlgorithm.h"
+#include "GaudiKernel/ServiceHandle.h"
+#include "AthenaKernel/IAtRndmGenSvc.h"
+#include "GaudiKernel/ITHistSvc.h"
+#include <string>
+#include <vector>
+
+/////////////////////////////////////////////////////////////////////////////
+
+class FTKCachedBankGenAlgo: public AthAlgorithm {
+ public:
+ FTKCachedBankGenAlgo(const std::string& name, ISvcLocator* pSvcLocator);
+ virtual ~FTKCachedBankGenAlgo();
+ StatusCode initialize();
+ StatusCode execute();
+ StatusCode finalize();
+ StatusCode RunCachedBankGenerator();
+
+
+protected:
+ std::string m_pmap_path;
+ std::string m_rmap_path;
+ std::string m_modulelut_path =""; // ModuleLUT, required only for HWMODEID=2
+ std::string m_ssmapTSP_path;
+ std::string m_ssmapAM_path;
+
+ // Path of Bank
+ std::string m_in_bank_path;
+ std::string m_in_cache_path;
+ std::string m_out_ccache_path;
+ std::string m_out_pcache_path;
+
+ std::string m_sectordefHW0;
+ std::string m_sectordefHW2;
+
+ int m_hwmodeid_default; // HWMODEID
+ int m_hwmodeid_tspcc; // HWMODEID for sector-ordered and ccache format
+ int m_hwmodeid_dc; // HWMODEID for pcache format
+ int m_curreg; //! Region of interest
+ int m_nSubReg; //! number of subregions
+ int m_iSubReg; //! current subregion
+ int m_verbosity; // for debugging
+ long m_maxpatt; //! max. number of patterns, -1 if no cut is employed
+ int m_IBLMode; //! IBLMode (0: noIBL, 1: with IBL, 2: 3DIBL)
+ bool m_ITkMode; //! ITkMode (0: current geometry, 1: with ITk geometry)
+ std::string m_WhereToRun; //! in which athena step the pattern generation should be run
+ int m_flatFormat;
+
+ std::string m_partitionList;
+ int m_nSectorMax;
+ int m_nLamb;
+
+ int m_ndcMax;
+ std::vector<int> m_ndcMaxPlane;
+ int m_wildcardPenalty;
+ std::vector<int> m_wildcardPenaltyPlane;
+
+ std::string m_badmap_path;
+ std::string m_badmap_path2;
+
+private:
+
+};
+
+#endif // FTKCachedBankGenAlgo_h
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKConstGenAlgo.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKConstGenAlgo.h
new file mode 100644
index 00000000000..be7e5416dc2
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKConstGenAlgo.h
@@ -0,0 +1,151 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef FTKConstGenAlgo_h
+#define FTKConstGenAlgo_h
+
+#include "TrigFTKSim/FTKPMap.h"
+
+#include "AthenaBaseComps/AthAlgorithm.h"
+
+#include "TTree.h"
+
+#include <string>
+#include <vector>
+#include <ostream>
+#include <cassert>
+
+
+class ITHistSvc;
+class TH1F;
+class TH2F;
+#define NPARS 5
+
+/** data structure that contain definition of geometrical
+ constants for linear fits */
+class geo_constants
+{
+ public:
+
+ double *Vd; // impact paramers coefs
+ double *Vc; // curvature coefs
+ double *Vf; // phi coefs
+ double *Vz0; // z0 coefs
+ double *Vo; // cot(theta) coefs
+ double **kernel; // kernel
+ double *kaverages; // averages
+ double Cd; // constant terms for: impact parameter
+ double Cc; // curvature
+ double Cf; // phi
+ double Cz0; // z0
+ double Co; // cot(theta)
+ int real; // this values is greater than 0 if these constants are correctly evaulated
+};
+
+
+class FTKConstGenAlgo: public AthAlgorithm {
+public:
+ FTKConstGenAlgo (const std::string& name, ISvcLocator* pSvcLocator);
+ virtual ~FTKConstGenAlgo ();
+ StatusCode initialize();
+ StatusCode execute();
+ StatusCode finalize();
+
+ class StoreGateSvc;
+
+ private:
+
+ ITHistSvc *m_thistSvc;
+ StoreGateSvc* m_storeGate;
+ bool m_merging;
+ bool m_genconst;
+ bool m_subregion;
+ bool m_extract_1stStage;
+ std::string m_cfpath;
+ std::vector<std::string> m_fpath;
+ std::vector<std::string> m_gfpath;
+ std::vector<std::string> m_sfpath;
+ string m_extractpath;
+
+ std::string m_outfilename; // the algorithm mostly produce a single file, if set this is the name of the file, a default option is otherwise used
+ TFile *file;
+ TFile *good_file;
+ TFile *cfile;
+ TTree *m_ctree;
+
+ bool m_ITkMode; // toggle ITk geometry
+ bool m_allregion;
+ int m_region;
+ int m_nsubregion;
+ int m_nbank;
+ int m_nfile;
+ int addPattReturnCode;
+ float nsector;
+ bool match;
+
+ double pr;
+
+ int nevent;
+
+ int nplane;
+ int nplane8;
+
+ // variables for merge
+ std::vector<short> *m_mergeintc;
+ std::vector<short> *m_mergeintphi;
+ std::vector<short> *m_mergeintd0;
+ std::vector<short> *m_mergeintz0;
+ std::vector<short> *m_mergeinteta;
+
+ // variables for extract 1st stage
+ int plane_index_1st_stage;
+ int plane_index_2nd_stage;
+ int coord_index_1st_stage;
+ int coord_index_2nd_stage;
+ int index_missing_plane;
+ int index_missing_coord;
+
+ std::vector<int> vec_plane_index_1st_stage;
+ std::vector<int> vec_plane_index_2nd_stage;
+ std::vector<int> vec_coord_index_1st_stage;
+ std::vector<int> vec_coord_index_2nd_stage;
+ std::vector<int> vec_doInvert;
+ std::vector<int> vec_ndimension;
+
+ // variables for 12L->8L
+ bool doRelation; // if true, this layer/coords has/have missing layer/coords
+ bool doInvert;// endcap inversion for some SCT layers
+ int inversion;
+ int inversion2;
+
+ std::vector<short> *m_extract_intc;
+ std::vector<short> *m_extract_intphi;
+ std::vector<short> *m_extract_intd0;
+ std::vector<short> *m_extract_intz0;
+ std::vector<short> *m_extract_inteta;
+
+ // Plane map pointer, to be set during the initialization
+ FTKPlaneMap *m_pmap;
+ FTKPlaneMap *m_pmap_8L;
+
+ std::string m_pmap_path;
+ std::string m_pmap_8L_path;
+
+ bool *endcap_inversion; // true if endcap invert stereo and axial layer IDs
+
+ // functions
+ void merge();
+ void constantgen();
+ void extract_1stStage();
+ void make_subregion();
+ int mtx_eigen(int dim, double *mtx_v, double *eigval_v, double *eigvecs_v);
+ int mtx_invert(int dim, double *mtx_v);
+ void nullifyConstants(int sector,int ndim);
+ void sigmad(double *geoconstvect/*, double **marray*/, double **marrayinv,double *v,int dim);
+ float proj(double *vec1, double *vec2, int size);
+ int failedConstants(int sector,int ndim);
+
+};
+
+#endif // FTKConstGenAlgo_h
+
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattGenRoot.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattGenRoot.h
new file mode 100644
index 00000000000..6dc821017a4
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattGenRoot.h
@@ -0,0 +1,157 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef FTKPattGenRoot_h
+#define FTKPattGenRoot_h
+
+/* package FTKPattGenRoot
+ *
+ * Class for merging of patterns stored in root format
+ * For instruction, see FTKPattGenRoot.cxx
+ *
+ */
+
+//#define DEBUG_BEAMSPOT
+
+#ifdef DEBUG_BEAMSPOT
+//#include "EventPrimitives/EventPrimitives.h"
+//#include "GeoPrimitives/GeoPrimitives.h"
+#include "GaudiKernel/ToolHandle.h"
+#include "TrkParameters/TrackParameters.h"
+#include "TrkExInterfaces/IPropagator.h"
+#endif
+
+
+
+
+#include <iostream>
+#include <map>
+#include <vector>
+#include <string>
+#include <inttypes.h>
+#include <TDirectory.h>
+#include "TrigFTKSim/FTKLogging.h"
+#include "TrigFTKSim/FTKPMap.h"
+#include "TrigFTKSim/FTKRegionMap.h"
+#include "TrigFTKSim/FTKSSMap.h"
+#include "TrigFTKSim/FTKConstantBank.h"
+#include "TrigFTKBankGen/FTKSectorSlice.h"
+#include "TrigFTKSim/FTKPatternWithCoverage.h"
+#include "TrigFTKSim/FTKPatternBySector.h"
+#include "CLHEP/Random/RandomEngine.h"
+#include "CLHEP/Random/RandGauss.h"
+#include "CLHEP/Random/RandFlat.h"
+
+class FTKPattGenRoot : FTKLogging {
+public:
+
+ enum SectorSelection {
+ // random sector
+ RndSector=0,
+ // check module geometry
+ // if there are exact matches, use one of them, drop others.
+ // if there are no exact matches, use one of them
+ ModuleGeometry=1,
+ // check module geometry
+ // if there are exact matches, use the one with lowest sectorID
+ // if there are no exact matches, use one of them
+ ModuleGeometrySmallestSector=2,
+ ModuleGeometryBestMatch=3
+ };
+
+ FTKPattGenRoot(int curreg, FTKSSMap* ssmap , FTKSectorSlice* slices, FTKConstantBank* constbank,int keep7of8,double tolerance7of8
+#ifdef DEBUG_BEAMSPOT
+ ,ToolHandle<Trk::IPropagator> *propagator
+#endif
+ );
+ ~FTKPattGenRoot();
+ void setBeamspot(double beamspotX,double beamspotY);
+ bool isBeamAtZero(void) const;
+ void transformToOrigin(FTKTrack &track);
+ uint64_t trackInvertion(u_int64_t ntrials, bool smear=true);
+ void SetRandomNumberGenerator(CLHEP::HepRandomEngine* RndEng ); //! Track inversion
+ void ConvertPhi(FTKTrack& track); //! Convert phi to the format used in the constants calculations
+ void GetRandomTrack(FTKTrack& track); //! Generate random track
+ FTKPattGenRoot::SectorSelection GetSectorSelection() const { return m_select;} //! Get selector algorithm
+ bool GoodTrack(const FTKTrack& track, int sector, FTKPatternWithSector* tmp_curpatt,int *missingPlanesPtr,double *distancePtr);
+ void SetModuleGeometryCheck(const std::string &fileName,
+ FTKPattGenRoot::SectorSelection select); //! set sector selection algorithm and module geometry
+ void SetRootOutput(const std::string& outfilename); //! Set filename to write patterns to root file
+ void SetOverlapRemoval(int overlap) { m_overlap = overlap;} //! Set algorithm for overlap removal: 0=disabled; 1=barrel-only, 2=everywhere
+ bool ReadSectorFile(const std::string& sectorfile); //! Read in sector file
+ void DeleteMaps(); //! Delete/destroy all the given maps/slices/etc...
+ void WriteMapsToFile(); //! Write ssmap (and hence pmap and rmap) to output root-file.
+ void SetSliceParameters(double phi_min=-999,double phi_max=999, double c_min=-999,double c_max=999,
+ double d0_min=-999,double d0_max=999, double z0_min=-999,double z0_max=999,
+ double eta_min=-999, double eta_max=999); //! Set slice parameters. If slice parametersa re not set, take them from the autotune procedure. Use +/- 999 for autotune parameters
+
+ void SetD0Exponent(double d0_alpha) { m_d0_alpha=d0_alpha; }
+protected:
+
+ // input
+ const FTKPlaneMap* pmap() const; //! pmap is an ASCII file containing the match between the ATLAS planes and the FTK planes
+ int m_curreg; //! Region
+ FTKSSMap *m_ssmap; //! Super-strip map, this object transform an hit in a SS index
+ FTKSectorSlice* m_sectorslice; //! FTKSectorSlice reads the slices file
+ FTKConstantBank* m_constbank; //! FTKConstantsBank reads the fit constants file
+ SectorSelection m_select; //! Selector algorithm
+
+ int m_overlap = 2; //! Selector for overlap removal: 0=disabled; 1=barrel-only, 2=everywhere
+
+ // internal variables
+ // // HepRandomEngine is an abstract class defining the interface for each random engine.
+ //CLHEP::HepRandomEngine *m_pEng;
+ CLHEP::RandGauss *m_RndGauss;
+ CLHEP::RandFlat *m_RndFlat;
+
+ // sectors
+ std::vector<FTKHitPattern> m_sectorbank;
+
+
+ // output
+ TDirectory *m_output;
+ FTKPatternBySectorWriter* m_patternWriter; //! output root file
+ // keep 7/8 layer patterns
+ int m_keep7of8;
+ double m_tolerance7of8;
+
+ // Slice parameters
+ double m_phi_min;
+ double m_phi_max;
+ double m_c_min;
+ double m_c_max;
+ double m_d0_min;
+ double m_d0_max;
+ double m_z0_min;
+ double m_z0_max;
+ double m_eta_min;
+ double m_eta_max;
+ double m_d0_alpha;
+ // beamspot
+ double m_beamspot[2];
+#ifdef DEBUG_BEAMSPOT
+ double m_d0BS,m_z0BS;
+#endif
+ typedef struct {
+ float rMin,rMax,zMin,zMax;
+ } RZminmax_t;
+
+ std::map<int,RZminmax_t > m_moduleBounds;
+
+private:
+ double getRandom();
+ double getRandomGaus();
+ void OverlapRemoval(std::vector<FTKPatternWithSector>& patterns);
+ void RemovePattern(std::vector<FTKPatternWithSector>& patterns, unsigned int id);
+ int OverlapSectorBarrel(int s1, int s2 );
+ int OverlapSector(int s1, int s2 );
+
+protected:
+
+private:
+#ifdef DEBUG_BEAMSPOT
+ ToolHandle<Trk::IPropagator> *m_propagator;
+#endif
+};
+
+#endif
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattGenRootAlgo.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattGenRootAlgo.h
new file mode 100644
index 00000000000..099ee86b354
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattGenRootAlgo.h
@@ -0,0 +1,91 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef FTKPattBankGenRootAlgo_h
+#define FTKPattBankGenRootAlgo_h
+
+#include "AthenaBaseComps/AthAlgorithm.h"
+#include "GaudiKernel/ServiceHandle.h"
+#include "AthenaKernel/IAtRndmGenSvc.h"
+#include "GaudiKernel/ITHistSvc.h"
+#include "TrigFTKSim/FTKLogging.h"
+#include "TrigFTKBankGen/FTKPattGenRoot.h"
+
+/////////////////////////////////////////////////////////////////////////////
+
+class FTKPattGenRootAlgo: public AthAlgorithm , public FTKLogger {
+ public:
+ FTKPattGenRootAlgo(const std::string& name, ISvcLocator* pSvcLocator);
+ virtual ~FTKPattGenRootAlgo();
+ StatusCode initialize();
+ StatusCode execute();
+ StatusCode finalize();
+
+protected:
+ virtual void PostMessage(void);
+
+ // Handle to the IAtRndmGenSvc
+ ServiceHandle<IAtRndmGenSvc> m_rndmSvc;
+
+ // // HepRandomEngine is an abstract class defining the interface for each random engine.
+ //CLHEP::HepRandomEngine* m_pEng;
+
+ std::string m_ssmap_path;
+ //std::string m_ssmaptsp_path;
+ std::string m_pmap_path;
+ std::string m_rmap_path;
+ std::string m_modulelut_path;
+ std::string m_slices_path;
+ std::string m_fitconstants_path;
+ std::string m_sectors_path;
+ // std::string m_dbghit_path;
+
+ int m_curreg = 0; //! Region of interest
+ int m_overlap = 2; //! overlap removal: 0=disabled; 1=barrel-only, 2=everywhere
+ int m_HWMODEID = 0; //! (SS)HWMODEID (0 or 2)
+ int m_IBLMode; // flag to change the IBLMode
+ bool m_fixEndcapL0;
+ bool m_ITkMode; // flag to use ITk geometry
+
+ std::string m_rndStreamName;
+
+ u_int64_t m_trials; //! Number of trials of the trackInvertion function
+
+ // sector parameters
+ double m_phi_min;
+ double m_phi_max;
+ double m_c_min;
+ double m_c_max;
+ double m_d0_min;
+ double m_d0_max;
+ double m_z0_min;
+ double m_z0_max;
+ double m_eta_min;
+ double m_eta_max;
+ double m_d0_alpha;
+
+ // beam spot
+ double m_beamspotX,m_beamspotY;
+
+ FTKSectorSlice* m_sectorslice ; //! FTKSectorSlice reads the slices file
+ std::string m_OutputFile; //! output file to store patterns in
+
+ int m_keep7of8;
+ double m_tolerance7of8;
+
+ int m_sectorSelection;
+
+#ifdef DEBUG_BEAMSPOT
+ ToolHandle<Trk::IPropagator> *m_propagator;
+#endif
+ FTKPattGenRoot *m_pattgen;
+ uint64_t m_totalPatterns;
+ uint64_t m_totalThrown;
+
+ std::string m_ModuleGeometryFile;
+
+private:
+
+};
+
+#endif // FTKPattGenRootAlgo_h
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattKDTree.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattKDTree.h
new file mode 100644
index 00000000000..1d81c820e72
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKPattKDTree.h
@@ -0,0 +1,213 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef FTKPATTKDTREE_H
+#define FTKPATTKDTREE_H
+
+#include "TrigFTKBankGen/FTKBankGenAlgo.h"
+#include <stdio.h>
+
+#include <set>
+#include <map>
+#include <list>
+#include <vector>
+#include <utility>
+
+/** this class describes a KD-Tree to simplify
+ the search for patterns */
+class FTKPattKDTree {
+private:
+ int m_dim; // dimension of the space
+ int m_depth; // depth level, 0 is the top level
+ int m_below; // This element plus the number below it
+ int m_splitplane; // coordinate compared at this level
+ std::vector<int> m_pattern; // the pattern
+ std::vector<int> m_hashID; // the pattern
+ float m_hitcount; // number of times this pattern was hit
+ double m_tmpC;//tmpc
+ double m_tmpD;//tmpD
+ double m_tmpPhi;//tmpPhi
+ double m_tmpCoto;//tmCoto
+ double m_tmpZ;//tmpZ
+ float m_tmpnhit;//tmpnhit
+ std::vector<double> m_tmphitc; // the pattern
+ std::vector<double> m_tmpxC;
+ std::vector<double> m_tmpxD;
+ std::vector<double> m_tmpxPhi;
+ std::vector<double> m_tmpxCoto;
+ std::vector<double> m_tmpxZ;
+ std::vector<double> m_tmpcovx;
+ std::vector<short> m_intc;
+ std::vector<short> m_intphi;
+ std::vector<short> m_intd0;
+ std::vector<short> m_intz0;
+ std::vector<short> m_inteta;
+
+ int m_nmissing; // Number of wildcard hits in this pattern
+ FTKPattKDTree *m_parent; // parent element
+ FTKPattKDTree *m_left; // left sub-tree
+ FTKPattKDTree *m_right; // right sub-tree
+
+
+public:
+ // FTKPattKDTree(const std::vector<int>& pattern,
+ FTKPattKDTree(const std::vector<int>& pattern,
+ const std::vector<int>& hashID,
+ const std::vector<double>& tmphitc,
+ const std::vector<double>& tmpxC,
+ const std::vector<double>& tmpxD,
+ const std::vector<double>& tmpxPhi,
+ const std::vector<double>& tmpxCoto,
+ const std::vector<double>& tmpxZ,
+ const std::vector<double>& tmpcovx,
+ const std::vector<short>& int_c,
+ const std::vector<short>& int_phi,
+ const std::vector<short>& int_d0,
+ const std::vector<short>& int_z0,
+ const std::vector<short>& int_eta,
+ const float& hitcount,
+ int depth=0, FTKPattKDTree *parent=0,
+ const double& tmpC=0,const double& tmpD=0,const double& tmpPhi=0,
+ const double& tmpCoto=0,const double& tmpZ=0,const float& tmpnhit=0
+ );
+
+ ~FTKPattKDTree();
+
+ int addNode(const std::vector<int>& pattern,
+ const std::vector<int>& hashID,
+ const std::vector<double>& tmphic,
+ const std::vector<double>& tmpxC,
+ const std::vector<double>& tmpxD,
+ const std::vector<double>& tmpxPhi,
+ const std::vector<double>& tmpxCoto,
+ const std::vector<double>& tmpxZ,
+ const std::vector<double>& tmpcovx,
+ const std::vector<short>& int_c,
+ const std::vector<short>& int_phi,
+ const std::vector<short>& int_d0,
+ const std::vector<short>& int_z0,
+ const std::vector<short>& int_eta,
+ const float& hitcount,const double& tmpC,
+ const double& tmpD,const double& tmpPhi,const double& tmpCoto,const double& tmpZ,
+ const float& tmpnhit);
+
+ int getCount() const { return m_below; }
+ float getHitCount() const { return m_hitcount; }
+ void incHitCount( float v=1 ) { m_hitcount += v; }
+
+ void settmpC(double v){m_tmpC=v;};
+ void settmpD(double v){m_tmpD=v;};
+ void settmpPhi(double v){m_tmpPhi=v;};
+ void settmpCoto(double v){m_tmpCoto=v;};
+ void settmpZ(double v){m_tmpZ=v;};
+ void settmphitc(const std::vector<double>& v){m_tmphitc=v;};
+ void settmpxC(const std::vector<double>& v){m_tmpxC=v;};
+ void settmpxD(const std::vector<double>& v){m_tmpxD=v;};
+ void settmpxPhi(const std::vector<double>& v){m_tmpxPhi=v;};
+ void settmpxCoto(const std::vector<double>& v){m_tmpxCoto=v;};
+ void settmpxZ(const std::vector<double>& v){m_tmpxZ=v;};
+ void settmpcovx(const std::vector<double>& v){m_tmpcovx=v;};
+
+ void setintc(const std::vector<short>& v){m_intc=v;};
+ void setintphi(const std::vector<short>& v){m_intphi=v;};
+ void setintd0(const std::vector<short>& v){m_intd0=v;};
+ void setintz0 (const std::vector<short>& v){m_intz0=v;};
+ void setinteta (const std::vector<short>& v){m_inteta=v;};
+
+ void settmpnhit(float v){m_tmpnhit=v;};
+
+ double gettmpC() const { return m_tmpC;}
+ double gettmpD() const { return m_tmpD;}
+ double gettmpPhi() const { return m_tmpPhi;}
+ double gettmpCoto() const { return m_tmpCoto;}
+ double gettmpZ() const { return m_tmpZ;}
+ double gettmpnhit() const{ return m_tmpnhit;}
+
+ const std::vector<double>& gettmphitc() const { return m_tmphitc;}
+ const std::vector<double>& gettmpxC() const { return m_tmpxC;}
+ const std::vector<double>& gettmpxD() const { return m_tmpxD;}
+ const std::vector<double>& gettmpxPhi() const { return m_tmpxPhi;}
+ const std::vector<double>& gettmpxCoto() const { return m_tmpxCoto;}
+ const std::vector<double>& gettmpxZ() const { return m_tmpxZ;}
+ const std::vector<double>& gettmpcovx() const { return m_tmpcovx;}
+
+ const std::vector<short>& getintc() const { return m_intc;}
+ const std::vector<short>& getintphi() const { return m_intphi;}
+ const std::vector<short>& getintd0() const { return m_intd0;}
+ const std::vector<short>& getintz0() const { return m_intz0;}
+ const std::vector<short>& getinteta() const { return m_inteta;}
+
+ int getNMissing() const { return m_nmissing; }
+ void getEndangered(std::set<std::pair<std::vector<int>, float> > &, bool);
+ void getAllBelow(std::vector< FTKPattKDTree* >& );
+ int recursiveRemove();
+ void markForRemoval();
+ void cleanup();
+ const std::vector<int>& getPattern() const { return m_pattern; }
+ const std::vector<int>& gethashID() const { return m_hashID; }
+ bool markedForRemoval() const { return (m_hitcount < 0); }
+ const int &getDepth() const { return m_depth; }
+ int getSplitPlane() const { return m_splitplane; }
+ void findSimilar(bool const_test,
+ const std::vector<int>&,
+ const std::vector<double>&,
+ const std::vector<double>&,
+ const std::vector<double>&,
+ const std::vector<double>&,
+ const std::vector<double>&,
+ const std::vector<double>&,
+ const std::vector<double>&,
+ const std::vector<short>&,
+ const std::vector<short>&,
+ const std::vector<short>&,
+ const std::vector<short>&,
+ const std::vector<short>&,
+ std::set<FTKPattKDTree*> &,
+ bool exactmatch = false,const double& C=0,
+ const double& tmpD=0,const double& tmpPhi=0,const double& tmpCoto=0,const double& tmpZ=0,
+ const float& tmpnhit=0);
+};
+
+// Interface functions go here
+void initPattTree(int nbanks, int nplanes,int ndims);
+void finishPattTree();
+int addKDPattern(int bank, bool const_test_mode, int* pattern, int *hashID, int mult,matrix Mtmp,double* hitc,
+ double* xC,double* xD,double* xPhi,double* xCoto,double* xZ,double* covx,
+ vector<short> int_c,vector<short> int_phi,vector<short> int_d0,
+ vector<short> int_z0,vector<short> int_eta);
+
+int loadPatterns(int bank, FILE *infile, int npatterns);
+int isTherePatt(int bank, int* pattern);
+int sortPatterns(int bank);
+int sortMPatterns(int bank);
+int getNPatterns( int bank);
+int getPatternSS(int bank, int pattid, int plane);
+int getPatthashID(int bank, int pattid, int plane);
+int getPattNHits(int bank, int pattid);
+double getPattC(int bank, int pattid);
+double getPattD(int bank, int pattid);
+double getPattPhi(int bank, int pattid);
+double getPattCoto(int bank, int pattid);
+double getPattZ(int bank, int pattid);
+double getPatthitc(int bank, int pattid,int dim);
+float getPattnhit(int bank, int pattid);
+
+double getPattxC(int bank, int pattid,int dim);
+double getPattxD(int bank, int pattid,int dim);
+double getPattxPhi(int bank, int pattid,int dim);
+double getPattxCoto(int bank, int pattid,int dim);
+double getPattxZ(int bank, int pattid,int dim);
+double getPattcovx(int bank, int pattid,int dim);
+
+short getPattintc(int bank, int pattid,int nhit);
+short getPattintphi(int bank, int pattid,int nhit);
+short getPattintd0(int bank, int pattid,int nhit);
+short getPattintz0(int bank, int pattid,int nhit);
+short getPattinteta(int bank, int pattid,int nhit);
+
+//void print(); // used for debugging
+
+bool compare_patt(const FTKPattKDTree* a, const FTKPattKDTree* b);
+bool compare_Mpatt(const FTKPattKDTree* a, const FTKPattKDTree* b);
+
+#endif // FTKPATTKDTREE_H
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKSectorSlice.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKSectorSlice.h
new file mode 100644
index 00000000000..da1526e2c23
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/FTKSectorSlice.h
@@ -0,0 +1,115 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef FTKSectorSlice_h
+#define FTKSectorSlice_h
+
+#include <TROOT.h>
+#include <TrigFTKSim/FTKTrack.h>
+
+class FTKSectorSlice {
+
+ public:
+ FTKSectorSlice();
+ ~FTKSectorSlice(){};
+
+ void loadSlices(std::string slice_file_path);
+ double getAutotunePhiMin();
+ double getAutotuneCMin();
+ double getAutotuneDMin();
+ double getAutotuneZ0Min();
+ double getAutotuneCthetaMin();
+ double getAutotuneEtaMin();
+ double getAutotunePhiMax();
+ double getAutotuneCMax();
+ double getAutotuneDMax();
+ double getAutotuneZ0Max();
+ double getAutotuneCthetaMax();
+ double getAutotuneEtaMax();
+
+ // In case user wants to set ranges manually
+ void setPhiMin(const double &v) { m_phi_min = v; }
+ void setPhiMax(const double &v) { m_phi_max = v; }
+ void setCMin(const double &v) { m_c_min = v; }
+ void setCMax(const double &v) { m_c_max = v; }
+ void setD0Min(const double &v) { m_d0_min = v; }
+ void setD0Max(const double &v) { m_d0_max = v; }
+ void setZ0Min(const double &v) { m_z0_min = v; }
+ void setZ0Max(const double &v) { m_z0_max = v; }
+ void setEtaMin(const double &v) { m_eta_min = v; m_ctheta_min = TMath::SinH(v); }
+ void setEtaMax(const double &v) { m_eta_max = v; m_ctheta_max = TMath::SinH(v); }
+
+ // JW - to be used if the user inputs parameter ranges by hand after loading the slices
+ void resetStepSizes() {
+ m_step_phi = (m_phi_max - m_phi_min)/m_phi_nbins;
+ autotune(bits_phi,m_phi_min,m_phi_max,m_autotune_phi_min,m_autotune_phi_max,true,"phi");
+ m_step_c = (m_c_max - m_c_min)/m_c_nbins;
+ autotune(bits_c,m_c_min,m_c_max,m_autotune_c_min,m_autotune_c_max,false,"c");
+ m_step_d0 = (m_d0_max - m_d0_min)/m_d0_nbins;
+ autotune(bits_d,m_d0_min,m_d0_max,m_autotune_d0_min,m_autotune_d0_max,false,"d0");
+ m_step_z0 = (m_z0_max - m_z0_min)/m_z0_nbins;
+ autotune(bits_z0,m_z0_min,m_z0_max,m_autotune_z0_min,m_autotune_z0_max,false,"z0");
+ m_step_ctheta = (m_ctheta_max - m_ctheta_min)/m_ctheta_nbins;
+ autotune(bits_ctheta,m_ctheta_min,m_ctheta_max,m_autotune_ctheta_min,m_autotune_ctheta_max,false,"cos(theta)");
+ m_autotune_eta_min=TMath::ASinH(m_autotune_ctheta_min);
+ m_autotune_eta_max=TMath::ASinH(m_autotune_ctheta_max);
+ }
+
+ std::vector<int> *searchSectors(FTKTrack& track);
+
+ private:
+ TClonesArray *bits_phi;
+ TClonesArray *bits_c;
+ TClonesArray *bits_d;
+ TClonesArray *bits_z0;
+ TClonesArray *bits_ctheta;
+
+ void autotune(const TClonesArray *array,double_t x0,double_t x1,
+ double &autoMin,double &autoMax,
+ bool isAzimuth,const char *debug);
+
+ // Min and max parameters found out in the slice file
+ Double_t m_phi_min;
+ Double_t m_phi_max;
+ Double_t m_c_min;
+ Double_t m_c_max;
+ Double_t m_d0_min;
+ Double_t m_d0_max;
+ Double_t m_z0_min;
+ Double_t m_z0_max;
+ Double_t m_ctheta_min;
+ Double_t m_ctheta_max;
+ Double_t m_eta_min;
+ Double_t m_eta_max;
+
+ double m_autotune_phi_min;
+ double m_autotune_c_min;
+ double m_autotune_d0_min;
+ double m_autotune_z0_min;
+ double m_autotune_ctheta_min;
+ double m_autotune_eta_min;
+ double m_autotune_phi_max;
+ double m_autotune_c_max;
+ double m_autotune_d0_max;
+ double m_autotune_z0_max;
+ double m_autotune_ctheta_max;
+ double m_autotune_eta_max;
+
+ Int_t m_phi_nbins;
+ Int_t m_c_nbins;
+ Int_t m_d0_nbins;
+ Int_t m_z0_nbins;
+ Int_t m_ctheta_nbins;
+
+ Double_t m_step_phi;
+ Double_t m_step_c;
+ Double_t m_step_d0;
+ Double_t m_step_z0;
+ Double_t m_step_ctheta;
+
+ // Flag to use ITk geometry
+ bool m_ITkMode;
+
+ };
+
+#endif // FTKSectorSlice_h
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/PattMergeRootAlgo.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/PattMergeRootAlgo.h
new file mode 100644
index 00000000000..ce65c24d990
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/PattMergeRootAlgo.h
@@ -0,0 +1,44 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef PattMergeRootAlgo_h
+#define PattMergeRootAlgo_h
+
+#include "AthenaBaseComps/AthAlgorithm.h"
+#include "GaudiKernel/ServiceHandle.h"
+#include "AthenaKernel/IAtRndmGenSvc.h"
+#include "GaudiKernel/ITHistSvc.h"
+
+#include "TrigFTKSim/FTKLogging.h"
+#include <vector>
+#include <string>
+/////////////////////////////////////////////////////////////////////////////
+
+
+class PattMergeRootAlgo: public AthAlgorithm , public FTKLogger {
+ public:
+ PattMergeRootAlgo(const std::string& name, ISvcLocator* pSvcLocator);
+ virtual ~PattMergeRootAlgo();
+ StatusCode initialize();
+ StatusCode execute();
+ StatusCode finalize();
+ StatusCode RunMerging();
+
+protected:
+ virtual void PostMessage(void); // FTKLogger write out to Athena
+
+
+protected:
+ std::string m_TextImportRootFile;
+ std::string m_RootOutFile;
+ std::string m_TextOutFile;
+ bool m_DeleteAfterMerging;
+ int m_NSub;
+ int m_MinCov;
+ int m_Compression;
+ std::string m_WhereToRunMerging;
+ std::vector< std::string > m_InputFiles;
+
+};
+
+#endif // PattMergeRootAlgo_h
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/atlparslice_root.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/atlparslice_root.h
new file mode 100644
index 00000000000..67f9cf3aa8d
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/atlparslice_root.h
@@ -0,0 +1,65 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef ATLPARSLICE_ROOT_H
+#define ATLPARSLICE_ROOT_H
+
+#include <TMath.h>
+#include <TFile.h>
+#include <TNtuple.h>
+#include <TClonesArray.h>
+#include <TBits.h>
+#include <vector>
+#include <iostream>
+class TSlices {
+ public:
+ TFile *ofile; // output file
+ TNtuple *n_slicedef; // ntuple with all the slice definitions
+ TClonesArray *c_bits_c; // c slices
+ TClonesArray *c_bits_d; // d slices
+ TClonesArray *c_bits_phi; // phi slices
+ TClonesArray *c_bits_z0; // z0 slices
+ TClonesArray *c_bits_ctheta; // ctheta slices
+ TBits *result_bits;
+ // std::vector<int> finalSectors;
+ unsigned int curPos; // popSector current position pointer
+
+ public:
+ // slice parameters
+ Int_t par_c_slices;
+ Double_t par_c_max;
+ Double_t par_c_min;
+
+ Int_t par_d_slices;
+ Double_t par_d_max;
+ Double_t par_d_min;
+
+ Int_t par_phi_slices;
+ Double_t par_phi_max;
+ Double_t par_phi_min;
+
+ Int_t par_z0_slices;
+ Double_t par_z0_max;
+ Double_t par_z0_min;
+
+ Int_t par_ctheta_slices;
+ Double_t par_ctheta_max;
+ Double_t par_ctheta_min;
+ public:
+ TSlices(int *nslices, double *min_vals, double *max_vals);
+ ~TSlices();
+};
+
+
+// FlagAK: allow to work with multiple slices simultaneously, indexed by the index variable
+void initNSlices(int N, int *nslices, double *min_vals, double *max_vals);
+void initSlices(int index, int nsectors);
+void addSectorToSlice(int index, int sector, int c, int d, int phi, int z0, int ctheta);
+void saveSlices(int index, char *slice_file);
+//int popSector(int index);
+//void printSectors(int index);
+void searchSectors(int index, double c, double d, double phi, double z0, double ctheta);
+int checkSector(int index, int sector,double c, double d, double phi, double z0, double ctheta);
+void loadSlices(int index, char *slice_file);
+
+#endif // ATLPARSLICE_ROOT_H
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/decodeEtacode.h b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/decodeEtacode.h
new file mode 100644
index 00000000000..f3d99816ddf
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/TrigFTKBankGen/decodeEtacode.h
@@ -0,0 +1,17 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#ifndef __H_DECODEETACODE__
+#define __H_DECODEETACODE__
+
+// decode "etacode", see TrigFTKSim/FTKHit.h
+
+#define SECTION_INT(a) (a%1000 < 20 ? 0 : (a%10))
+#define ETA_CODE_INT(a) (a%1000)
+#define PHI_MOD_INT(a) (a/1000)
+#define ETA_MOD_INT(a) (a%1000 < 20 ? a%1000 : (a%1000)/20-1)
+#define ASIDE_INT(a) (a%1000 < 20 ? 0 : ((ETA_CODE_INT(a))/10)%2 == 0) //POSEC
+#define CSIDE_INT(a) (a%1000 < 20 ? 0 : ((ETA_CODE_INT(a))/10)%2) //NEGEC
+
+
+#endif
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKConstantGen_tf.py b/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKConstantGen_tf.py
new file mode 100755
index 00000000000..b5223f11b6c
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKConstantGen_tf.py
@@ -0,0 +1,70 @@
+#!/usr/bin/env python
+
+## FTK Simulation Transform
+# @version $Id: FTKConstantGen_tf.py 718878 2016-01-20 17:27:51Z jwebster $
+import argparse
+import sys
+import time
+import traceback
+
+import logging
+
+# Setup core logging here
+from PyJobTransforms.trfLogger import msg
+msg.info('logging set in %s' % sys.argv[0])
+
+from PyJobTransforms.trfExitCodes import trfExit
+from PyJobTransforms.transform import transform
+from PyJobTransforms.trfExe import athenaExecutor
+from PyJobTransforms.trfDecorators import stdTrfExceptionHandler, sigUsrStackTrace
+
+import PyJobTransforms.trfExceptions as trfExceptions
+import PyJobTransforms.trfArgClasses as trfArgClasses
+
+@stdTrfExceptionHandler
+@sigUsrStackTrace
+def main():
+
+ msg.info('This is %s' % sys.argv[0])
+
+ trf = getTransform()
+ trf.parseCmdLineArgs(sys.argv[1:])
+ trf.execute()
+ trf.generateReport()
+
+ msg.info("%s stopped at %s, trf exit code %d" % (sys.argv[0], time.asctime(), trf.exitCode))
+ sys.exit(trf.exitCode)
+
+
+## Get the base transform with all arguments added
+def getTransform():
+ trf = transform(executor = athenaExecutor(name = 'FTKConstantGen',
+ skeletonFile = 'TrigFTKBankGen/skeleton.FTKConstantGen.py'))
+ addFTKPattGenArgs(trf.parser)
+ return trf
+
+
+def addFTKPattGenArgs(parser):
+ # Add a specific FTK argument group
+ parser.defineArgGroup('FTKConstantGen', 'Fast tracker simulation options')
+
+ parser.add_argument('--NBanks', type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Number of pattern banks', group='FTKConstantGen')
+
+ parser.add_argument('--bankregion', type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Bank region number', group='FTKConstantGen')
+
+ # parser.add_argument('--allregions', type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ # help='Merge all regions', group='FTKConstantGen')
+
+ parser.add_argument('--genconst', type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ help='Generate the sectors and constants', group='FTKConstantGen')
+
+ parser.add_argument('--inputFTKMatrixFile', type=trfArgClasses.argFactory(trfArgClasses.argNTUPFile,runarg=True),
+ help="input matrix file", group="FTKConstantGen" )
+
+ parser.add_argument('--ITkMode', type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ help='Use ITk geometry', group='FTKConstantGen')
+
+if __name__ == '__main__':
+ main()
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKMatrixMerge_tf.py b/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKMatrixMerge_tf.py
new file mode 100755
index 00000000000..a72626e97a8
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKMatrixMerge_tf.py
@@ -0,0 +1,83 @@
+#!/usr/bin/env python
+
+## FTK Simulation Transform
+# @version $Id: FTKMatrixMerge_tf.py 574395 2013-12-07 10:13:16Z gvolpi $
+import argparse
+import sys
+import time
+import traceback
+
+import logging
+
+# Setup core logging here
+from PyJobTransforms.trfLogger import msg
+msg.info('logging set in %s' % sys.argv[0])
+
+from PyJobTransforms.trfExitCodes import trfExit
+from PyJobTransforms.transform import transform
+from PyJobTransforms.trfExe import athenaExecutor
+from PyJobTransforms.trfDecorators import stdTrfExceptionHandler, sigUsrStackTrace
+
+import PyJobTransforms.trfExceptions as trfExceptions
+import PyJobTransforms.trfArgClasses as trfArgClasses
+
+@stdTrfExceptionHandler
+@sigUsrStackTrace
+def main():
+
+ msg.info('This is %s' % sys.argv[0])
+
+ trf = getTransform()
+ trf.parseCmdLineArgs(sys.argv[1:])
+ trf.execute()
+ trf.generateReport()
+
+ msg.info("%s stopped at %s, trf exit code %d" % (sys.argv[0], time.asctime(), trf.exitCode))
+ sys.exit(trf.exitCode)
+
+
+## Get the base transform with all arguments added
+def getTransform():
+ trf = transform(executor = athenaExecutor(name = 'FTKMatrixMerge',
+ skeletonFile = 'TrigFTKBankGen/skeleton.FTKMatrixMerge.py'))
+ addFTKPattGenArgs(trf.parser)
+ return trf
+
+
+def addFTKPattGenArgs(parser):
+ # Add a specific FTK argument group
+ parser.defineArgGroup('FTKMatrixMerge', 'Fast tracker simulation options')
+
+ parser.add_argument('--NBanks', type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Number of pattern banks', group='FTKMatrixMerge')
+
+ parser.add_argument('--bankregion', type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Bank region number', group='FTKMatrixMerge')
+
+ parser.add_argument('--allregions', type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ help='Merge all regions', group='FTKMatrixMerge')
+
+ parser.add_argument('--genconst', type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ help='Generate the sectors and constants', group='FTKMatrixMerge')
+
+ parser.add_argument('--inputFTKMatrixFile',
+ type=trfArgClasses.argFactory(trfArgClasses.argNTUPFile, runarg=True, io='input'),
+
+ help='List of matrix files',group='FTKMatrixMerge',nargs='+')
+
+ parser.add_argument('--FTKMatrixFileRegEx', group="FTKMatrixMerge",
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help="Regular expression to select the input files from the working dir")
+
+ parser.add_argument('--MaxInputFiles', group="FTKMatrixMerge",
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help="Max number of input files to include, only interpretted when used in combination with FTKMatrixFileRegEx")
+
+ parser.add_argument('--outputMergedFTKMatrixFile', type=trfArgClasses.argFactory(trfArgClasses.argNTUPFile,runarg=True),
+ help="Output file", group="FTKMatrixMerge" )
+
+ parser.add_argument('--ITkMode', type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ help='Use ITk geometry', group='FTKMatrixMerge')
+
+if __name__ == '__main__':
+ main()
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKMatrixReduction_tf.py b/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKMatrixReduction_tf.py
new file mode 100755
index 00000000000..890f94a06e8
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKMatrixReduction_tf.py
@@ -0,0 +1,73 @@
+#!/usr/bin/env python
+
+## FTK Simulation Transform
+# @version $Id: FTKMatrixReduction_tf.py 686533 2015-07-30 15:33:01Z tomoya $
+import argparse
+import sys
+import time
+import traceback
+
+import logging
+
+# Setup core logging here
+from PyJobTransforms.trfLogger import msg
+msg.info('logging set in %s' % sys.argv[0])
+
+from PyJobTransforms.trfExitCodes import trfExit
+from PyJobTransforms.transform import transform
+from PyJobTransforms.trfExe import athenaExecutor
+from PyJobTransforms.trfDecorators import stdTrfExceptionHandler, sigUsrStackTrace
+
+import PyJobTransforms.trfExceptions as trfExceptions
+import PyJobTransforms.trfArgClasses as trfArgClasses
+
+@stdTrfExceptionHandler
+@sigUsrStackTrace
+def main():
+
+ msg.info('This is %s' % sys.argv[0])
+
+ trf = getTransform()
+ trf.parseCmdLineArgs(sys.argv[1:])
+ trf.execute()
+ trf.generateReport()
+
+ msg.info("%s stopped at %s, trf exit code %d" % (sys.argv[0], time.asctime(), trf.exitCode))
+ sys.exit(trf.exitCode)
+
+
+## Get the base transform with all arguments added
+def getTransform():
+ trf = transform(executor = athenaExecutor(name = 'FTKMatrixReduction',
+ skeletonFile = 'TrigFTKBankGen/skeleton.FTKMatrixReduction.py'))
+ addFTKPattGenArgs(trf.parser)
+ return trf
+
+
+def addFTKPattGenArgs(parser):
+ # Add a specific FTK argument group
+ parser.defineArgGroup('FTKMatrixReduction', 'Fast tracker simulation options')
+
+ parser.add_argument('--NBanks', type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Number of pattern banks', group='FTKMatrixReduction')
+
+ parser.add_argument('--bankregion', type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Bank region number', group='FTKMatrixReduction')
+
+ parser.add_argument('--allregions', type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ help='Merge all regions', group='FTKMatrixReduction')
+
+ parser.add_argument('--eightLayer', type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ help='Reduce 12L matrix to 8L matrix', group='FTKMatrixReduction')
+
+ parser.add_argument('--pmap_12L', type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='12L pmap file', group='FTKMatrixReduction')
+
+ parser.add_argument('--pmap_8L', type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='8L pmap file', group='FTKMatrixReduction')
+
+ parser.add_argument('--inputFTKMatrixFile', type=trfArgClasses.argFactory(trfArgClasses.argNTUPFile,runarg=True),
+ help="input matrix file", group="FTKMatrixReduction" )
+
+if __name__ == '__main__':
+ main()
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKPattGenRoot_tf.py b/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKPattGenRoot_tf.py
new file mode 100755
index 00000000000..0654f8bd7e8
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/scripts/FTKPattGenRoot_tf.py
@@ -0,0 +1,247 @@
+#!/usr/bin/env python
+
+## FTK Simulation Transform
+
+import argparse
+import sys
+import time
+import traceback
+import logging
+
+# Setup core logging here
+from PyJobTransforms.trfLogger import msg
+msg.info('logging set in %s' % sys.argv[0])
+
+from PyJobTransforms.trfExitCodes import trfExit
+from PyJobTransforms.transform import transform
+from PyJobTransforms.trfExe import athenaExecutor
+from PyJobTransforms.trfArgs import addAthenaArguments
+from PyJobTransforms.trfDecorators import stdTrfExceptionHandler, sigUsrStackTrace
+
+import PyJobTransforms.trfExceptions as trfExceptions
+import PyJobTransforms.trfArgClasses as trfArgClasses
+
+@stdTrfExceptionHandler
+@sigUsrStackTrace
+
+# ___________________________________________________________________________ #
+def main():
+
+ msg.info('This is %s' % sys.argv[0])
+
+ trf = getTransform()
+ trf.parseCmdLineArgs(sys.argv[1:])
+ trf.execute()
+ trf.generateReport()
+
+ msg.info("%s stopped at %s, trf exit code %d" % (sys.argv[0], time.asctime(), trf.exitCode))
+ sys.exit(trf.exitCode)
+
+
+
+# ___________________________________________________________________________ #
+def getTransform():
+# Get the base transform with all arguments added
+ trf = transform(executor = athenaExecutor(name = 'FTKPattGenRoot',
+ skeletonFile = 'TrigFTKBankGen/skeleton.FTKPattBankGenRoot.py'))
+ addAthenaArguments(trf.parser)
+ addFTKPattGenArgs(trf.parser)
+ return trf
+
+
+
+# ___________________________________________________________________________ #
+def addFTKPattGenArgs(parser):
+ # Add a specific FTK argument group
+ parser.defineArgGroup('FTKPattGenRoot', 'Options for FTKPattGenRootAlgo for pattern generation')
+
+ # --- 'number of calls of trackInvertion '
+ parser.add_argument('--maxEvents',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Number of events to be processed',
+ group='FTKPattGenRoot')
+
+ # --- output file (optional)
+ parser.add_argument('--OutputFile',
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='Name of the output file',
+ group='FTKPattGenRoot')
+
+ # --- path's to maps
+ parser.add_argument('--pmap_path',
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='Location of pmap file',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--rmap_path',
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='Location of rmap file',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--ssmap_path',
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='Location of ssmap file',
+ group='FTKPattGenRoot')
+
+ # --- path's to constants
+ parser.add_argument('--slices',
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='Slices file',
+ group='FTKPattGenRoot')
+ parser.add_argument('--fitconsts',
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='Fit-constants path file',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--sectors',
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='sectors path file',
+ group='FTKPattGenRoot')
+
+ # --- patt-gen options
+ parser.add_argument('--curreg',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Current region',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--seed',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='primary seed of the random generator',
+ group='FTKPattGenRoot')
+ parser.add_argument('--seed2',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='secondary seed of the random generator',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--hwmodeid',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Set format of the SS-ID.',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--ModuleLUTPath',
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='look-up table for HWMODEID=2',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--IBLMode',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Set IBL Mode. Options are 0, 1 or 2.',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--FixEndcapL0',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Endcap layer fix, 0 or 1.',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--ITkMode',
+ type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ help='Run assuming ITk geometry',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--pconst_overlap',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Overlap removal: 0=disabled; 1=barrel-only, 2=everywhere',
+ group='FTKPattGenRoot')
+
+# parser.add_argument('--smear',
+# type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+# help='Boolean flag to set the smearing',
+# group='FTKPattGenRoot')
+
+ parser.add_argument('--trials',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='Number of trials of the trackInvertion function',
+ group='FTKPattGenRoot')
+
+ # --- further options
+ parser.add_argument('--phi_min',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter phi min',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--phi_max',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter phi max',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--c_min',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter c min',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--c_max',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter c max',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--d0_min',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter d0 min',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--d0_max',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter d0 max',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--z0_min',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter z0 min',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--z0_max',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter z0 max',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--eta_min',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter eta min',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--eta_max',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='Slice parameter eta max',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--d0_alpha',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='exponent for d0 distribution',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--keep7of8',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='bit-mask of allowed missing planes for 7/8',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--tolerance7of8',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='tolerance for 7/8 option',
+ group='FTKPattGenRoot')
+ parser.add_argument('--beamspotX',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='beamspot (X)',
+ group='FTKPattGenRoot')
+ parser.add_argument('--beamspotY',
+ type=trfArgClasses.argFactory(trfArgClasses.argFloat, runarg=True),
+ help='beamspot (Y)',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--ModuleGeometryFile',
+ type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+ help='module positions for improving the slices',
+ group='FTKPattGenRoot')
+
+ parser.add_argument('--sectorSelection',
+ type=trfArgClasses.argFactory(trfArgClasses.argInt, runarg=True),
+ help='sector selection algorithm (0:loose .. 3:tight)',
+ group='FTKPattGenRoot')
+
+# parser.add_argument('--pattgenalgo',
+# type=trfArgClasses.argFactory(trfArgClasses.argString, runarg=True),
+# help='Algorithm type: 1=random sector selection; 2=weighted random sector selection; 3=all patterns of all sectors; 4=random pattern selection; 5=weighted random pattern selection',
+# group='FTKPattGenRoot')
+
+
+if __name__ == '__main__':
+ main()
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/FTKBankGen_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/FTKBankGen_joboptions.py
new file mode 100644
index 00000000000..3158cab53be
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/FTKBankGen_joboptions.py
@@ -0,0 +1,323 @@
+#-----------------------------------------------------------------------------
+# Athena imports
+#-----------------------------------------------------------------------------
+from AthenaCommon.Constants import *
+from AthenaCommon.AppMgr import theApp
+from AthenaCommon.AppMgr import ServiceMgr
+import AthenaPoolCnvSvc.ReadAthenaPool
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+OutputLevel = INFO
+doJiveXML = False
+doVP1 = False
+doWriteESD = False
+doWriteAOD = False
+doReadBS = False
+doAuditors = True
+
+import os
+doEdmMonitor = False
+doNameAuditor = False
+
+#-----------------------------------------------------------------------------
+# Set output level threshold (2=DEBUG, 3=INFO, 4=WARNING, 5=ERROR, 6=FATAL )
+ServiceMgr.MessageSvc.OutputLevel = WARNING
+import AthenaServices
+AthenaServices.AthenaServicesConf.AthenaEventLoopMgr.OutputLevel = WARNING
+
+
+#-----------------------------------------------------------------------------
+# Input Datasets
+#-----------------------------------------------------------------------------
+
+ServiceMgr.EventSelector.InputCollections = ['rdo.pool.root']
+
+event=10000
+theApp.EvtMax = event # -1 means all events
+
+from InDetBeamSpotService.InDetBeamSpotServiceConf import BeamCondSvc
+ServiceMgr+=BeamCondSvc(useDB=False,
+ posX=0.00,
+ posY=0.00,
+ posZ=0.00,
+ sigmaX=0.000001,
+ sigmaY=0.000001,
+ sigmaZ=0.01,
+ tiltX=0.0,
+ tiltY=0.0
+# width average from run 161242 - 162347
+# sigmaX=0.0378,
+# sigmaY=0.0373,
+# sigmaZ=66.644,
+# tiltX=0.0,
+# tiltY=0.0
+# for run #152166, except for angle info !!! wrong run number !!!
+# pqosX=-0.353,
+# pqosY=0.667,
+# pqosZ=3.05,
+# sigmaX=0.0444,
+# sigmaY=0.0757,
+# sigmaZ=25.6,
+# tiltX=0.0,
+# tiltY=-0.0
+# for run #167776, except for angle info
+# posX=0.0776,
+# posY=1.13,
+# posZ=12.,
+# sigmaX=0.0395,
+# sigmaY=0.0394,
+# sigmaZ=0.000025,
+# tiltX=0.0,
+# tiltY=0.0
+ )
+#
+
+# Reconstruction setup
+
+# DetDescrVersion = "ATLAS-GEO-16-00-00"
+# ConditionsTag = "OFLCOND-DR-BS7T-A100-04"
+#DetDescrVersion = "ATLAS-GEO-18-01-03"
+#ConditionsTag = "OFLCOND-SDR-BS14T-IBL-11"
+DetDescrVersion = "ATLAS-IBL-03-00-00"
+ConditionsTag = "OFLCOND-MC12-IBL-20-30-25"
+
+
+#ConditionsTag = "OFLCOND-SDR-BS14T-IBL-03"
+
+from AthenaCommon.GlobalFlags import globalflags
+globalflags.DetGeo = 'atlas'
+globalflags.DataSource = 'geant4'
+globalflags.InputFormat = 'pool'
+globalflags.DetDescrVersion = DetDescrVersion
+globalflags.ConditionsTag = ConditionsTag
+globalflags.print_JobProperties()
+from AthenaCommon.BeamFlags import jobproperties
+jobproperties.Beam.numberOfCollisions = 0.0
+from CaloRec.CaloCellFlags import jobproperties
+jobproperties.CaloCellFlags.doLArCellEmMisCalib=False;
+
+if len(globalflags.ConditionsTag())!=0:
+ print 'DEBUG -- If statement entered (code=01234567)'
+ from IOVDbSvc.CondDB import conddb
+ conddb.setGlobalTag(globalflags.ConditionsTag())
+
+from RecExConfig.RecFlags import rec
+
+rec.doCalo=False
+rec.doInDet=True
+rec.doMuon=False
+rec.doJetMissingETTag=False
+rec.doEgamma=False
+rec.doMuonCombined=False
+rec.doTau=False
+rec.doTrigger=False
+
+rec.Commissioning.set_Value_and_Lock(True)
+
+from AthenaCommon.DetFlags import DetFlags
+# --- switch on InnerDetector, turn off TRT
+DetFlags.ID_setOn()
+#DetFlags.makeRIO.pixel_setOff()
+#DetFlags.makeRIO.SCT_setOff()
+DetFlags.makeRIO.TRT_setOff()
+
+# --- and switch off all the rest
+DetFlags.Calo_setOff()
+DetFlags.Muon_setOff()
+# ---- switch parts of ID off/on as follows (always use both lines)
+#DetFlags.pixel_setOff()
+#DetFlags.detdescr.pixel_setOn()
+#DetFlags.SCT_setOff()
+#DetFlags.detdescr.SCT_setOn()
+DetFlags.TRT_setOff()
+DetFlags.detdescr.TRT_setOn()
+# --- printout
+DetFlags.Print()
+
+#--------------------------------------------------------------
+# Load InDet configuration
+#--------------------------------------------------------------
+
+# --- setup InDetJobProperties
+from InDetRecExample.InDetJobProperties import InDetFlags
+InDetFlags.doTruth = True
+
+InDetFlags.doBackTracking.set_Value_and_Lock(True)
+InDetFlags.doTRTStandalone.set_Value_and_Lock(True)
+InDetFlags.doPixelClusterSplitting.set_Value_and_Lock(False)
+InDetFlags.writeRDOs.set_Value_and_Lock(True)
+from TriggerJobOpts.TriggerFlags import TriggerFlags
+TriggerFlags.doLVL2.set_Value_and_Lock(True)
+TriggerFlags.doEF.set_Value_and_Lock(True)
+
+# --- uncomment to change the default of one of the following options:
+#InDetFlags.doNewTracking = False
+#InDetFlags.doLowPt = True
+#InDetFlags.doBeamGas = True
+#InDetFlags.doBeamHalo = True
+#InDetFlags.doxKalman = False
+#InDetFlags.doiPatRec = False
+#InDetFlags.doBackTracking = False
+#InDetFlags.doTRTStandalone = False
+#InDetFlags.doSingleSpBackTracking = True
+
+# --- Turn off track slimming
+#InDetFlags.doSlimming = False
+
+# --- possibility to run tracking on subdetectors separately (and independent from each other)
+InDetFlags.doTrackSegmentsPixel = True
+InDetFlags.doTrackSegmentsSCT = True
+InDetFlags.doTrackSegmentsTRT = True
+
+# --- possibility to change the trackfitter
+#InDetFlags.trackFitterType = 'KalmanFitter'
+
+# --- activate monitorings
+InDetFlags.doMonitoringGlobal = False
+InDetFlags.doMonitoringPixel = False
+InDetFlags.doMonitoringSCT = False
+InDetFlags.doMonitoringTRT = False
+InDetFlags.doMonitoringAlignment = False
+
+# --- activate (memory/cpu) monitoring
+#InDetFlags.doPerfMon = True
+
+# --- activate ntuple writing for IDRecStat (if it is on)
+#InDetFlags.doStatNtuple = True
+
+# --- activate creation of standard plots
+#InDetFlags.doStandardPlots = True
+
+# --- produce various ntuples (all in one root file)
+#InDetFlags.doTrkNtuple = True
+#InDetFlags.doPixelTrkNtuple = True
+#InDetFlags.doVtxNtuple = True
+#InDetFlags.doConvVtxNtuple = True
+
+# activate the print InDetXYZAlgorithm statements
+InDetFlags.doPrintConfigurables = True
+
+from IOVDbSvc.CondDB import conddb;
+conddb.addOverride("/PIXEL/PixMapOverlay","PixMapOverlay-IBL-PERFECT");
+conddb.addOverride("/SCT/DAQ/Configuration/Geog","SctDaqConfigurationGeog-PERFECT-Aug10-01");
+conddb.addOverride("/SCT/DAQ/Configuration/ROD","SctDaqConfigurationRod-PERFECT-Aug10-01");
+conddb.addOverride("/SCT/DAQ/Configuration/RODMUR","SctDaqConfigurationRodmur-PERFECT-Aug10-01");
+conddb.addOverride("/SCT/DAQ/Configuration/MUR","SctDaqConfigurationMur-PERFECT-Aug10-01");
+conddb.addOverride("/SCT/DAQ/Configuration/Module","SctDaqConfigurationModule-PERFECT-Aug10-01");
+conddb.addOverride("/SCT/DAQ/Configuration/Chip","SctDaqConfigurationChip-PERFECT-Aug10-01");
+conddb.addOverride("/SCT/DAQ/Calibration/NPtGainDefects","SctDaqCalibrationNPtGainDefects-NOMINAL");
+conddb.addOverride("/SCT/DAQ/Calibration/NoiseOccupancyDefects","SctDaqCalibrationNoiseOccupancyDefects-NOMINAL")
+
+include("InDetIBL_Example/preInclude.IBL_Rec.py")
+include("InDetIBL_Example/NewLayerMaterial_03.py")
+include("InDetIBL_Example/preInclude.AllDetOn.py")
+
+# IMPORTANT NOTE: initialization of the flags and locking them is done in InDetRec_jobOptions.py!
+# This way RecExCommon just needs to import the properties without doing anything else!
+# DO NOT SET JOBPROPERTIES AFTER THIS LINE! The change will be ignored!
+include("InDetRecExample/InDetRec_all.py")
+
+include("InDetIBL_Example/postInclude.IBL_Rec.py")
+include("InDetIBL_Example/postInclude.IBL_NoAlign.py")
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKSim.TrigFTKSimConf import *
+
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks=True
+ToolSvc += FTKSGHit
+
+
+#FTKSGHit.OutputLevel=DEBUG
+# print "Add FTKDetector tool"
+# FTKDet = FTKDetectorTool()
+# FTKDet.doBadModuleMap = False # True to produce or False to read an existing one
+# FTKDet.useBadModuleMap = False # may disable the use of dead modules mapping
+# #FTKDet.BadSSMapPath = "badSSmap.bmap"
+# #FTKDet.FTK_BadModuleMapPath = "badModulemap_FTK.bmap"
+# #FTKDet.ATLAS_BadModuleMapPath = "badModulemap_ATLAS.bmap"
+# ToolSvc += FTKDet
+# #FTKDet.OutputLevel=DEBUG
+
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+#FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=DEBUG)
+FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=FATAL)
+#MC11 for 8L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8Lc.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+#MC11 for 11L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+#MC11 for IBL
+FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_12Libl.pmap"
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8LcIbl123.pmap"
+FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.imap2"
+
+#MC12 for IBL
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8LcIblEXPtoIBL.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.imap2"
+
+FTKBankGen.const_test_mode = False;
+#FTKBankGen.const_test_mode = True;
+#FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+#FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+
+FTKBankGen.Clustering = False;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+#FTKBankGen.SctClustering = False;
+FTKBankGen.PixelClusteringMode = 1;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 0.8;#GeV
+FTKBankGen.TRAIN_PDG = 13;#Traing samples particle ID
+FTKBankGen.NEvent = event;#event number
+FTKBankGen.NBanks = 64;
+FTKBankGen.BarrelOnly = False;
+FTKBankGen.rawMode = 1;
+FTKBankGen.UseIdentifierHash = True;
+
+FTKBankGen.par_c_max=0.0007;
+FTKBankGen.par_c_min=-0.0007;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=1;
+FTKBankGen.par_phi_min=-1;
+FTKBankGen.par_phi_slices=100;
+
+FTKBankGen.par_d0_max=2.2;
+FTKBankGen.par_d0_min=-2.2;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=120;
+FTKBankGen.par_z0_min=-120;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=3;
+FTKBankGen.par_eta_min=-3;
+FTKBankGen.par_eta_slices=100;
+
+alg += FTKBankGen # 1 alg, named "MyNewPackage"
+
+#-----------------------------------------------------------------------------
+# save ROOT histograms and Tuple
+#-----------------------------------------------------------------------------
+#from AthenaPoolCnvSvc.WriteAthenaPool import AthenaPoolOutputStream
+#Stream1 = AthenaPoolOutputStream( "Stream1" )
+#Stream1.OutputFile = "SimplePoolFile_Complete.root"
+
+#from GaudiSvc.GaudiSvcConf import THistSvc
+#ServiceMgr += THistSvc()
+#ServiceMgr.THistSvc.Output = [ "MyNewPackage DATAFILE='testAug21.root' OPT='RECREATE'" ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/FTKCachedBankGen_jobOptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/FTKCachedBankGen_jobOptions.py
new file mode 100644
index 00000000000..5db2ea59b9c
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/FTKCachedBankGen_jobOptions.py
@@ -0,0 +1,63 @@
+#--------------------------------------------------------------
+# Full job is a list of algorithms
+#--------------------------------------------------------------
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# Enable monitoring
+#--------------------------------------------------------------
+from PerfMonComps.PerfMonFlags import jobproperties
+jobproperties.PerfMonFlags.doSemiDetailedMonitoring = True
+
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+#--------------------------------------------------------------
+# initialize algo(s)
+#--------------------------------------------------------------
+CachedBankGen = FTKCachedBankGenAlgo("CachedBankGen")
+
+#--------------------------------------------------------------
+#
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import theApp
+# Number of events to be processed
+theApp.EvtMax = 1
+
+from AthenaCommon.AppMgr import ServiceMgr
+
+from GaudiSvc.GaudiSvcConf import THistSvc
+ServiceMgr += THistSvc()
+
+ServiceMgr.THistSvc.Output += ["outputHisto DATAFILE='outputHisto.root' OPT='RECREATE'"]
+
+#--------------------------------------------------------------
+# Set output level threshold (DEBUG, INFO, WARNING, ERROR, FATAL)
+#--------------------------------------------------------------
+CachedBankGen.OutputLevel = DEBUG
+
+
+#--------------------------------------------------------------
+# Algorithms Private Options
+#--------------------------------------------------------------
+
+ConfigDir = "/nfs/dust/atlas/user/britzger/19.3.0/Trigger/TrigFTK/TrigFTKSim/config/"
+CachedBankGen.ssmapAM_path = ConfigDir + "ss_file/raw_30x32x72Ibl.ss"
+
+CachedBankGen.curreg = 24 ## is indeed specified by the inputbank_path
+
+CachedBankGen.maxpatt = 4096*4096
+
+CachedBankGen.infile = "/afs/desy.de/user/b/britzger/dust/19.3.0/test.root"
+CachedBankGen.ccacheOut = "test.ccache.root"
+CachedBankGen.pcacheOut = "test.pcache.root"
+CachedBankGen.nSub = 1
+CachedBankGen.iSub = 0
+
+alg += CachedBankGen
+#==============================================================
+#
+# End of job options file
+#
+###############################################################
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_FTK.py b/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_FTK.py
new file mode 100644
index 00000000000..2799191e5f5
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_FTK.py
@@ -0,0 +1,17 @@
+evgenConfig.description = "Single muons with inv pt from 1 to 1000 GeV, |eta|<3 and special vertez"
+evgenConfig.keywords = ["singleparticle", "mu"]
+
+## Common setup for ParticleGenerator
+from ParticleGenerator.ParticleGeneratorConf import ParticleGenerator
+topAlg += ParticleGenerator()
+evgenConfig.generators = ["ParticleGenerator"]
+
+
+topAlg.ParticleGenerator.orders = [
+"PDGcode: sequence -13 13" ,
+ "invpt: flat 1.0e-6 1.3e-3",
+ "eta: flat -3.0 3.0",
+ "phi: flat -3.14159 3.14159",
+ "targetip: flat -2.2 2.2",
+ "vertZ: flat -120.0 120.0"
+ ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_x10_FTK.py b/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_x10_FTK.py
new file mode 100644
index 00000000000..f758b682d7b
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_mu_Pt1to1000_Eta30_x10_FTK.py
@@ -0,0 +1,21 @@
+evgenConfig.description = "Single muons with inv pt from 1 to 1000 GeV, |eta|<3 and special vertez"
+evgenConfig.keywords = ["singleparticle", "mu"]
+
+## Common setup for ParticleGenerator
+from ParticleGenerator.ParticleGeneratorConf import ParticleGenerator
+topAlg += ParticleGenerator()
+evgenConfig.generators = ["ParticleGenerator"]
+
+#multi-particle event
+nparticles = 10
+
+topAlg.ParticleGenerator.orders = []
+for ipart in xrange(nparticles) :
+ topAlg.ParticleGenerator.orders += [
+ "PDGcode[%d]: sequence -13 13" % ipart,
+ "invpt[%d]: flat 1.0e-6 1.3e-3" % ipart,
+ "eta[%d]: flat -3.0 3.0" % ipart,
+ "phi[%d]: flat -3.14159 3.14159" % ipart,
+ "targetip[%d]: flat -2.2 2.2" % ipart,
+ "vertZ[%d]: flat -120.0 120.0" % ipart
+ ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_FTK.py b/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_FTK.py
new file mode 100644
index 00000000000..722a9441fb5
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_FTK.py
@@ -0,0 +1,16 @@
+evgenConfig.description = "Single pions with inv pt from 1 to 1000 GeV, |eta|<3 and special vertez"
+evgenConfig.keywords = ["singleparticle", "pi"]
+
+i## Common setup for ParticleGenerator
+from ParticleGenerator.ParticleGeneratorConf import ParticleGenerator
+topAlg += ParticleGenerator()
+evgenConfig.generators = ["ParticleGenerator"]
+
+topAlg.ParticleGenerator.orders = [
+ "PDGcode: sequence -211 211",
+ "invpt: flat 1.0e-6 1.3e-3",
+ "eta: flat -3.0 3.0",
+ "phi: flat -3.14159 3.14159",
+ "targetip: flat -2.2 2.2",
+ "vertZ: flat -120.0 120.0"
+ ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_x10_FTK.py b/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_x10_FTK.py
new file mode 100644
index 00000000000..722a9441fb5
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/MC12.184002.ParticleGenerator_pi_Pt1to1000_Eta30_x10_FTK.py
@@ -0,0 +1,16 @@
+evgenConfig.description = "Single pions with inv pt from 1 to 1000 GeV, |eta|<3 and special vertez"
+evgenConfig.keywords = ["singleparticle", "pi"]
+
+i## Common setup for ParticleGenerator
+from ParticleGenerator.ParticleGeneratorConf import ParticleGenerator
+topAlg += ParticleGenerator()
+evgenConfig.generators = ["ParticleGenerator"]
+
+topAlg.ParticleGenerator.orders = [
+ "PDGcode: sequence -211 211",
+ "invpt: flat 1.0e-6 1.3e-3",
+ "eta: flat -3.0 3.0",
+ "phi: flat -3.14159 3.14159",
+ "targetip: flat -2.2 2.2",
+ "vertZ: flat -120.0 120.0"
+ ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/PattMergeRoot_jobOptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/PattMergeRoot_jobOptions.py
new file mode 100644
index 00000000000..dc1b826ce75
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/PattMergeRoot_jobOptions.py
@@ -0,0 +1,85 @@
+# Full job is a list of algorithms
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+# Enable monitoring
+from PerfMonComps.PerfMonFlags import jobproperties
+jobproperties.PerfMonFlags.doSemiDetailedMonitoring = True
+
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+PattMergeRoot = PattMergeRootAlgo("PattMergeRoot")
+
+from AthenaCommon.AppMgr import theApp
+# Number of events to be processed
+theApp.EvtMax = 1
+
+from AthenaCommon.AppMgr import ServiceMgr
+
+#from GaudiSvc.GaudiSvcConf import THistSvc
+#ServiceMgr += THistSvc()
+#
+#ServiceMgr.THistSvc.Output += ["outputHisto DATAFILE='outputHisto.root' OPT='RECREATE'"]
+
+#--------------------------------------------------------------
+# Set output level threshold (DEBUG, INFO, WARNING, ERROR, FATAL)
+#--------------------------------------------------------------
+
+# Output level for PattMergeRoot only
+PattMergeRoot.OutputLevel = INFO
+
+
+#--------------------------------------------------------------
+# Algorithms Private Options
+#--------------------------------------------------------------
+
+# Specify in which step of the algorithm the merging is performed
+# Possible options:
+# - initialize
+# - execute
+# - finalize
+PattMergeRoot.WhereToRunMerging = "initialize"
+
+# cut on coverage, applied to MERGED_ROOTFILE and OUT_FILE
+PattMergeRoot.MinCoverage = 2
+
+# output file (root or compressed text)
+# Specify output filename (must end with .root)
+# If additional the patterns shall be written in ascii/text
+# format specify 'TextOutFile' (.bz2 is added automatically).
+# If TextOutFile is empty do not write patterns in text format.
+PattMergeRoot.RootOutFile = "MergedPatterns.root"
+PattMergeRoot.TextOutFile = "" # e.g. "MergedPatterns"
+
+
+# temporary file, with all patterns, prior to merging
+# if no file is given, construct name by appending .textImport.root
+# to OUT_FILE
+PattMergeRoot.TextImportRootFile = ""
+
+# Do split output into NSub sub-regions
+PattMergeRoot.NSub = 0
+
+# Delete files after merging
+# (Deletes all specified .root-files)
+# If problem occured while importing text file, keep this text file
+PattMergeRoot.DeleteFilesAfterMerging = False
+
+# input files: various input formats can be mixed
+PattMergeRoot.InputFiles = [
+ "patterns_sub0.patt.bz2",
+ "patterns_sub1.patt.bz2",
+ "patterns_sub2.patt.bz2",
+ "patterns_sub3.root",
+ "patterns_sub4.root"
+]
+
+alg += PattMergeRoot
+
+
+#==============================================================
+#
+# End of job options file
+#
+###############################################################
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/bsub_find_extrapolation_relations.py b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/bsub_find_extrapolation_relations.py
new file mode 100755
index 00000000000..05b4b68168a
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/bsub_find_extrapolation_relations.py
@@ -0,0 +1,22 @@
+#!/bin/usr/python
+
+import os
+import sys
+
+for subregion in xrange(1):
+ for region in xrange(64):
+ line = ' > run_'+str(subregion)+'_'+str(region)+'.sh'
+ cmd = 'cd '+os.getcwd()
+ os.system('echo '+cmd+line)
+ #cmd = 'python ../bin/find_X11_relations.py sectors_raw_8L_4M_reg%s_sub%s.patt.bz2 4'% (region, subregion)
+ cmd = '"setupATLAS; localSetupROOT;'
+ #cmd += 'python ../bin/find_extrapolation_relations.py sectors_raw_8L_4M_reg%s_sub%s.patt.bz2 4"'% (region, subregion)
+ cmd = 'python ../make_conn/find_extrapolation_relations_v2.py sectors_raw_8L_reg%s.patt.bz2 1'% (region)
+ print cmd
+ #os.system( cmd )
+ line = ' >> run_'+str(subregion)+'_'+str(region)+'.sh'
+ os.system('echo '+cmd+line)
+ os.system('chmod 755 '+'run_'+str(subregion)+'_'+str(region)+'.sh')
+ os.system('sleep 2')
+ print subregion,region
+ os.system('bsub -q 1nh '+'run_'+str(subregion)+'_'+str(region)+'.sh')
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/find_extrapolation_relations.py b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/find_extrapolation_relations.py
new file mode 100755
index 00000000000..928ef6c2342
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/find_extrapolation_relations.py
@@ -0,0 +1,485 @@
+#!/usr/bin/python
+
+import ftkutils
+import sys
+import os.path
+
+#### OPTION ####
+###############
+XL='8'
+XL2nd = '12'
+Config8La = [0,1,2,3,4, 5,None,6,None,7,None]
+Config8Lb = [0,1,2,3,None,4,5, 6,None,7,None]
+Config8Lc = [0,1,2,3,None,4,None,5,6, 7,None]
+Config8Ld = [0,1,2,3,None,4,None,5,None,6,7 ]
+#Configge = [0,1,2,3,4 ,5,6 ,7,8 ,9,10 ]
+
+Config1stStage = Config8Lc # CHOOSING 8Lc configuration
+
+# standard conversion map from 7L to 11L
+if XL2nd=='11':
+ if XL=='7':
+ convXLtoXL2nd = [0,1,2,3,None,4,None,5,None,6,None]
+ elif XL=='8':
+ convXLtoXL2nd = Config1stStage
+elif XL2nd=='12':
+ if XL=='7':
+ convXLtoXL2nd = [None,0,1,2,3,None,4,None,5,None,6,None]
+ elif XL=='8':
+ convXLtoXL2nd = [None] + Config1stStage
+###############
+
+
+
+
+
+###########################################################################
+# Print statement handler
+#--------------------------------------------------------------------------
+#
+def Print(arg):
+ print sys.argv[0],': ', arg
+#--------------------------------------------------------------------------
+
+
+
+###########################################################################
+# Help
+#--------------------------------------------------------------------------
+def help():
+ print 'example of running the code'
+ print 'python %s sectors_raw_7L_16M_reg0_sub4.patt.bz2 16'%sys.argv[0]
+
+
+if len(sys.argv)<2:
+ help()
+ sys.exit()
+
+
+
+
+###########################################################################
+# Passed argument handling
+#--------------------------------------------------------------------------
+
+
+# Standard arguments
+filename_XL_sector = sys.argv[1] # filename of 7L sector e.g. sectors_raw_7L_16M_reg7_sub14.patt.bz2
+nsubregions = int(sys.argv[2]) # number of subregions to be dealt with, 0-16
+
+# Output to a File? or STDOUT?
+try:
+ sys.argv[3]
+ output = open(sys.argv[3],'w')
+except:
+ output = sys.stdout
+#--------------------------------------------------------------------------
+
+
+
+
+#-----------------------------------
+# Probably Nothing
+#g = open('test.out','w')
+#count = 0
+
+#h = open('test_nonematch.out','w')
+#h1 = open('test_all.out','w')
+#-----------------------------------
+
+
+
+###########################################################################
+# Load PyROOT
+#--------------------------------------------------------------------------
+
+try:
+ import ROOT
+ hasROOT = True
+except ImportError :
+ Print('ROOT library not found, histogram book keeping disabled')
+ hasROOT = False
+#--------------------------------------------------------------------------
+
+
+
+
+
+###########################################################################
+# Load 7L sector bank
+#--------------------------------------------------------------------------
+Print('Load sector in ' + filename_XL_sector)
+
+LX_sector_bank = ftkutils.PatternBank(filename_XL_sector)
+LX_sector_bank.LoadPatterns()
+
+# create a KD-Tree representation for this bank
+LX_kdtree_bank = LX_sector_bank.BuildKDTree()
+#--------------------------------------------------------------------------
+
+
+
+###########################################################################
+# Parse region ID and subregion ID from the 7L sector bank name
+# e.g. from 1st passed arg: sectors_raw_7L_16M_reg'7'_sub'14'.patt.bz2
+#--------------------------------------------------------------------------
+
+regid = None
+subid = None
+
+filename_XL_sector_items = filename_XL_sector.split('_')
+
+for item in filename_XL_sector_items :
+
+ if item[0:3] == 'reg' :
+ regid = int(item.split('.')[0][3:])
+
+ elif item[0:3] == 'sub' :
+ subid = int(item.split('.')[0][3:])
+
+# Print
+Print('Region ' + str(regid))
+Print('Sub-region ' + str(subid))
+#--------------------------------------------------------------------------
+
+
+
+
+
+###########################################################################
+# Set the output file
+#--------------------------------------------------------------------------
+
+# starting from the 7L sector name
+tmp = os.path.basename(filename_XL_sector) #sectors_raw_7L_16M_reg'7'_sub'14'.patt.bz2
+
+# strip additional extension
+tmp = tmp.rstrip('.bz2') #sectors_raw_7L_16M_reg'7'_sub'14'.patt
+
+filename_conn = tmp.replace('.patt','.conn') #sectors_raw_7L_16M_reg'7'_sub'14'.conn
+filename_otoc = tmp.replace('.patt','.otoc') #sectors_raw_7L_16M_reg'7'_sub'14'.otoc
+
+tmp = tmp.replace('sectors','corrgen')
+tmp = tmp.replace('.patt','.gcon')
+
+filename_gcon = tmp.replace(XL+'L',XL+XL2nd+'L') #corrgen_raw_711L_16M_reg'7'_sub'14'.gcon
+
+# Open up each output file
+file_conn = open(filename_conn,'w')
+file_otoc = open(filename_otoc,'w')
+file_gcon = open(filename_gcon,'w')
+
+# print
+Print('Output in: ' + filename_conn)
+Print('Output in: ' + filename_otoc)
+Print('Output in: ' + filename_gcon)
+#--------------------------------------------------------------------------
+
+###########################################################################
+# Set the output file
+#--------------------------------------------------------------------------
+if hasROOT :
+ if subid != None:
+ rootfile = ROOT.TFile.Open("relation_histo_reg%d_sub%d.root" % (regid,subid),"recreate")
+ else:
+ rootfile = ROOT.TFile.Open("relation_histo_reg%d.root" % (regid),"recreate")
+ histo_nrelations = ROOT.TH1F("histo_nrelations","Relations",
+ 8,-.5,7.5);
+ histo_nrelations.SetXTitle("# "+XL+"L #rightarrow "+XL2nd+"L relations")
+ histo_nrelations.SetYTitle("# "+XL+"L sectors")
+ histo_nrelsub = []
+ for i in xrange(nsubregions) :
+ histo_nrelsub.append(ROOT.TH1F("histo_nrelsub%d" % i, "Relations sub %d" % i, 8,-.5,7.5))
+#--------------------------------------------------------------------------
+
+
+
+
+
+###########################################################################
+# Load sector and constants for 11 layer
+#--------------------------------------------------------------------------
+
+XL2nd_sector_banks = []
+XL2nd_kdtree_banks = []
+
+# Loop over all subregions (between 0-16 depending on the sys.argv[2])
+# then load all the 11L sector banks for finding relations
+for i_subreg in xrange(nsubregions) :
+
+ # Following creates sectors_raw_11L_16M_reg'7'_sub'i_subreg'.patt.bz2
+ tmp = filename_XL_sector.replace(XL+"L",XL2nd+"L")
+ if subid != None:
+ tmp = tmp.replace("sub%d" % subid,"sub%d" % i_subreg)
+ filename_XL2nd_sector = tmp
+
+ Print("Load sector in "+ filename_XL2nd_sector)
+
+ tmpbank = ftkutils.PatternBank(filename_XL2nd_sector)
+ tmpbank.LoadPatterns()
+
+ # append to the global sector bank list
+ XL2nd_sector_banks.append( tmpbank )
+
+ # create a KD-Tree representation for this bank
+ XL2nd_kdtree_banks.append( tmpbank.BuildKDTree() )
+
+# load constants from the constant files (11-layer constant)
+
+XL2nd_constant_banks = []
+
+for i in xrange(nsubregions) :
+
+ # Following creates /path/to/my/bank/gcon/corrgen_raw_11L_16M_reg'7'_sub'i_subreg'.gcon.bz2
+ tmp = os.path.abspath(filename_XL_sector)
+ tmpbase = os.path.basename(tmp)
+ tmpdirpath = os.path.dirname(tmp)
+ tmpbase = tmpbase.replace(XL+"L",XL2nd+"L")
+ if subid != None:
+ tmpbase = tmpbase.replace("sub%d" % subid,"sub%d" % i)
+ tmpbase = tmpbase.replace(".patt",".gcon")
+ tmpbase = tmpbase.replace("sectors","corrgen")
+ tmpdirpath = tmpdirpath.replace("/patt","/gcon")
+ filename_XL2nd_sector_gcon = os.path.join(tmpdirpath, tmpbase)
+
+ Print("Load constant in "+filename_XL2nd_sector_gcon)
+
+ tmpbank = ftkutils.ConstantBank(filename_XL2nd_sector_gcon)
+ tmpbank.LoadConstants()
+
+ for i, constant in enumerate(tmpbank.constants):
+ if constant.pid != str(i):
+ print 'pid does not match the index', constant.pid,
+
+ # Append to global constant bank list
+ XL2nd_constant_banks.append( tmpbank )
+#--------------------------------------------------------------------------
+
+
+
+
+
+###########################################################################
+# Write header for gcon files
+#--------------------------------------------------------------------------
+file_gcon.write("! *** RECONSTRUCTION GEOMETRY CONSTANTS ***\n")
+file_gcon.write("\n")
+file_gcon.write("Version 2 ! File format version number\n")
+file_gcon.write("\n")
+file_gcon.write("! *** PHI is now in GLOBAL coordinate system ***\n")
+file_gcon.write(" NPLANES\n")
+file_gcon.write(" %s\n"%XL2nd)
+file_gcon.write(" NSECTORS\n")
+file_gcon.write(str(LX_sector_bank.npatterns) +"\n")
+file_gcon.write(" NDIM\n")
+file_gcon.write(" 2\n")
+#--------------------------------------------------------------------------
+
+
+
+
+###########################################################################
+# Heart of this file
+#--------------------------------------------------------------------------
+
+# deprecated__________________________
+#inversion_list = [4,6] # list of 7L layer that in 11L ECP map are stereo
+# deprecated__________________________
+
+# create the elements used to search the similar
+tocheck = ftkutils.Pattern(int(XL2nd))
+
+
+###########################################################################
+# Diagonosis plots
+#--------------------------------------------------------------------------
+
+if hasROOT:
+ h_n_conn = ROOT.TH1F('h_n_conn','h_n_conn',12,-.5,11.5);
+ h_coverage = ROOT.TH1F('h_coverage','h_coverage',11,0.5,11.5);
+
+
+# global counter of sector ID for new constant set
+counter = 0;
+gcon_counter = 0;
+
+# loop of the reference 7L bank
+for LX_pattern in LX_sector_bank.patterns :
+
+ # Print the current LX_pattern information (SSID, coverage)
+ # Looks like. "Check: ID 0 SSs 17007 30007 40007 25007 31007 37007 43007 in 0 cov 9661"
+ print ''
+ print ''
+ print 'Initial LX_pattern... : ',
+ LX_pattern.PrintToFile(output)
+
+
+ # ----------------------------------------------------------------
+ # expand the 7L in an 11L pattern
+ # Following for loop creates something like
+ # [SSID0,SSID1,SSID2,SSID3,-1,SSID4,-1,SSID5,-1,SSID6,-1]
+ #
+ for i in xrange(int(XL2nd)) :
+ if convXLtoXL2nd[i] == None :
+ tocheck.ssid[i] = -1
+ else :
+ tocheck.ssid[i] = LX_pattern.ssid[convXLtoXL2nd[i]]
+
+
+ if XL2nd=='11':
+ if XL=='7':
+ stereoID = [4,8,10]
+ elif XL=='8':
+ stereoID = [4,6,10]
+ else:
+ if XL=='7':
+ stereoID = [0,5,9,11]
+ elif XL=='8':
+ stereoID = [0,5,7,11]
+ stereoLayer_indices = [0,1,3]
+
+ # Printing
+ print " |"
+ print " processed into L%s_pattern"%XL2nd
+ print " |"
+ print " Final L%s_pattern... "%XL2nd,
+ tocheck.PrintToFile(output)
+ print "Stereo layers:", stereoID
+
+
+ # ----------------------------------------------------------------
+ # loop over all the subregions 11L banks
+ #
+ matched_XL2nd_sector_infos = [] # This will hold matched 11L sectors
+ for i_subreg in xrange(nsubregions) :
+
+ # return the list of similar patterns
+ matched_XL2nd_sector_infos_sub = XL2nd_kdtree_banks[i_subreg].FindNode(tocheck)
+
+
+ if hasROOT :
+ histo_nrelsub[i_subreg].Fill(len(matched_XL2nd_sector_infos_sub))
+
+ # add the similar pattern in this sector in the global list
+ for node in matched_XL2nd_sector_infos_sub :
+ isin = False
+ for iold in xrange(len(matched_XL2nd_sector_infos)) :
+ if matched_XL2nd_sector_infos[iold][1].pattern.coverage < node.pattern.coverage :
+ matched_XL2nd_sector_infos[iold:iold] = [[i_subreg,node]]
+ isin = True
+ break
+ if not isin :
+ matched_XL2nd_sector_infos.append([i_subreg,node])
+
+ if hasROOT :
+ histo_nrelations.Fill(len(matched_XL2nd_sector_infos))
+
+ # print the connecton for this 7L pattern
+ #file_conn.write("%d %d" % (LX_pattern.pid, len(matched_XL2nd_sector_infos))) #for allowing multiple correspondence to be printed out in .conn file ## deprecated
+
+
+ # ----------------------------------------------------------------
+ # Here we force so we only write only 1 matched pattern, so num_matched_XL2nd is always either 0 or 1
+ #
+ #num_matched_XL2nd = 0
+ #if len(matched_XL2nd_sector_infos) >=1:
+ # num_matched_XL2nd = 1
+ num_matched_XL2nd = len(matched_XL2nd_sector_infos)
+
+ # Each line will start with LX_pattern_pid, and 0 or 1 always,
+ file_conn.write("%d %d" % (LX_pattern.pid, num_matched_XL2nd))
+
+
+
+ # ----------------------------------------------------------------
+ # Here we process each LX_pattern_pid and finish up writing the content
+ #
+ file_otoc.write("%d" % (LX_pattern.pid))
+
+ if hasROOT:
+ h_n_conn.Fill(len(matched_XL2nd_sector_infos))
+ for i in xrange(len(matched_XL2nd_sector_infos)):
+ print matched_XL2nd_sector_infos[i][1].pattern.coverage
+ h_coverage.Fill(i+1,matched_XL2nd_sector_infos[i][1].pattern.coverage)
+ #if i==0:
+ # h_coverage.Fill(0,matched_XL2nd_sector_infos[i][1].pattern.coverage)
+ #else:
+ # h_coverage.Fill(1,matched_XL2nd_sector_infos[i][1].pattern.coverage)
+
+ if len(matched_XL2nd_sector_infos)!=0:
+
+ for iconn in xrange(len(matched_XL2nd_sector_infos)):
+ # L11_sector with largest coverage is the first element of matched_XL2nd_sector_infos
+ XL2nd_info_lg_cov = matched_XL2nd_sector_infos[iconn]
+ sub_id_lg_cov = XL2nd_info_lg_cov[0]
+ matched_XL2nd_lg_cov = XL2nd_info_lg_cov[1].pattern
+
+ # L11 info is written here.
+ file_otoc.write(" %d" % sub_id_lg_cov)
+ file_otoc.write(" %d" % matched_XL2nd_lg_cov.pid)
+
+ for i in matched_XL2nd_lg_cov.ssid:
+ file_otoc.write(" "+str(i))
+
+ file_otoc.write(" %d" % XL2nd_info_lg_cov[1].pattern.coverage)
+ file_otoc.write("\n")
+
+
+ tmpcon = XL2nd_constant_banks[sub_id_lg_cov].FindConstant(matched_XL2nd_lg_cov.pid)
+ # DEBUG ----->
+ #if str(XL2nd_constant_banks[1].constants[5056].pid)!='5056':
+ # print 'Montor this :', LX_pattern.pid, XL2nd_constant_banks[1].constants[5056].pid
+ # sys.exit()
+ # DEBUG -----|
+ try:
+ #tmpcon.PrintToFile(file_gcon, LX_pattern.pid)
+ tmpcon.PrintToFile(file_gcon, gcon_counter)
+ gcon_counter+=1
+ except:
+ print matched_XL2nd_lg_cov.pid, sub_id_lg_cov
+ sys.exit()
+
+
+ else:
+ file_otoc.write("\n")
+ #ftkutils.Constant(int(XL2nd),LX_pattern.pid).PrintToFile(file_gcon)
+
+ for matched_XL2nd_sector_info in matched_XL2nd_sector_infos :
+ print "Find: ",
+ matched_XL2nd_sector_info[1].pattern.PrintToFile(output)
+ #file_conn.write(" %d %d" % (matched_XL2nd_sector_info[0],matched_XL2nd_sector_info[1].pattern.pid))
+ file_conn.write(" %d %d" % (matched_XL2nd_sector_info[0],counter))
+ counter+=1
+ for ip in xrange(len(stereoID)) :
+ file_conn.write(" "+str(matched_XL2nd_sector_info[1].pattern.ssid[stereoID[ip]]))
+ #break # force only one connection
+ file_conn.write("\n")
+ if gcon_counter != counter:
+ sys.exit("counters don't match")
+ #break #debug
+
+# Print final message
+Print('')
+Print('')
+Print('')
+Print('This find relations session has sucessfully ended')
+
+if hasROOT :
+ h_n_conn.Write()
+ h_coverage.Write()
+ rootfile.Write()
+ rootfile.Close()
+file_conn.close()
+
+# Fix the total number of sectors
+print "fixing"
+file_gcon_copy = open(filename_gcon,'r')
+lines = file_gcon_copy.readlines()
+file_gcon = open(filename_gcon,'w')
+for i, line in enumerate(lines):
+ if i==8:
+ file_gcon.write("%d\n"%(gcon_counter-1));
+ else:
+ file_gcon.write(line);
+
+#eof
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/find_extrapolation_relations_v2.py b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/find_extrapolation_relations_v2.py
new file mode 100755
index 00000000000..d020c3ee96a
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/find_extrapolation_relations_v2.py
@@ -0,0 +1,429 @@
+#!/usr/bin/python
+
+import ftkutils
+import sys
+import os.path
+
+#### OPTION ####
+###############
+XL='8'
+XL2nd = '12'
+Config1stStage = [0,1,2,3,None,4,None,5,6, 7,None]
+
+# standard conversion map from 1st stage to 2nd stage
+convXLtoXL2nd = [None] + Config1stStage
+###############
+
+
+
+
+
+###########################################################################
+# Print statement handler
+#--------------------------------------------------------------------------
+#
+def Print(arg):
+ print sys.argv[0],': ', arg
+#--------------------------------------------------------------------------
+
+
+
+###########################################################################
+# Help
+#--------------------------------------------------------------------------
+def help():
+ print 'example of running the code'
+ print 'python %s sectors_raw_8L_16M_reg0_sub4.patt.bz2 16'%sys.argv[0]
+
+
+if len(sys.argv)<2:
+ help()
+ sys.exit()
+
+
+
+
+###########################################################################
+# Passed argument handling
+#--------------------------------------------------------------------------
+
+
+# Standard arguments
+filename_XL_sector = sys.argv[1] # filename of 8L sector e.g. sectors_raw_8L_16M_reg7_sub14.patt.bz2
+nsubregions = int(sys.argv[2]) # number of subregions to be dealt with, 0-16
+
+# Output to a File? or STDOUT?
+try:
+ sys.argv[3]
+ output = open(sys.argv[3],'w')
+except:
+ output = sys.stdout
+#--------------------------------------------------------------------------
+
+
+
+###########################################################################
+# Load PyROOT
+#--------------------------------------------------------------------------
+
+try:
+ import ROOT
+ hasROOT = True
+except ImportError :
+ Print('ROOT library not found, histogram book keeping disabled')
+ hasROOT = False
+#--------------------------------------------------------------------------
+
+
+
+
+
+###########################################################################
+# Load 8L sector bank
+#--------------------------------------------------------------------------
+Print('Load sector in ' + filename_XL_sector)
+
+LX_sector_bank = ftkutils.PatternBank(filename_XL_sector)
+LX_sector_bank.LoadPatterns()
+
+# create a KD-Tree representation for this bank
+LX_kdtree_bank = LX_sector_bank.BuildKDTree()
+#--------------------------------------------------------------------------
+
+
+
+###########################################################################
+# Parse region ID and subregion ID from the 8L sector bank name
+# e.g. from 1st passed arg: sectors_raw_8L_16M_reg'7'_sub'14'.patt.bz2
+#--------------------------------------------------------------------------
+
+regid = None
+subid = None
+
+filename_XL_sector_items = filename_XL_sector.split('_')
+
+for item in filename_XL_sector_items :
+
+ if item[0:3] == 'reg' :
+ regid = int(item.split('.')[0][3:])
+
+ elif item[0:3] == 'sub' :
+ subid = int(item.split('.')[0][3:])
+
+# Print
+Print('Region ' + str(regid))
+Print('Sub-region ' + str(subid))
+#--------------------------------------------------------------------------
+
+
+
+
+
+###########################################################################
+# Set the output file
+#--------------------------------------------------------------------------
+
+# starting from the 8L sector name
+tmp = os.path.basename(filename_XL_sector) #sectors_raw_8L_16M_reg'7'_sub'14'.patt.bz2
+
+# strip additional extension
+tmp = tmp.rstrip('.bz2') #sectors_raw_8L_16M_reg'7'_sub'14'.patt
+
+filename_conn = tmp.replace('.patt','.conn') #sectors_raw_8L_16M_reg'7'_sub'14'.conn
+filename_otoc = tmp.replace('.patt','.otoc') #sectors_raw_8L_16M_reg'7'_sub'14'.otoc
+
+tmp = tmp.replace('sectors','corrgen')
+tmp = tmp.replace('.patt','.gcon')
+
+filename_gcon = tmp.replace(XL+'L',XL+XL2nd+'L') #corrgen_raw_712L_16M_reg'7'_sub'14'.gcon
+
+# Open up each output file
+file_conn = open(filename_conn,'w')
+file_otoc = open(filename_otoc,'w')
+file_gcon = open(filename_gcon,'w')
+
+# print
+Print('Output in: ' + filename_conn)
+Print('Output in: ' + filename_otoc)
+Print('Output in: ' + filename_gcon)
+#--------------------------------------------------------------------------
+
+
+
+
+###########################################################################
+# Set the output file
+#--------------------------------------------------------------------------
+if hasROOT :
+ if subid != None:
+ rootfile = ROOT.TFile.Open("relation_histo_reg%d_sub%d.root" % (regid,subid),"recreate")
+ else:
+ rootfile = ROOT.TFile.Open("relation_histo_reg%d.root" % (regid),"recreate")
+ histo_nrelations = ROOT.TH1F("histo_nrelations","Relations",
+ 8,-.5,7.5);
+ histo_nrelations.SetXTitle("# "+XL+"L #rightarrow "+XL2nd+"L relations")
+ histo_nrelations.SetYTitle("# "+XL+"L sectors")
+ histo_nrelsub = []
+ for i in xrange(nsubregions) :
+ histo_nrelsub.append(ROOT.TH1F("histo_nrelsub%d" % i, "Relations sub %d" % i, 8,-.5,7.5))
+#--------------------------------------------------------------------------
+
+
+
+
+
+###########################################################################
+# Load sector and constants for 12 layer
+#--------------------------------------------------------------------------
+
+XL2nd_sector_banks = []
+XL2nd_kdtree_banks = []
+
+# Loop over all subregions (between 0-16 depending on the sys.argv[2])
+# then load all the 12L sector banks for finding relations
+for i_subreg in xrange(nsubregions) :
+
+ # Following creates sectors_raw_12L_16M_reg'7'_sub'i_subreg'.patt.bz2
+ tmp = filename_XL_sector.replace(XL+"L",XL2nd+"L")
+ if subid != None:
+ tmp = tmp.replace("sub%d" % subid,"sub%d" % i_subreg)
+ filename_XL2nd_sector = tmp
+
+ Print("Load sector in "+ filename_XL2nd_sector)
+
+ tmpbank = ftkutils.PatternBank(filename_XL2nd_sector)
+ tmpbank.LoadPatterns()
+
+ # append to the global sector bank list
+ XL2nd_sector_banks.append( tmpbank )
+
+ # create a KD-Tree representation for this bank
+ XL2nd_kdtree_banks.append( tmpbank.BuildKDTree() )
+
+# load constants from the constant files (12-layer constant)
+
+XL2nd_constant_banks = []
+
+for i in xrange(nsubregions) :
+
+ # Following creates /path/to/my/bank/gcon/corrgen_raw_12L_16M_reg'7'_sub'i_subreg'.gcon.bz2
+ tmp = os.path.abspath(filename_XL_sector)
+ tmpbase = os.path.basename(tmp)
+ tmpdirpath = os.path.dirname(tmp)
+ tmpbase = tmpbase.replace(XL+"L",XL2nd+"L")
+ if subid != None:
+ tmpbase = tmpbase.replace("sub%d" % subid,"sub%d" % i)
+ tmpbase = tmpbase.replace(".patt",".gcon")
+ tmpbase = tmpbase.replace("sectors","corrgen")
+ tmpdirpath = tmpdirpath.replace("/patt","/gcon")
+ filename_XL2nd_sector_gcon = os.path.join(tmpdirpath, tmpbase)
+
+ Print("Load constant in "+filename_XL2nd_sector_gcon)
+
+ tmpbank = ftkutils.ConstantBank(filename_XL2nd_sector_gcon)
+ tmpbank.LoadConstants()
+
+ for i, constant in enumerate(tmpbank.constants):
+ if constant.pid != str(i):
+ print 'pid does not match the index', constant.pid,
+
+ # Append to global constant bank list
+ XL2nd_constant_banks.append( tmpbank )
+#--------------------------------------------------------------------------
+
+
+
+
+
+###########################################################################
+# Write header for gcon files
+#--------------------------------------------------------------------------
+file_gcon.write("! *** RECONSTRUCTION GEOMETRY CONSTANTS ***\n")
+file_gcon.write("\n")
+file_gcon.write("Version 2 ! File format version number\n")
+file_gcon.write("\n")
+file_gcon.write("! *** PHI is now in GLOBAL coordinate system ***\n")
+file_gcon.write(" NPLANES\n")
+file_gcon.write(" %s\n"%XL2nd)
+file_gcon.write(" NSECTORS\n")
+file_gcon.write(str(LX_sector_bank.npatterns) +"\n")
+file_gcon.write(" NDIM\n")
+file_gcon.write(" 2\n")
+#--------------------------------------------------------------------------
+
+
+
+
+###########################################################################
+# Heart of this file
+#--------------------------------------------------------------------------
+
+# deprecated__________________________
+#inversion_list = [4,6] # list of 8L layer that in 11L ECP map are stereo
+# deprecated__________________________
+
+# create the elements used to search the similar
+tocheck = ftkutils.Pattern(int(XL2nd))
+
+
+###########################################################################
+# Diagonosis plots
+#--------------------------------------------------------------------------
+
+if hasROOT:
+ h_n_conn = ROOT.TH1F('h_n_conn','h_n_conn',12,-.5,11.5);
+ h_coverage = ROOT.TH1F('h_coverage','h_coverage',11,0.5,11.5);
+
+
+# global counter of sector ID for new constant set
+counter = 0;
+gcon_counter = 0;
+
+# loop of the reference 8L bank
+for LX_pattern in LX_sector_bank.patterns :
+
+ # Print the current LX_pattern information (SSID, coverage)
+ # Looks like. "Check: ID 0 SSs 17007 30007 40007 25007 31007 37007 43007 in 0 cov 9661"
+ print ''
+ print ''
+ print 'Initial LX_pattern... : ',
+ LX_pattern.PrintToFile(output)
+
+
+ # ----------------------------------------------------------------
+ # expand the 8L in an 12L pattern
+ # Following for loop creates something like
+ # [SSID0,SSID1,SSID2,SSID3,-1,SSID4,-1,SSID5,-1,SSID6,-1]
+ #
+ for i in xrange(int(XL2nd)) :
+ if convXLtoXL2nd[i] == None :
+ tocheck.ssid[i] = -1
+ else :
+ tocheck.ssid[i] = LX_pattern.ssid[convXLtoXL2nd[i]]
+
+ stereoID = [0,5,7,11]
+ stereoLayer_indices = [0,1,3]
+
+ # Printing
+ print " |"
+ print " processed into L%s_pattern"%XL2nd
+ print " |"
+ print " Final L%s_pattern... "%XL2nd,
+ tocheck.PrintToFile(output)
+ print "Stereo layers:", stereoID
+
+
+ # ----------------------------------------------------------------
+ # loop over all the subregions 12L banks
+ #
+ matched_XL2nd_sector_infos = [] # This will hold matched 12L sectors
+ for i_subreg in xrange(nsubregions) :
+
+ # return the list of similar patterns
+ matched_XL2nd_sector_infos_sub = XL2nd_kdtree_banks[i_subreg].FindNode(tocheck)
+
+ if hasROOT :
+ histo_nrelsub[i_subreg].Fill(len(matched_XL2nd_sector_infos_sub))
+
+ # add the similar pattern in this sector in the global list
+ for node in matched_XL2nd_sector_infos_sub :
+ isin = False
+ for iold in xrange(len(matched_XL2nd_sector_infos)) :
+ if matched_XL2nd_sector_infos[iold][1].pattern.coverage < node.pattern.coverage :
+ matched_XL2nd_sector_infos[iold:iold] = [[i_subreg,node]]
+ isin = True
+ break
+ if not isin :
+ matched_XL2nd_sector_infos.append([i_subreg,node])
+
+ if hasROOT :
+ histo_nrelations.Fill(len(matched_XL2nd_sector_infos))
+
+ # Start the line for the connection file "SECTORID NCONN"
+ num_matched_XL2nd = len(matched_XL2nd_sector_infos)
+ file_conn.write("%d %d" % (LX_pattern.pid, num_matched_XL2nd))
+
+
+ # ----------------------------------------------------------------
+ # Here we process each LX_pattern_pid and finish up writing the content
+ #
+ file_otoc.write("%d" % (LX_pattern.pid))
+
+ if hasROOT:
+ h_n_conn.Fill(len(matched_XL2nd_sector_infos))
+ for i in xrange(len(matched_XL2nd_sector_infos)):
+ #print matched_XL2nd_sector_infos[i][1].pattern.coverage
+ h_coverage.Fill(i+1,matched_XL2nd_sector_infos[i][1].pattern.coverage)
+
+ # If we have connections
+ if len(matched_XL2nd_sector_infos)!=0:
+ # loop over connection
+ for iconn in xrange(len(matched_XL2nd_sector_infos)):
+ # L12_sector with largest coverage is the first element of matched_XL2nd_sector_infos
+ XL2nd_info_lg_cov = matched_XL2nd_sector_infos[iconn]
+ sub_id_lg_cov = XL2nd_info_lg_cov[0]
+ matched_XL2nd_lg_cov = XL2nd_info_lg_cov[1].pattern
+
+ # L12 info is written here.
+ file_otoc.write(" %d" % sub_id_lg_cov)
+ file_otoc.write(" %d" % matched_XL2nd_lg_cov.pid)
+
+ for i in matched_XL2nd_lg_cov.ssid:
+ file_otoc.write(" "+str(i))
+
+ file_otoc.write(" %d" % XL2nd_info_lg_cov[1].pattern.coverage)
+ file_otoc.write("\n")
+
+
+ tmpcon = XL2nd_constant_banks[sub_id_lg_cov].FindConstant(matched_XL2nd_lg_cov.pid)
+ # DEBUG ----->
+ #if str(XL2nd_constant_banks[1].constants[5056].pid)!='5056':
+ # print 'Montor this :', LX_pattern.pid, XL2nd_constant_banks[1].constants[5056].pid
+ # sys.exit()
+ # DEBUG -----|
+ try:
+ tmpcon.PrintToFile(file_gcon, gcon_counter)
+ gcon_counter+=1
+ except:
+ print matched_XL2nd_lg_cov.pid, sub_id_lg_cov
+ sys.exit()
+
+ else:
+ file_otoc.write("\n")
+
+ for matched_XL2nd_sector_info in matched_XL2nd_sector_infos :
+ print "Find: ",
+ matched_XL2nd_sector_info[1].pattern.PrintToFile(output)
+ file_conn.write(" %d %d" % (matched_XL2nd_sector_info[0],counter))
+ counter+=1
+ for ip in xrange(len(stereoID)) :
+ file_conn.write(" "+str(matched_XL2nd_sector_info[1].pattern.ssid[stereoID[ip]]))
+ file_conn.write("\n")
+ if gcon_counter != counter:
+ sys.exit("counters don't match")
+
+# Print final message
+Print('')
+Print('')
+Print('')
+Print('This find relations session has sucessfully ended')
+
+if hasROOT :
+ h_n_conn.Write()
+ h_coverage.Write()
+ rootfile.Write()
+ rootfile.Close()
+file_conn.close()
+
+# Fix the total number of sectors
+print "fixing"
+file_gcon_copy = open(filename_gcon,'r')
+lines = file_gcon_copy.readlines()
+file_gcon = open(filename_gcon,'w')
+for i, line in enumerate(lines):
+ if i==8:
+ file_gcon.write("%d\n"%(gcon_counter-1));
+ else:
+ file_gcon.write(line);
+
+#eof
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/ftkutils.py b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/ftkutils.py
new file mode 100644
index 00000000000..d996fa26570
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/ftkutils.py
@@ -0,0 +1,809 @@
+import sys
+import bz2, gzip
+from math import sqrt, atan, atan2, tan, log
+
+if __name__ == "__main__" :
+ print "Why are you using this code interactively?"
+ sys.exit(1)
+
+class FTKPlaneSection :
+ """This class contains the details on each detector plane"""
+ def __init__(self) :
+ return None
+
+class FTKPlaneMap :
+ """This class stores a summary of the plane map"""
+ def __init__(self,fname) :
+ pmapfile = open(fname,"r")
+ # form on the next structur
+ # [Ecp: [Pxl[layer],Sct[Layers], Barrel: ...]
+ self.data = [[{},{}],[{},{}]]
+
+
+ nPXLBar = 0
+ nPXLEcp = 0
+ nSCTBar = 0
+ nSCTEcp = 0
+ NMaxLayer = 0
+ for i, line in enumerate(pmapfile) :
+ vals = line.split()
+
+ if i<4 : # first 4 lines are an header
+ print line[:-1]
+ if i == 0 :
+ nPXLBar = int(vals[0])
+ elif i == 1 :
+ nPXLEcp = int(vals[0])
+ elif i == 2:
+ nSCTBar = int(vals[0])
+ elif i == 3 :
+ nSCTEcp = int(vals[0])
+ continue
+
+ # for each layer stores the relative logical layer ID
+ if vals[0]=='pixel' : # is a PXL
+ nlayer = int(vals[7])
+ if nlayer>NMaxLayer :
+ NMaxLayer = nlayer
+ self.data[1][int(vals[1])][int(vals[3])] = int(vals[7])
+ elif vals[0]=='SCT' : # is an SCT
+ nlayer = int(vals[9])
+ if nlayer > NMaxLayer :
+ NMaxLayer = nlayer
+ self.data[0][int(vals[1])][int(vals[3])] = nlayer
+ self.NLogicalLayers = NMaxLayer+1
+ print self.data
+ print "Number of layers:", self.NLogicalLayers
+ return None
+
+class Pattern :
+ """This class define a pattern or a sector"""
+ def __init__(self,nplanes,pid=-1) :
+ """Create the pattern, passing the number of planes and its ID"""
+ # set number of planes
+ self.nplanes = nplanes
+ # set the Pattern-ID
+ self.pid = pid
+ # set the id of Super-Strips in this pattern, -1 means uninitialized
+ self.ssid = [-1]*nplanes
+ # set the PID of the onwer sector, valid only for patterns
+ self.sector = -1
+ self.coverage = -1
+ return None
+
+ def Clone(self) :
+ """Clone this pattern"""
+ newpatt = Pattern(self.nplanes,self.pid)
+ for i in xrange(self.nplanes) :
+ newpatt.ssid[i] = self.ssid[i]
+ newpatt.sector = self.sector
+ newpatt.coverage = self.coverage
+ return newpatt
+
+ def SetNPlanes(self,nplanes) :
+ """Set the number of plane and sizes the internal structures"""
+ self.nplanes = nplanes
+ self.ssid = [-1]*nplanes
+ return None
+
+ def ReadFromFile(self,fdesc) :
+ """Read the next line of a file as the description of a pattern"""
+ #print "Read from file"
+ line = fdesc.readline()
+ #print "line"
+ return self.ReadFromLine(line)
+
+ def ReadFromLine(self,line) :
+ vals = line.split()
+ if len(vals)!=self.nplanes+3 :
+ print "*** wrong number of arguments for a", self.nplanes, "pattern:"
+ print ">", line
+ else :
+ # set the values
+ if self.pid!=-1 :
+ if self.pid != int(vals[0]) :
+ print "*** mismatch reading Pattern", int(vals[0]), "in pattern", self.pid, "->", self.ssid
+ else :
+ self.pid = int(vals[0])
+ for ip in xrange(self.nplanes) :
+ self.ssid[ip] = int(vals[ip+1])
+ self.sector = int(vals[self.nplanes+1])
+ self.coverage = int(vals[self.nplanes+2])
+ return self.pid
+
+ def getXmin(self,plane,isPixel,moduleID,ssmap) :
+ """Return the minimum coordinates for a SS"""
+ if isPixel :
+ phioff = 200
+ else :
+ phioff = 100
+ phimod = moduleID/1000
+ if moduleID%100 < 20 : # is barrel
+ return self.ssid[plane]/phioff*ssmap.ss_data[0][isPixel][0]-(ssmap.ss_data[0][isPixel][1]-ssmap.ss_data[0][isPixel][1]%ssmap.ss_data[0][isPixel][0]+ssmap.ss_data[0][isPixel][0])*phimod
+
+ def PrintToFile(self,stream) :
+ """Print the Pattern content into a file"""
+ line = "ID "+str(self.pid)
+ line += " SSs "
+ for i in xrange(self.nplanes) :
+ line += " "+str(self.ssid[i])
+ line += " in "+str(self.sector)+" cov "+str(self.coverage)
+ line += "\n"
+ stream.write(line)
+ return None
+
+ def IsEqual(self,other) :
+ """Return True if a given pattern is equal to this. All the elements are compared, the ones with -1 are ignored"""
+ for i in xrange(self.nplanes) :
+ if other.ssid[i] == -1:
+ continue
+
+ if self.ssid[i]!=other.ssid[i] :
+ return False
+
+ if other.sector != -1 and other.sector != self.sector :
+ return False
+
+ if other.coverage != -1 and other.coverage != self.coverage :
+ return False
+ return True
+
+class PatternKDTree :
+ """This class represents a node, ora tree, using kd-tree convention"""
+ def __init__(self,pattern,depth) :
+ # set the object related to this node
+ self.pattern = pattern
+ # node depth
+ self.depth = depth
+ # select the dimension splitted by this level
+ self.split = self.depth % pattern.nplanes
+ self.left = None
+ self.right = None
+ return None
+
+ def AddNode(self,pattern) :
+ """Add a node into the KD-Tree"""
+ newnode = None
+ # test if is greater
+ if self.pattern.ssid[self.split] > pattern.ssid[self.split] :
+ if self.right == None :
+ # create a new right node
+ self.right = PatternKDTree(pattern,self.depth+1)
+ newnode = self.right
+ else :
+ # continue the search
+ newnode = self.right.AddNode(pattern)
+ else : # place on the left
+ if self.left == None :
+ # create a new left node
+ self.left = PatternKDTree(pattern,self.depth+1)
+ newnode = self.left
+ else :
+ # continue the search
+ newnode = self.left.AddNode(pattern)
+ return newnode
+
+ def FindNode(self,pattern) :
+ """Find the correspondent node, return None if doesn't exist. If pattern fields with -1 are used, to look for multiple matches, only the first is returned."""
+ # ntuple to accumulate the similare
+ res = []
+ # check for this node
+ if self.pattern.IsEqual(pattern) :
+ res.append(self)
+
+ # continue the search if greater or is a not partitioning plane
+ if self.pattern.ssid[self.split] > pattern.ssid[self.split] or pattern.ssid[self.split] == -1:
+ if self.right != None :
+ res += self.right.FindNode(pattern)
+ if self.pattern.ssid[self.split] <= pattern.ssid[self.split] or pattern.ssid[self.split] == -1:
+ if self.left != None :
+ res += self.left.FindNode(pattern)
+ return res
+
+class PatternBank :
+ def __init__(self,path,mode="r",nplanes=-1) :
+ self.mode = mode
+ self.stream = None
+ if path[-3:] == "bz2" :
+ print "INFO: Read bz2 compressed pattern bank",
+ self.stream = bz2.BZ2File(path,mode)
+ print "Done"
+ elif path[-2:] == "gz" :
+ print "INFO: Read gzip compressed pattern bank",
+ self.stream = bz2.GzipFile(path,mode)
+ print "Done"
+ else :
+ self.stream = open(path,mode)
+
+ if mode.find("r")>-1 :
+ # read the header of the nank
+ line = self.stream.readline()
+ vals = line.split()
+ # set the global attributes fro the bank
+ self.npatterns = int(vals[0])
+ self.nplanes = int(vals[1])
+ self.patterns = []
+ else :
+ self.npatterns = 0
+ self.nplanes = nplanes
+ self.patterns = []
+ return None
+
+ def LoadPatterns(self,maxpatt=-1,pattmask=None) :
+ """Load patterns from the given files. "maxpatt" argument, if >-1, limit the number of patterns to read, "pattmask" is pattern and pattern equal to it are loaded, to build this pattern mask read the Pattern.IsEqual documentation"""
+ # load the patterns
+ ntoread = maxpatt
+ if ntoread ==-1 :
+ ntoread = self.npatterns
+ fraction = ntoread/20
+ print "Load %d pattens" % ntoread
+ for i in xrange(ntoread) :
+ if i % fraction == 0 :
+ print i
+ newpatt = Pattern(self.nplanes,i)
+ newpatt.ReadFromFile(self.stream)
+ if pattmask == None :
+ self.patterns.append(newpatt)
+ elif newpatt.IsEqual(pattmask) :
+ self.patterns.append(newpatt)
+
+ #i = 0
+ # for line in self.stream :
+ # if i % fraction == 0:
+ # print i
+ # newpatt = Pattern(self.nplanes,i)
+ # newpatt.ReadFromLine(line)
+ # self.patterns.append(newpatt)
+ # i += 1
+ print "Done"
+ return None
+
+ def FindPatterns(self,pattern) :
+ """Search, using a linear algorithm, if exist an equal pattern. Because the -1 fields are interpreted as "any" multiple matches are possible, the method retuns a list"""
+ res = []
+ for patt in self.patterns :
+ if patt.IsEqual(pattern) :
+ res.append(patt)
+ return res
+
+ def BuildKDTree(self) :
+ """Build a KD-Tree representation of the patterns"""
+ kdtree = PatternKDTree(self.patterns[0],0)
+ for node in self.patterns[1:] :
+ kdtree.AddNode(node)
+ return kdtree
+
+
+class FTKHit :
+ """this class describe the content of a single hit reading the format of the FTK wrapper"""
+ def __init__(self,raw_elements) :
+ # global position of the hit
+ self.x = float(raw_elements[0])
+ self.y = float(raw_elements[1])
+ self.z = float(raw_elements[2])
+ # type of the detector: 1 pxl, 0 SCT
+ self.type = int(raw_elements[3])
+ # detector position: 0 bar
+ self.BarEcp = int(raw_elements[4])
+ # modul layer number, phi and eta position
+ self.layer = int(raw_elements[5])
+ self.phi_module = int(raw_elements[6])
+ self.eta_module = int(raw_elements[7])
+ # for SCT side, PXL phi position of the channel
+ self.side = int(raw_elements[8])
+ # SCT number of strip, PXL eta position
+ self.strip = int(raw_elements[9])
+ # PXL ToT, SCT number of strips
+ self.num_strips = int(raw_elements[10])
+ # event number of the associated track
+ self.event = int(raw_elements[11])
+ # barcode of the associated track
+ self.barcode = int(raw_elements[12])
+ # pt of the associated track
+ self.barcode_pt = float(raw_elements[13])
+ # fraction of the association
+ self.barcode_frac = float(raw_elements[14])
+
+ if self.type != 0 :
+ return None
+ layer_offset = 0 # 3 if you focus on the barrel and after don't use the plane map
+ # here elaborate SCT ID for barrel
+ if self.BarEcp == 0 :
+ if self.layer==0 and self.side == 1 :
+ self.layer = 0 + layer_offset
+ elif self.layer==0 and self.side == 0 :
+ self.layer = 1 + layer_offset
+ elif self.layer==1 and self.side == 0 :
+ self.layer = 2 + layer_offset
+ elif self.layer==1 and self.side == 1 :
+ self.layer = 3 + layer_offset
+ elif self.layer==2 and self.side == 1 :
+ self.layer = 4 + layer_offset
+ elif self.layer==2 and self.side == 0 :
+ self.layer = 5 + layer_offset
+ elif self.layer==3 and self.side == 0 :
+ self.layer = 6 + layer_offset
+ elif self.layer==3 and self.side == 1 :
+ self.layer = 7 + layer_offset
+ else : # endcap part, look FTKPMap.cxx for further details
+ outside = 0
+ inner_ring = 0;
+ if self.eta_module > 0 :
+ inner_ring = 1
+
+ if (self.eta_module == 0 or self.eta_module == 2) and self.side == 1 :
+ outside = 1
+
+ if self.eta_module == 1 and self.side == 0 :
+ outside = 1
+
+ # /* disk 8 flipped: special case */
+ if self.layer == 8 and self.side == 1 :
+ outside = 0
+ if self.layer == 8 and self.side == 0 :
+ outside = 1
+
+ # /* split the disks up by inner/outer, and by side */
+ self.layer = 4*self.layer + 2*inner_ring + outside;
+
+ # /* aaaaand fix eta index */
+ if inner_ring:
+ self.eta_module = self.eta_module - 1;
+
+
+ return None
+
+class FTKOffline :
+ """This class summarize the content of the offline tracks as stored in the wrapper files"""
+ def __init__(self,params) :
+ # perigee parameters
+ self.d0 = float(params[0])
+ self.z0 = float(params[1])
+ # direction
+ self.phi0 = float(params[2])
+ self.ctheta = float(params[3])
+ self.eta = -log(tan(atan2(1.0,self.ctheta)/2.))
+ self.qpt = float(params[4])
+ self.curv = 1./self.qpt/2000.0 #offline tracks are in MeV
+ # truth association
+ self.evtidx = int(params[5])
+ self.barcode = int(params[6])
+ self.barcode_frac = float(params[7])
+ return None
+
+class FTKTruth :
+ def __init__(self,params) :
+ """FTKTruth is described in the files produced by the wrapper using 8 values, here the value are converted in the ones used in FTK"""
+ # get the raw parameter
+ self.x0 = float(params[0])
+ self.y0 = float(params[1])
+ self.z0 = float(params[2])
+ self.charge = float(params[3])
+ self.px = float(params[4])
+ self.py = float(params[5])
+ self.pz = float(params[6])
+ self.pdgcode = int(params[7])
+ self.assoc = int(params[8])
+ self.barcode_frac = float(params[9])
+ self.evtindex = int(params[10])
+ self.barcode = int(params[11])
+ #print self.barcode
+ self.parentID = int(params[12])
+ self.isfiducial = int(params[13])
+
+ self.pt = sqrt(self.px**2+self.py**2)
+ self.ctheta = self.pz/self.pt
+ if self.charge >= 0 :
+ signcharge = 1.0
+ else :
+ signcharge = -1.0
+
+ # evaluate the derived parameters
+ x = self.x0-self.charge*self.py
+ y = self.y0+self.charge*self.px
+ self.curv = self.charge/sqrt(self.px**2+self.py**2)
+ try :
+ self.d0 = sqrt(x**2+y**2)*signcharge-1./self.curv
+ except ZeroDivisionError:
+ # print "Warning: 0 curvature"
+ self.d0 = 0
+ self.phi0 = atan2(-x*signcharge,y*signcharge)
+ self.curv /= 2.
+ thetaOver2 = (self.ctheta**2-1)/(2*self.ctheta)
+ try :
+ theta = atan2(self.pt,self.pz)
+ self.eta = -log(tan(theta/2.))
+ except :
+ self.eta = 0
+ return None
+
+ def Print(self) :
+ print "(curv,phi0,d0,ctheta,z0)=(%f,%f,%f,%f,%f)" % (self.curv, self.phi0, self.d0, self.ctheta, self.z0), "(assoc,barcode,evtID,parentID)=(%d,%d,%d,%d)" % (self.assoc,self.barcode,self.evtindex,self.parentID), "pdg=%d" % self.pdgcode
+ return None
+
+class FTKEventStreamer :
+ def __init__(self,outFile) :
+ # Class to handle event outputing
+ self.thisEvent = ""
+ self.outFile = outFile
+
+ def clear(self):
+ # Clear data for next event
+ self.thisEvent = ""
+
+ def addLine(self,line):
+ # Clear data for next event
+ self.thisEvent += line
+
+ def write(self, roads=None):
+ # output data for next event
+ self.outFile.write(self.thisEvent)
+ if roads:
+ self.writeRoads(roads)
+
+ def writeRoads(self,roads):
+
+ for region in roads:
+ if not region:
+ continue
+
+ for road in region:
+ if not road:
+ continue
+ self.outFile.write("D\t"+str(road[0])+"\t"+str(road[1])+"\t"+str(road[2])+"\t"+str(road[3])+"\n")
+
+
+class FTKEvent :
+ def __init__(self, outFile=None) :
+ # member to store event information
+ self.run = -1
+ self.event = -1;
+ self.raw_hits = []
+ self.truth_tracks = []
+ self.off_tracks = []
+ # flag to control how the events are parsed
+ self.ignoreHits = False
+ self.ignoreOffline = False
+ self.ignoreTruth = False
+
+ # flag to enable caching of input event
+ if outFile:
+ self.EventStreamer = FTKEventStreamer(outFile)
+ else:
+ self.EventStreamer = None
+
+ return None
+
+ def Reset(self) :
+ self.run = -1
+ self.event = -1;
+ self.raw_hits = []
+ self.truth_tracks = []
+ self.off_tracks = []
+ return None
+
+
+ def ReadFromFile(self,stream) :
+ """Read the event from an ascii encoded file"""
+ inEvent = False
+
+ if self.EventStreamer:
+ self.EventStreamer.clear()
+
+ for line in stream :
+
+ if self.EventStreamer:
+ self.EventStreamer.addLine(line)
+
+ #elements = line.split()
+ if line[0] == "R" :
+ self.run = int(line.split()[1])
+ elif line[0] == "F" :
+ #print self.event
+ self.event = int(line.split()[1])
+ inEvent = True
+ elif line[0] == "S" :
+ if not self.ignoreHits :
+ self.raw_hits.append(FTKHit(line.split()[1:]))
+ elif line[0] == "E" :
+ if not self.ignoreOffline :
+ self.off_tracks.append(FTKOffline(line.split()[1:]))
+ elif line[0] == "T" :
+ if not self.ignoreTruth :
+ self.truth_tracks.append(FTKTruth(line.split()[1:]))
+ elif line[0] == "L" :
+ break
+ return inEvent
+
+ def WriteToFile(self,roads=None) :
+ """Write event to an ascii encoded file"""
+ self.EventStreamer.write(roads)
+
+ def filterHitsBarcode(self,barcode) :
+ """This function fitlers the hits by barcode"""
+ newHitList = []
+ for ihit in self.raw_hits : # hits loop
+ if ihit.barcode == barcode :
+ newHitList.append(ihit)
+ #end hits loop
+ self.raw_hits = newHitList
+ return len(self.raw_hits)
+
+ def IsBarrel(self) :
+ """Return True if all the hits are in the barrel"""
+ isBarrel = True
+ for hit in self.raw_hits :
+ if hit.BarEcp != 0 :
+ isBarrel = False
+ break
+ return isBarrel
+
+ def GroupHits(self) :
+ """Return the number of planes with hits"""
+ plane_list = {}
+ for hit in self.raw_hits :
+ if hit.layer in plane_list :
+ plane_list[hit.layer] += [hit]
+ else :
+ plane_list[hit.layer] = [hit]
+ return plane_list
+
+ def PrintTruthTracks(self) :
+ """Print the list of the truth tracks"""
+ for track in self.truth_tracks :
+ track.Print()
+
+class FTKFileChain :
+ def __init__(self,filelist,outFile=None) :
+ self.filelist = filelist
+ self.nfiles = len(filelist)
+ self.currentID = -1
+ self.event = -1
+ self.localevent = -1
+ self.doWriteOutput = False
+ self.outFile = outFile
+ self.FTKEvent = FTKEvent(self.outFile)
+
+ return None
+
+ def open_helper(self,path) :
+ print "Open", path
+ if path[-3:] == "bz2" :
+ print "INFO: Read bz2 compressed data file",
+ self.stream = bz2.BZ2File(path,"r")
+ print "Done"
+ elif path[-2:] == "gz" :
+ print "INFO: Read gzip compressed data file",
+ self.stream = bz2.GzipFile(path,"r")
+ print "Done"
+ else :
+ self.stream = open(path,"r")
+ return None
+
+ def nextevent(self) :
+ if self.currentID == -1 :
+ self.currentID += 1
+ print "Opening ", self.filelist[0]
+ self.open_helper(self.filelist[0])
+ self.FTKEvent.Reset()
+ while not self.FTKEvent.ReadFromFile(self.stream) :
+ self.currentID += 1
+ if self.currentID == self.nfiles :
+ print "All wrapper events read", self.filelist
+ self.FTKEvent.Reset()
+ return False
+ self.stream.close()
+ self.open_helper(self.filelist[self.currentID])
+ self.localevent = -1
+ # increment the event counter
+ self.event += 1
+ self.localevent += 1
+ return True
+
+class Constant :
+ """This class defines constant"""
+ def __init__(self,nplanes,pid=-1) :
+ """Create the pattern, passing the number of planes and its ID"""
+ # set number of planes
+ self.nplanes = nplanes
+ if int(nplanes) == 11:
+ self.ncoords = 14
+ elif int(nplanes) == 12:
+ self.ncoords = 16
+ # set the Constant-ID
+ self.pid = pid
+ # set the initial values in the constants
+ self.Vc = [0]*self.ncoords
+ self.Vd = [0]*self.ncoords
+ self.Vf = [0]*self.ncoords
+ self.Vz0 = [0]*self.ncoords
+ self.Vo = [0]*self.ncoords
+ self.kaverages = [0]*(self.ncoords-5)
+ self.kernel = [0]*(self.ncoords-5)*self.ncoords
+ self.Cc = 0
+ self.Cd = 0
+ self.Cf = 0
+ self.Cz0 = 0
+ self.Co = 0
+ return None
+
+ def SetNPlanes(self,nplanes) :
+ """Set the number of plane and sizes the internal structures"""
+ self.nplanes = nplanes
+ self.ssid = [-1]*nplanes
+ return None
+
+ def ReadFromFile(self,fdesc) :
+ while self.Co==0:
+ line = fdesc.readline()
+ if line.find("sector")!=-1 :
+ value = fdesc.readline()
+ self.pid = value.split()[0]
+ if line.find("Vc")!=-1 :
+ for i in xrange(self.ncoords):
+ value = fdesc.readline()
+ self.Vc[i] = value.split()[0]
+ if line.find("Vd")!=-1 :
+ for i in xrange(self.ncoords):
+ value = fdesc.readline()
+ self.Vd[i] = value.split()[0]
+ if line.find("Vf")!=-1 :
+ for i in xrange(self.ncoords):
+ value = fdesc.readline()
+ self.Vf[i] = value.split()[0]
+ if line.find("Vz0")!=-1 :
+ for i in xrange(self.ncoords):
+ value = fdesc.readline()
+ self.Vz0[i] = value.split()[0]
+ if line.find("Vo")!=-1 :
+ for i in xrange(self.ncoords):
+ value = fdesc.readline()
+ self.Vo[i] = value.split()[0]
+ if line.find("kaverages")!=-1 :
+ for i in xrange(self.ncoords-5):
+ value = fdesc.readline()
+ self.kaverages[i] = value.split()[0]
+ if line.find("kernel")!=-1 :
+ for i in xrange((self.ncoords-5)*self.ncoords):
+ value = fdesc.readline()
+ self.kernel[i] = value.split()[0]
+ if line.find("Cc")!=-1 :
+ value = fdesc.readline()
+ self.Cc = value.split()[0]
+ if line.find("Cd")!=-1 :
+ value = fdesc.readline()
+ self.Cd = value.split()[0]
+ if line.find("Cf")!=-1 :
+ value = fdesc.readline()
+ self.Cf = value.split()[0]
+ if line.find("Cz0")!=-1 :
+ value = fdesc.readline()
+ self.Cz0 = value.split()[0]
+ if line.find("Co")!=-1 :
+ value = fdesc.readline()
+ self.Co = value.split()[0]
+ return self.pid
+
+ def PrintToFile(self,stream,newpid='') :
+ stream.flush()
+ """Print the constant content into a file"""
+ stream.write("sectors\n")
+ # newpid is for when writing into 7_11 connections so that the 7-11L synchronziation is done
+ if newpid!='':
+ stream.write(str(newpid)+"\n")
+ else:
+ stream.write(str(self.pid)+"\n")
+ stream.write(" Vc\n")
+ for i in self.Vc:
+ stream.write(str(i)+"\n")
+ stream.write(" Vd\n")
+ for i in self.Vd:
+ stream.write(str(i)+"\n")
+ stream.write(" Vf\n")
+ for i in self.Vf:
+ stream.write(str(i)+"\n")
+ stream.write(" Vz0\n")
+ for i in self.Vz0:
+ stream.write(str(i)+"\n")
+ stream.write(" Vo\n")
+ for i in self.Vo:
+ stream.write(str(i)+"\n")
+ stream.write(" kaverages\n")
+ for i in self.kaverages:
+ stream.write(str(i)+"\n")
+ stream.write(" kernel\n")
+ for i in self.kernel:
+ stream.write(str(i)+"\n")
+ stream.write(" Cc\n")
+ stream.write(str(self.Cc)+"\n")
+ stream.write(" Cd\n")
+ stream.write(str(self.Cd)+"\n")
+ stream.write(" Cf\n")
+ stream.write(str(self.Cf)+"\n")
+ stream.write(" Cz0\n")
+ stream.write(str(self.Cz0)+"\n")
+ stream.write(" Co\n")
+ stream.write(str(self.Co)+"\n")
+
+class ConstantBank :
+ def __init__(self,path,mode="r",nplanes=-1) :
+ self.mode = mode
+ self.stream = None
+ self.path = path
+ if path[-3:] == "bz2" :
+ print "INFO: Read bz2 compressed pattern bank",
+ self.stream = bz2.BZ2File(path,mode)
+ print "Done"
+ elif path[-2:] == "gz" :
+ print "INFO: Read gzip compressed pattern bank",
+ self.stream = bz2.GzipFile(path,mode)
+ print "Done"
+ else :
+ self.stream = open(path,mode)
+
+ if mode.find("r")>-1 :
+ # read the header of the bank
+ line = ""
+ while line.find("NPLANES")==-1:
+ line = self.stream.readline()
+ print " 1",line
+ line = self.stream.readline()
+ print "2",line
+ self.nplanes = line.split()[0]
+ while line.find("NSECTORS")==-1:
+ line = self.stream.readline()
+ print "3",line
+ line = self.stream.readline()
+ print "4",line
+ self.nconstants = int(line.split()[0])
+ while line.find("NDIM")==-1:
+ line = self.stream.readline()
+ line = self.stream.readline()
+ self.ndim = line.split()[0]
+ self.constants=[]
+ else :
+ self.nplanes = nplanes
+ self.nconstants = 0
+ self.ndims = 0
+ self.patterns = []
+ return None
+
+ def LoadConstants(self,maxgcon=-1,gconmask=None) :
+ """Load constants from the given files. "maxgcon" argument, if >-1, limit the number of constants to read, "gconmask" is constant and constant equal to it are loaded, to build this constant mask read the Constant.IsEqual documentation"""
+ # load the constants
+ ntoread = maxgcon
+ if ntoread ==-1 :
+ ntoread = self.nconstants
+ fraction = ntoread/20
+ print "Load %d constants" % ntoread
+ for i in xrange(ntoread) :
+ if i % fraction == 0 :
+ print i
+ newgcon = Constant(self.nplanes,i)
+ newgcon.ReadFromFile(self.stream)
+ self.constants.append(newgcon)
+ if str(newgcon.pid) != str( i ):
+ print 'Check do they match: ? ',newgcon.pid, i
+
+ #i = 0
+ # for line in self.stream :
+ # if i % fraction == 0:
+ # print i
+ # newpatt = Pattern(self.nplanes,i)
+ # newpatt.ReadFromLine(line)
+ # self.patterns.append(newpatt)
+ # i += 1
+ print "Done"
+ return None
+
+ def FindConstant(self,pid) :
+ """Search, using a linear algorithm, if exist an equal pattern. Because the -1 fields are interpreted as "any" multiple matches are possible, the method retuns a list"""
+ res = []
+ for gcon in self.constants :
+ if str(gcon.pid) == str(pid) :
+ return gcon
+ print 'NOT found!! ??? ? !', pid,self.path,self.constants[int(pid)].pid
+
+
+ # if not found
+ return -1
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/prep_banks_for_connection_prod.sh b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/prep_banks_for_connection_prod.sh
new file mode 100644
index 00000000000..44384bea07c
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/prep_banks_for_connection_prod.sh
@@ -0,0 +1,138 @@
+#!/bin/bash
+
+DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
+source $DIR/utils.sh
+
+usage() {
+ echo "Usage -"
+ echo ""
+ echo " $0 [DATASET_FIRSTSTAGE] [DATASET_SECONDSTAGE]"
+ echo ""
+ echo ""
+ echo ""
+ echo " for more information consult : https://twiki.cern.ch/twiki/bin/viewauth/Atlas/FTKSimShortTutorial#Generating_connection_files"
+ exit
+}
+
+echo
+e_header "Prepping first stage banks for second stage bank generation"
+echo
+echo
+
+e_underline "Checking arguments ... "
+if [ -z $1 ]; then
+ e_error "Must provide a path to Dataset containing first stage banks"
+ usage
+else
+ DSPATH_1=$1;
+ e_success "Recognized first stage bank datapath as "$DSPATH_1
+fi
+
+if [ -z $2 ]; then
+ e_error "Must provide a path to Dataset containing second stage banks"
+ usage
+else
+ DSPATH_2=$2;
+ e_success "Recognized second stage bank datapath as "$DSPATH_2
+fi
+
+shift; shift;
+
+echo
+e_underline "Checking $DSPATH_1 for first stage constants"
+
+FOUND=0
+for FILE in $(ls $DSPATH_1); do
+ TMP_STR=$(echo $FILE | grep "sectors_raw_8L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ e_success "Recognized a file that looks like a 8L sector. Assume the dataset is correct and proceed"
+ e_note "file recognized : $FILE"
+ FOUND=1
+ break
+ fi
+done
+
+if [ $FOUND -eq 0 ]; then
+ e_error "Could not find 8L sector matching a string 'sectors_raw_8L_reg' in the dataset $DSPATH_1"
+ exit
+fi
+
+echo
+e_underline "Checking $DSPATH_2 for second stage constants"
+
+FOUND=0
+for FILE in $(ls $DSPATH_2); do
+ TMP_STR=$(echo $FILE | grep "sectors_raw_12L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ e_success "Recognized a file that looks like a 12L sector. Assume the dataset is correct and proceed"
+ e_note "file recognized : $FILE"
+ FOUND=1
+ break
+ fi
+done
+
+if [ $FOUND -eq 0 ]; then
+ e_error "Could not find 8L sector matching a string 'sectors_raw_8L_reg' in the dataset $DSPATH_2"
+ exit
+fi
+
+echo
+e_underline "Creating directory"
+
+e_arrow "create patt/"
+mkdir -p patt
+e_arrow "create gcon/"
+mkdir -p gcon
+
+echo
+e_underline "Linking files ..."
+
+extract_nicename() {
+ TMP_STR=$1
+ PATTERN=$2
+ echo ${TMP_STR##*$PATTERN}
+ #$(expr match "$TMP_STR" "$PATTERN")
+ #for i in $(seq 1 5); do
+ # INDEX=$(expr index $TMP_STR ".")
+ # TMP_STR=${TMP_STR:$INDEX}
+ #done
+ #echo $TMP_STR
+}
+
+for FILE in $(ls $DSPATH_1); do
+ TMP_STR=$(echo $FILE | grep "sectors_raw_8L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ cd patt/
+ NICENAME=$(extract_nicename $TMP_STR sectors)
+ ln -sfv ../$DSPATH_1/$FILE sectors$NICENAME
+ cd ../
+ fi
+ TMP_STR=$(echo $FILE | grep "corrgen_raw_8L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ cd gcon/
+ NICENAME=$(extract_nicename $TMP_STR corrgen)
+ ln -sfv ../$DSPATH_1/$FILE corrgen$NICENAME
+ cd ../
+ fi
+done
+
+
+for FILE in $(ls $DSPATH_2); do
+ TMP_STR=$(echo $FILE | grep "sectors_raw_12L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ cd patt/
+ NICENAME=$(extract_nicename $TMP_STR sectors)
+ ln -sfv ../$DSPATH_2/$FILE sectors$NICENAME
+ cd ../
+ fi
+ TMP_STR=$(echo $FILE | grep "corrgen_raw_12L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ cd gcon/
+ NICENAME=$(extract_nicename $TMP_STR corrgen)
+ ln -sfv ../$DSPATH_2/$FILE corrgen$NICENAME
+ cd ../
+ fi
+done
+
+echo
+e_success "DONE"
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/prep_banks_for_simulation.sh b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/prep_banks_for_simulation.sh
new file mode 100644
index 00000000000..1be929f2590
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/prep_banks_for_simulation.sh
@@ -0,0 +1,138 @@
+#!/bin/bash
+
+DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
+source $DIR/utils.sh
+
+usage() {
+ echo "Usage -"
+ echo ""
+ echo " $0 [DATASET_FIRSTSTAGE] [DATASET_SECONDSTAGE]"
+ echo ""
+ echo ""
+ echo ""
+ echo " for more information consult : https://twiki.cern.ch/twiki/bin/viewauth/Atlas/FTKSimShortTutorial#Generating_connection_files"
+ exit
+}
+
+echo
+e_header "Prepping first stage banks for second stage bank generation"
+echo
+echo
+
+e_underline "Checking arguments ... "
+if [ -z $1 ]; then
+ e_error "Must provide a path to Dataset containing first stage banks"
+ usage
+else
+ DSPATH_1=$1;
+ e_success "Recognized first stage bank datapath as "$DSPATH_1
+fi
+
+if [ -z $2 ]; then
+ e_error "Must provide a path to Dataset containing second stage banks"
+ usage
+else
+ DSPATH_2=$2;
+ e_success "Recognized second stage bank datapath as "$DSPATH_2
+fi
+
+shift; shift;
+
+echo
+e_underline "Checking $DSPATH_1 for first stage constants"
+
+FOUND=0
+for FILE in $(ls $DSPATH_1); do
+ TMP_STR=$(echo $FILE | grep "corrgen_raw_8L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ e_success "Recognized a file that looks like a 8L sector. Assume the dataset is correct and proceed"
+ e_note "file recognized : $FILE"
+ FOUND=1
+ break
+ fi
+done
+
+if [ $FOUND -eq 0 ]; then
+ e_error "Could not find 8L sector matching a string 'corrgen_raw_8L_reg' in the dataset $DSPATH_1"
+ exit
+fi
+
+echo
+e_underline "Checking $DSPATH_2 for second stage constants"
+
+FOUND=0
+for FILE in $(ls $DSPATH_2); do
+ TMP_STR=$(echo $FILE | grep "corrgen_raw_11L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ e_success "Recognized a file that looks like a 12L sector. Assume the dataset is correct and proceed"
+ e_note "file recognized : $FILE"
+ FOUND=1
+ break
+ fi
+done
+
+if [ $FOUND -eq 0 ]; then
+ e_error "Could not find 8L sector matching a string 'corrgen_raw_11L_reg' in the dataset $DSPATH_2"
+ exit
+fi
+
+echo
+e_underline "Creating directory"
+
+e_arrow "create patt/"
+mkdir -p patt
+e_arrow "create gcon/"
+mkdir -p gcon
+
+echo
+e_underline "Linking files ..."
+
+extract_nicename() {
+ TMP_STR=$1
+ PATTERN=$2
+ echo ${TMP_STR##*$PATTERN}
+ #$(expr match "$TMP_STR" "$PATTERN")
+ #for i in $(seq 1 5); do
+ # INDEX=$(expr index $TMP_STR ".")
+ # TMP_STR=${TMP_STR:$INDEX}
+ #done
+ #echo $TMP_STR
+}
+
+for FILE in $(ls $DSPATH_1); do
+ TMP_STR=$(echo $FILE | grep "sectors_raw_8L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ cd patt/
+ NICENAME=$(extract_nicename $TMP_STR sectors)
+ ln -sfv ../$DSPATH_1/$FILE sectors$NICENAME
+ cd ../
+ fi
+ TMP_STR=$(echo $FILE | grep "corrgen_raw_8L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ cd gcon/
+ NICENAME=$(extract_nicename $TMP_STR corrgen)
+ ln -sfv ../$DSPATH_1/$FILE corrgen$NICENAME
+ cd ../
+ fi
+done
+
+
+for FILE in $(ls $DSPATH_2); do
+ TMP_STR=$(echo $FILE | grep "sectors_raw_8L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ cd patt/
+ NICENAME=$(extract_nicename $TMP_STR sectors)
+ ln -sfv ../$DSPATH_2/$FILE sectors$NICENAME
+ cd ../
+ fi
+ TMP_STR=$(echo $FILE | grep "corrgen_raw_11L_reg")
+ if [ -n "${TMP_STR}" ]; then
+ cd gcon/
+ NICENAME=$(extract_nicename $TMP_STR corrgen)
+ ln -sfv ../$DSPATH_2/$FILE corrgen$NICENAME
+ cd ../
+ fi
+done
+
+echo
+e_success "DONE"
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/process_conn.sh b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/process_conn.sh
new file mode 100644
index 00000000000..2f40b3e9d3d
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/process_conn.sh
@@ -0,0 +1,86 @@
+#!/bin/bash
+
+##############################################################################
+#
+#
+# Process a single connection file for single region
+#
+#
+##############################################################################
+
+EOSCOMMAND="/afs/cern.ch/project/eos/installation/0.2.31/bin/eos.select"
+DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
+
+# Help
+usage()
+{
+ echo "ERROR - Usage:"
+ echo
+ echo "put both 8L and 12L, .gcon.bz2 and .patt.bz2 files in the same directory. then..."
+ echo " sh $(basename $0) OPTIONSTRINGS ..."
+ echo
+ echo "Options with arguments:"
+ echo " -h Help (Display this message)"
+ echo " -d bankdir (e.g. -d /path/to/bank/dir/)"
+ echo " -r Region (e.g. -r 16)"
+ echo ""
+ echo " e.g."
+ echo " sh generate_connection/make_conn/process_conn.sh -d ./sector_const -r 0"
+ echo ""
+ echo " for more information consult : https://twiki.cern.ch/twiki/bin/viewauth/Atlas/FTKSimShortTutorial#Generating_connection_files"
+ echo
+ exit
+}
+
+# Command-line opts
+while getopts ":d:r:h" OPTION; do
+ case $OPTION in
+ r) REGION=${OPTARG};;
+ d) BANKDIR=${OPTARG};;
+ h) usage;;
+ :) usage;;
+ esac
+done
+
+if [ -z ${REGION} ]; then usage; fi
+if [ -z ${BANKDIR} ]; then usage; fi
+
+# Verbose
+date
+echo "================================================"
+echo "$(basename $0) $*"
+echo "$(basename $0) $*" >> $DIR/.$(basename $0).history
+echo "------------------------------------------------"
+echo "REGION : ${REGION}"
+echo "BANKDIR : ${BANKDIR}"
+echo "================================================"
+
+#
+#
+# function
+#
+#
+
+# check if it's a number
+function is_number() {
+ re='^[0-9]+$'
+ if [[ $1 =~ $re ]]; then echo 1; else echo 0; fi
+}
+
+#cd $BANKDIR/patt
+cd $BANKDIR
+mkdir -p make_connection_log/
+LOG="make_connection_log/region_${REGION}.log"
+python $DIR/find_extrapolation_relations_v2.py sectors_raw_8L_reg${REGION}.patt.bz2 1 &> $LOG
+IS_SUCCESS=$(tail $LOG | grep "sucess")
+echo $IS_SUCCESS
+echo ""
+echo ""
+if [ -n "$IS_SUCCESS" ]; then
+ echo "The run was sucessful. The logfile is outputted : " $DIR/$LOG
+else
+ echo "Something went wrong in the process check the log file: " $DIR/$LOG
+fi
+
+
+#eof
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/tar_extrapolated_gcon.sh b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/tar_extrapolated_gcon.sh
new file mode 100644
index 00000000000..e22af79f07e
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/tar_extrapolated_gcon.sh
@@ -0,0 +1,53 @@
+#!/bin/bash
+
+DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
+source $DIR/utils.sh
+
+e_header "tarring newly generated gcon files"
+
+echo
+
+e_underline "checking arguments ..."
+
+if [ -z $1 ]; then
+ e_error "you must provide the path to the directory containing newly generated .gcon files"
+ exit
+else
+ DIRPATH=$1; shift;
+ e_success "argument recognized : DIRPATH="$DIRPATH
+fi
+
+FOUND=0
+for FILE in $(ls $DIRPATH); do
+ TMP_STR=$(echo $FILE | grep ".gcon" | grep -v "bz2")
+ if [ -n "${TMP_STR}" ]; then
+ e_success "Recognized a file that looks like a newly generated gcon file. Assume the dataset is correct and proceed"
+ e_note "file recognized : $FILE"
+ FOUND=1
+ break
+ fi
+done
+
+if [ $FOUND -eq 0 ]; then
+ e_error "Could not find file that match 'gcon' in the directory $DIRPATH"
+ exit
+fi
+
+
+e_arrow "Linking gcon files"
+for FILE in $(ls $DIRPATH); do
+ TMP_STR=$(echo $FILE | grep "gcon")
+ if [ -n "${TMP_STR}" ]; then
+ CHECK_BZIPPED=$(echo ${TMP_STR} | grep "bz2")
+ if [ -z ${CHECK_BZIPPED} ]; then
+ e_arrow "bzipping" $DIRPATH/$FILE
+ bzip2 $DIRPATH/$FILE
+ FILE=$FILE.bz2
+ fi
+ NEWFILENAME=${FILE//812L/11L}
+ cd $DIRPATH/../gcon/
+ ln -sfv ../patt/$FILE $NEWFILENAME
+ cd ..
+ fi
+done
+
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/utils.sh b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/utils.sh
new file mode 100644
index 00000000000..1d13ba88de0
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/generate_connection/make_conn/utils.sh
@@ -0,0 +1,153 @@
+#!/bin/bash
+
+#
+# Set Colors
+#
+
+bold=$(tput bold)
+underline=$(tput sgr 0 1)
+reset=$(tput sgr0)
+
+purple=$(tput setaf 171)
+red=$(tput setaf 1)
+green=$(tput setaf 76)
+tan=$(tput setaf 3)
+blue=$(tput setaf 38)
+
+#
+# Headers and Logging
+#
+
+e_header() { printf "\n${bold}${purple}========== %s ==========${reset}\n" "$@"
+}
+e_arrow() { printf "➜ $@\n"
+}
+e_success() { printf "${green}✔ %s${reset}\n" "$@"
+}
+e_error() { printf "${red}✖ %s${reset}\n" "$@"
+}
+e_warning() { printf "${tan}➜ %s${reset}\n" "$@"
+}
+e_underline() { printf "${underline}${bold}%s${reset}\n" "$@"
+}
+e_bold() { printf "${bold}%s${reset}\n" "$@"
+}
+e_note() { printf "${underline}${bold}${blue}Note:${reset} ${blue}%s${reset}\n" "$@"
+}
+
+#
+# USAGE FOR SEEKING CONFIRMATION
+# seek_confirmation "Ask a question"
+# Credt: https://github.com/kevva/dotfiles
+#
+# if is_confirmed; then
+# some action
+# else
+# some other action
+# fi
+#
+
+seek_confirmation() {
+ printf "\n${bold}$@${reset}"
+ read -p " (y/n) " -n 1
+ printf "\n"
+}
+
+# underlined
+seek_confirmation_head() {
+ printf "\n${underline}${bold}$@${reset}"
+ read -p "${underline}${bold} (y/n)${reset} " -n 1
+ printf "\n"
+}
+
+# Test whether the result of an 'ask' is a confirmation
+is_confirmed() {
+if [[ "$REPLY" =~ ^[Yy]$ ]]; then
+ return 0
+fi
+return 1
+}
+
+#
+# Test whether a command exists
+# $1 = cmd to test
+# Usage:
+# if type_exists 'git'; then
+# some action
+# else
+# some other action
+# fi
+#
+
+type_exists() {
+if [ $(type -P $1) ]; then
+ return 0
+fi
+return 1
+}
+
+#
+# Test which OS the user runs
+# $1 = OS to test
+# Usage: if is_os 'darwin'; then
+#
+
+is_os() {
+if [[ "${OSTYPE}" == $1* ]]; then
+ return 0
+fi
+return 1
+}
+
+#
+# Pushover Notifications
+# Usage: pushover "Title Goes Here" "Message Goes Here"
+# Credit: http://ryonsherman.blogspot.com/2012/10/shell-script-to-send-pushover.html
+#
+
+pushover () {
+ PUSHOVERURL="https://api.pushover.net/1/messages.json"
+ API_KEY="your-api-here"
+ USER_KEY="your-user-key-here"
+ DEVICE=""
+
+ TITLE="${1}"
+ MESSAGE="${2}"
+
+ curl \
+ -F "token=${API_KEY}" \
+ -F "user=${USER_KEY}" \
+ -F "device=${DEVICE}" \
+ -F "title=${TITLE}" \
+ -F "message=${MESSAGE}" \
+ "${PUSHOVERURL}" > /dev/null 2>&1
+}
+
+##
+## Given a list of desired items and installed items, return a list
+## of uninstalled items. Arrays in bash are insane (not in a good way).
+## Credit: https://github.com/cowboy/dotfiles
+##
+#
+#function to_install() {
+# local debug desired installed i desired_s installed_s remain
+# if [[ "$1" == 1 ]]; then debug=1; shift; fi
+# # Convert args to arrays, handling both space- and newline-separated lists.
+# read -ra desired < <(echo "$1" | tr '\n' ' ')
+# read -ra installed < <(echo "$2" | tr '\n' ' ')
+# # Sort desired and installed arrays.
+# unset i; while read -r; do desired_s[i++]=$REPLY; done < <(
+# printf "%s\n" "${desired[@]}" | sort
+# )
+# unset i; while read -r; do installed_s[i++]=$REPLY; done < <(
+# printf "%s\n" "${installed[@]}" | sort
+# )
+# # Get the difference. comm is awesome.
+# unset i; while read -r; do remain[i++]=$REPLY; done < <(
+# comm -13 <(printf "%s\n" "${installed_s[@]}") <(printf "%s\n" "${desired_s[@]}")
+# )
+# [[ "$debug" ]] && for v in desired desired_s installed installed_s remain; do
+# echo "$v ($(eval echo "\${#$v[*]}")) $(eval echo "\${$v[*]}")"
+# done
+# echo "${remain[@]}"
+#}
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_32TModB_HWMode2_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_32TModB_HWMode2_joboptions.py
new file mode 100644
index 00000000000..9fcdbb0a32e
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_32TModB_HWMode2_joboptions.py
@@ -0,0 +1,109 @@
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKSim.TrigFTKSimConf import *
+
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks=True
+ToolSvc += FTKSGHit
+
+
+#FTKSGHit.OutputLevel=DEBUG
+# print "Add FTKDetector tool"
+# FTKDet = FTKDetectorTool()
+# FTKDet.doBadModuleMap = False # True to produce or False to read an existing one
+# FTKDet.useBadModuleMap = False # may disable the use of dead modules mapping
+# #FTKDet.BadSSMapPath = "badSSmap.bmap"
+# #FTKDet.FTK_BadModuleMapPath = "badModulemap_FTK.bmap"
+# #FTKDet.ATLAS_BadModuleMapPath = "badModulemap_ATLAS.bmap"
+# ToolSvc += FTKDet
+# #FTKDet.OutputLevel=DEBUG
+
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+#FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=DEBUG)
+FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=FATAL)
+#MC11 for 8L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8Lc.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+#MC11 for 11L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+from PyJobTransforms.trfUtils import findFile
+pmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12LiblHW.pmap')
+print "Using PMAP:", pmap_path
+rmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl32TmodB.tmap')
+print "Using RMAP:", rmap_path
+
+#MC11 for IBL
+FTKBankGen.pmap_path = pmap_path
+FTKBankGen.rmap_path = rmap_path
+FTKBankGen.IBLMode = 1
+
+#MC12 for IBL
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8LcIblEXPtoIBL.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.imap2"
+
+FTKBankGen.const_test_mode = False;
+#FTKBankGen.const_test_mode = True;
+#FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+#FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+
+FTKBankGen.Clustering = True;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+#FTKBankGen.SctClustering = False;
+FTKBankGen.PixelClusteringMode = 1;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 0.8;#GeV
+FTKBankGen.TRAIN_PDG = 13;#Traing samples particle ID
+#FTKBankGen.NEvent = event;#event number
+FTKBankGen.NBanks = 64;
+FTKBankGen.BarrelOnly = False;
+FTKBankGen.rawMode = 1;
+FTKBankGen.UseIdentifierHash = True;
+
+FTKBankGen.par_c_max=0.0007;
+FTKBankGen.par_c_min=-0.0007;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=1;
+FTKBankGen.par_phi_min=-1;
+FTKBankGen.par_phi_slices=100;
+
+FTKBankGen.par_d0_max=2.2;
+FTKBankGen.par_d0_min=-2.2;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=120;
+FTKBankGen.par_z0_min=-120;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=3;
+FTKBankGen.par_eta_min=-3;
+FTKBankGen.par_eta_slices=100;
+
+alg += FTKBankGen # 1 alg, named "MyNewPackage"
+
+#-----------------------------------------------------------------------------
+# save ROOT histograms and Tuple
+#-----------------------------------------------------------------------------
+#from AthenaPoolCnvSvc.WriteAthenaPool import AthenaPoolOutputStream
+#Stream1 = AthenaPoolOutputStream( "Stream1" )
+#Stream1.OutputFile = "SimplePoolFile_Complete.root"
+
+#from GaudiSvc.GaudiSvcConf import THistSvc
+#ServiceMgr += THistSvc()
+#ServiceMgr.THistSvc.Output = [ "MyNewPackage DATAFILE='testAug21.root' OPT='RECREATE'" ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_32TModB_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_32TModB_joboptions.py
new file mode 100644
index 00000000000..42144409982
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_32TModB_joboptions.py
@@ -0,0 +1,109 @@
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKSim.TrigFTKSimConf import *
+
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks=True
+ToolSvc += FTKSGHit
+
+
+#FTKSGHit.OutputLevel=DEBUG
+# print "Add FTKDetector tool"
+# FTKDet = FTKDetectorTool()
+# FTKDet.doBadModuleMap = False # True to produce or False to read an existing one
+# FTKDet.useBadModuleMap = False # may disable the use of dead modules mapping
+# #FTKDet.BadSSMapPath = "badSSmap.bmap"
+# #FTKDet.FTK_BadModuleMapPath = "badModulemap_FTK.bmap"
+# #FTKDet.ATLAS_BadModuleMapPath = "badModulemap_ATLAS.bmap"
+# ToolSvc += FTKDet
+# #FTKDet.OutputLevel=DEBUG
+
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+#FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=DEBUG)
+FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=FATAL)
+#MC11 for 8L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8Lc.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+#MC11 for 11L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+from PyJobTransforms.trfUtils import findFile
+pmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12LiblHW.pmap')
+print "Using PMAP:", pmap_path
+rmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl32TmodB.tmap')
+print "Using RMAP:", rmap_path
+
+#MC11 for IBL
+FTKBankGen.pmap_path = pmap_path
+FTKBankGen.rmap_path = rmap_path
+FTKBankGen.IBLMode = 1
+
+#MC12 for IBL
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8LcIblEXPtoIBL.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.imap2"
+
+FTKBankGen.const_test_mode = False;
+#FTKBankGen.const_test_mode = True;
+#FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+#FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+
+FTKBankGen.Clustering = True;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+#FTKBankGen.SctClustering = False;
+FTKBankGen.PixelClusteringMode = 1;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 0.8;#GeV
+FTKBankGen.TRAIN_PDG = 13;#Traing samples particle ID
+#FTKBankGen.NEvent = event;#event number
+FTKBankGen.NBanks = 32;
+FTKBankGen.BarrelOnly = False;
+FTKBankGen.rawMode = 1;
+FTKBankGen.UseIdentifierHash = False;
+
+FTKBankGen.par_c_max=0.0007;
+FTKBankGen.par_c_min=-0.0007;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=1;
+FTKBankGen.par_phi_min=-1;
+FTKBankGen.par_phi_slices=100;
+
+FTKBankGen.par_d0_max=2.2;
+FTKBankGen.par_d0_min=-2.2;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=120;
+FTKBankGen.par_z0_min=-120;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=3;
+FTKBankGen.par_eta_min=-3;
+FTKBankGen.par_eta_slices=100;
+
+alg += FTKBankGen # 1 alg, named "MyNewPackage"
+
+#-----------------------------------------------------------------------------
+# save ROOT histograms and Tuple
+#-----------------------------------------------------------------------------
+#from AthenaPoolCnvSvc.WriteAthenaPool import AthenaPoolOutputStream
+#Stream1 = AthenaPoolOutputStream( "Stream1" )
+#Stream1.OutputFile = "SimplePoolFile_Complete.root"
+
+#from GaudiSvc.GaudiSvcConf import THistSvc
+#ServiceMgr += THistSvc()
+#ServiceMgr.THistSvc.Output = [ "MyNewPackage DATAFILE='testAug21.root' OPT='RECREATE'" ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_64TModB_HWMode2_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_64TModB_HWMode2_joboptions.py
new file mode 100644
index 00000000000..74ce9e2aa56
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_64TModB_HWMode2_joboptions.py
@@ -0,0 +1,109 @@
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKSim.TrigFTKSimConf import *
+
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks=True
+ToolSvc += FTKSGHit
+
+
+#FTKSGHit.OutputLevel=DEBUG
+# print "Add FTKDetector tool"
+# FTKDet = FTKDetectorTool()
+# FTKDet.doBadModuleMap = False # True to produce or False to read an existing one
+# FTKDet.useBadModuleMap = False # may disable the use of dead modules mapping
+# #FTKDet.BadSSMapPath = "badSSmap.bmap"
+# #FTKDet.FTK_BadModuleMapPath = "badModulemap_FTK.bmap"
+# #FTKDet.ATLAS_BadModuleMapPath = "badModulemap_ATLAS.bmap"
+# ToolSvc += FTKDet
+# #FTKDet.OutputLevel=DEBUG
+
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+#FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=DEBUG)
+FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=FATAL)
+#MC11 for 8L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8Lc.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+#MC11 for 11L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+from PyJobTransforms.trfUtils import findFile
+pmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12LiblHW.pmap')
+print "Using PMAP:", pmap_path
+rmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl64TmodB.tmap')
+print "Using RMAP:", rmap_path
+
+#MC11 for IBL
+FTKBankGen.pmap_path = pmap_path
+FTKBankGen.rmap_path = rmap_path
+FTKBankGen.IBLMode = 1
+
+#MC12 for IBL
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8LcIblEXPtoIBL.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.imap2"
+
+FTKBankGen.const_test_mode = False;
+#FTKBankGen.const_test_mode = True;
+#FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+#FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+
+FTKBankGen.Clustering = True;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+#FTKBankGen.SctClustering = False;
+FTKBankGen.PixelClusteringMode = 1;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 0.8;#GeV
+FTKBankGen.TRAIN_PDG = 13;#Traing samples particle ID
+#FTKBankGen.NEvent = event;#event number
+FTKBankGen.NBanks = 64;
+FTKBankGen.BarrelOnly = False;
+FTKBankGen.rawMode = 1;
+FTKBankGen.UseIdentifierHash = True;
+
+FTKBankGen.par_c_max=0.0007;
+FTKBankGen.par_c_min=-0.0007;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=1;
+FTKBankGen.par_phi_min=-1;
+FTKBankGen.par_phi_slices=100;
+
+FTKBankGen.par_d0_max=2.2;
+FTKBankGen.par_d0_min=-2.2;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=120;
+FTKBankGen.par_z0_min=-120;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=3;
+FTKBankGen.par_eta_min=-3;
+FTKBankGen.par_eta_slices=100;
+
+alg += FTKBankGen # 1 alg, named "MyNewPackage"
+
+#-----------------------------------------------------------------------------
+# save ROOT histograms and Tuple
+#-----------------------------------------------------------------------------
+#from AthenaPoolCnvSvc.WriteAthenaPool import AthenaPoolOutputStream
+#Stream1 = AthenaPoolOutputStream( "Stream1" )
+#Stream1.OutputFile = "SimplePoolFile_Complete.root"
+
+#from GaudiSvc.GaudiSvcConf import THistSvc
+#ServiceMgr += THistSvc()
+#ServiceMgr.THistSvc.Output = [ "MyNewPackage DATAFILE='testAug21.root' OPT='RECREATE'" ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_64TModB_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_64TModB_joboptions.py
new file mode 100644
index 00000000000..3562b5009ab
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_64TModB_joboptions.py
@@ -0,0 +1,109 @@
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKSim.TrigFTKSimConf import *
+
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks=True
+ToolSvc += FTKSGHit
+
+
+#FTKSGHit.OutputLevel=DEBUG
+# print "Add FTKDetector tool"
+# FTKDet = FTKDetectorTool()
+# FTKDet.doBadModuleMap = False # True to produce or False to read an existing one
+# FTKDet.useBadModuleMap = False # may disable the use of dead modules mapping
+# #FTKDet.BadSSMapPath = "badSSmap.bmap"
+# #FTKDet.FTK_BadModuleMapPath = "badModulemap_FTK.bmap"
+# #FTKDet.ATLAS_BadModuleMapPath = "badModulemap_ATLAS.bmap"
+# ToolSvc += FTKDet
+# #FTKDet.OutputLevel=DEBUG
+
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+#FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=DEBUG)
+FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=FATAL)
+#MC11 for 8L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8Lc.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+#MC11 for 11L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+from PyJobTransforms.trfUtils import findFile
+pmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12LiblHW.pmap')
+print "Using PMAP:", pmap_path
+rmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl64TmodB.tmap')
+print "Using RMAP:", rmap_path
+
+#MC11 for IBL
+FTKBankGen.pmap_path = pmap_path
+FTKBankGen.rmap_path = rmap_path
+FTKBankGen.IBLMode = 1
+
+#MC12 for IBL
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8LcIblEXPtoIBL.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.imap2"
+
+FTKBankGen.const_test_mode = False;
+#FTKBankGen.const_test_mode = True;
+#FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+#FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+
+FTKBankGen.Clustering = True;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+#FTKBankGen.SctClustering = False;
+FTKBankGen.PixelClusteringMode = 1;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 0.8;#GeV
+FTKBankGen.TRAIN_PDG = 13;#Traing samples particle ID
+#FTKBankGen.NEvent = event;#event number
+FTKBankGen.NBanks = 64;
+FTKBankGen.BarrelOnly = False;
+FTKBankGen.rawMode = 1;
+FTKBankGen.UseIdentifierHash = False;
+
+FTKBankGen.par_c_max=0.0007;
+FTKBankGen.par_c_min=-0.0007;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=1;
+FTKBankGen.par_phi_min=-1;
+FTKBankGen.par_phi_slices=100;
+
+FTKBankGen.par_d0_max=2.2;
+FTKBankGen.par_d0_min=-2.2;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=120;
+FTKBankGen.par_z0_min=-120;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=3;
+FTKBankGen.par_eta_min=-3;
+FTKBankGen.par_eta_slices=100;
+
+alg += FTKBankGen # 1 alg, named "MyNewPackage"
+
+#-----------------------------------------------------------------------------
+# save ROOT histograms and Tuple
+#-----------------------------------------------------------------------------
+#from AthenaPoolCnvSvc.WriteAthenaPool import AthenaPoolOutputStream
+#Stream1 = AthenaPoolOutputStream( "Stream1" )
+#Stream1.OutputFile = "SimplePoolFile_Complete.root"
+
+#from GaudiSvc.GaudiSvcConf import THistSvc
+#ServiceMgr += THistSvc()
+#ServiceMgr.THistSvc.Output = [ "MyNewPackage DATAFILE='testAug21.root' OPT='RECREATE'" ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_HWMode2_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_HWMode2_joboptions.py
new file mode 100644
index 00000000000..a25e80e147a
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_HWMode2_joboptions.py
@@ -0,0 +1,98 @@
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKSim.TrigFTKSimConf import *
+
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks=True
+ToolSvc += FTKSGHit
+
+
+#FTKSGHit.OutputLevel=DEBUG
+# print "Add FTKDetector tool"
+# FTKDet = FTKDetectorTool()
+# FTKDet.doBadModuleMap = False # True to produce or False to read an existing one
+# FTKDet.useBadModuleMap = False # may disable the use of dead modules mapping
+# #FTKDet.BadSSMapPath = "badSSmap.bmap"
+# #FTKDet.FTK_BadModuleMapPath = "badModulemap_FTK.bmap"
+# #FTKDet.ATLAS_BadModuleMapPath = "badModulemap_ATLAS.bmap"
+# ToolSvc += FTKDet
+# #FTKDet.OutputLevel=DEBUG
+
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+#FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=DEBUG)
+FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=FATAL)
+#MC11 for 8L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8Lc.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+#MC11 for 11L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+from PyJobTransforms.trfUtils import findFile
+pmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12LiblHW.pmap')
+print "Using PMAP:", pmap_path
+rmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl.tmap')
+print "Using RMAP:", rmap_path
+
+#MC11 for IBL
+FTKBankGen.pmap_path = pmap_path
+FTKBankGen.rmap_path = rmap_path
+FTKBankGen.IBLMode = 1
+
+#MC12 for IBL
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8LcIblEXPtoIBL.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.imap2"
+
+FTKBankGen.const_test_mode = False;
+#FTKBankGen.const_test_mode = True;
+#FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+#FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+
+FTKBankGen.Clustering = False;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+#FTKBankGen.SctClustering = False;
+FTKBankGen.PixelClusteringMode = 1;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 0.8;#GeV
+FTKBankGen.TRAIN_PDG = 13;#Traing samples particle ID
+#FTKBankGen.NEvent = event;#event number
+FTKBankGen.NBanks = 64;
+FTKBankGen.BarrelOnly = False;
+FTKBankGen.rawMode = 1;
+FTKBankGen.UseIdentifierHash = True;
+
+FTKBankGen.par_c_max=0.0007;
+FTKBankGen.par_c_min=-0.0007;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=1;
+FTKBankGen.par_phi_min=-1;
+FTKBankGen.par_phi_slices=100;
+
+FTKBankGen.par_d0_max=2.2;
+FTKBankGen.par_d0_min=-2.2;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=120;
+FTKBankGen.par_z0_min=-120;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=3;
+FTKBankGen.par_eta_min=-3;
+FTKBankGen.par_eta_slices=100;
+
+alg += FTKBankGen # 1 alg, named "MyNewPackage"
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_Run2GEO_32TModB_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_Run2GEO_32TModB_joboptions.py
new file mode 100644
index 00000000000..7fa0e9ac42c
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_Run2GEO_32TModB_joboptions.py
@@ -0,0 +1,111 @@
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKSim.TrigFTKSimConf import *
+
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks=True
+ToolSvc += FTKSGHit
+
+
+#FTKSGHit.OutputLevel=DEBUG
+# print "Add FTKDetector tool"
+# FTKDet = FTKDetectorTool()
+# FTKDet.doBadModuleMap = False # True to produce or False to read an existing one
+# FTKDet.useBadModuleMap = False # may disable the use of dead modules mapping
+# #FTKDet.BadSSMapPath = "badSSmap.bmap"
+# #FTKDet.FTK_BadModuleMapPath = "badModulemap_FTK.bmap"
+# #FTKDet.ATLAS_BadModuleMapPath = "badModulemap_ATLAS.bmap"
+# ToolSvc += FTKDet
+# #FTKDet.OutputLevel=DEBUG
+
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+#FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=DEBUG)
+FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=FATAL)
+#MC11 for 8L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8Lc.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+#MC11 for 11L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+from PyJobTransforms.trfUtils import findFile
+pmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12LiblHW3D.pmap')
+print "Using PMAP:", pmap_path
+rmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl32TmodB_3D_t13.tmap')
+#rmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl64TmodB_3D_t13.tmap')
+#rmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl64TmodB_3D_t1.tmap')
+print "Using RMAP:", rmap_path
+
+#MC11 for IBL
+FTKBankGen.pmap_path = pmap_path
+FTKBankGen.rmap_path = rmap_path
+FTKBankGen.IBLMode = 2
+
+#MC12 for IBL
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8LcIblEXPtoIBL.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.imap2"
+
+FTKBankGen.const_test_mode = False;
+#FTKBankGen.const_test_mode = True;
+#FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+#FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+
+FTKBankGen.Clustering = True;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+#FTKBankGen.SctClustering = False;
+FTKBankGen.PixelClusteringMode = 1;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 0.8;#GeV
+FTKBankGen.TRAIN_PDG = 13;#Traing samples particle ID
+#FTKBankGen.NEvent = event;#event number
+FTKBankGen.NBanks = 32;
+FTKBankGen.BarrelOnly = False;
+FTKBankGen.rawMode = 1;
+FTKBankGen.UseIdentifierHash = True;
+
+FTKBankGen.par_c_max=0.0007;
+FTKBankGen.par_c_min=-0.0007;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=1;
+FTKBankGen.par_phi_min=-1;
+FTKBankGen.par_phi_slices=100;
+
+FTKBankGen.par_d0_max=2.2;
+FTKBankGen.par_d0_min=-2.2;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=120;
+FTKBankGen.par_z0_min=-120;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=3;
+FTKBankGen.par_eta_min=-3;
+FTKBankGen.par_eta_slices=100;
+
+alg += FTKBankGen # 1 alg, named "MyNewPackage"
+
+#-----------------------------------------------------------------------------
+# save ROOT histograms and Tuple
+#-----------------------------------------------------------------------------
+#from AthenaPoolCnvSvc.WriteAthenaPool import AthenaPoolOutputStream
+#Stream1 = AthenaPoolOutputStream( "Stream1" )
+#Stream1.OutputFile = "SimplePoolFile_Complete.root"
+
+#from GaudiSvc.GaudiSvcConf import THistSvc
+#ServiceMgr += THistSvc()
+#ServiceMgr.THistSvc.Output = [ "MyNewPackage DATAFILE='testAug21.root' OPT='RECREATE'" ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_joboptions.py
new file mode 100644
index 00000000000..fd35eacb5a7
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenIBL_joboptions.py
@@ -0,0 +1,50 @@
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from PyJobTransforms.trfUtils import findFile
+from TrigFTKSim.TrigFTKSimConf import *
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks=True
+ToolSvc += FTKSGHit
+
+FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=FATAL)
+FTKBankGen.const_test_mode = False;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+#FTKBankGen.PixelClusteringMode = 1;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 0.8; # GeV
+FTKBankGen.TRAIN_PDG = 13; # muon ID
+FTKBankGen.BarrelOnly = False;
+FTKBankGen.rawMode = 1;
+
+FTKBankGen.par_c_max=0.0007;
+FTKBankGen.par_c_min=-0.0007;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=1;
+FTKBankGen.par_phi_min=-1;
+FTKBankGen.par_phi_slices=100;
+
+FTKBankGen.par_d0_max=2.2;
+FTKBankGen.par_d0_min=-2.2;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=120;
+FTKBankGen.par_z0_min=-120;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=3;
+FTKBankGen.par_eta_min=-3;
+FTKBankGen.par_eta_slices=100;
+
+alg += FTKBankGen
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenITk_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenITk_joboptions.py
new file mode 100644
index 00000000000..6d48addfdae
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGenITk_joboptions.py
@@ -0,0 +1,67 @@
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from PyJobTransforms.trfUtils import findFile
+from TrigFTKSim.TrigFTKSimConf import *
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks = True
+FTKSGHit.OutputLevel = INFO # DEBUG
+FTKSGHit.DoOutFileRawHits = True
+ToolSvc += FTKSGHit
+
+FTKBankGen = FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=DEBUG)
+FTKBankGen.pmap_path = findFile( os.environ['DATAPATH'] , "ftk_configuration/map_files/raw_ITkExample.pmap" )
+FTKBankGen.rmap_path = findFile( os.environ['DATAPATH'] , "ftk_configuration/map_files/raw_ITkExample.tmap" )
+FTKBankGen.IBLMode = 0
+FTKBankGen.ITkMode = True
+
+FTKBankGen.const_test_mode = False;
+FTKBankGen.Clustering = False;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+FTKBankGen.PixelClusteringMode = 0;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 4.0; # GeV
+FTKBankGen.TRAIN_PDG = 13; # Traing samples particle ID
+#FTKBankGen.NEvent = event; # Event number
+FTKBankGen.NBanks = 96;
+FTKBankGen.BarrelOnly = True;
+FTKBankGen.rawMode = 1;
+FTKBankGen.UseIdentifierHash = False;
+
+FTKBankGen.par_c_max=0.000125;
+FTKBankGen.par_c_min=-0.000125;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=0.159155; # 0.5 / Pi
+FTKBankGen.par_phi_min=0.095493; # 0.3 / Pi
+FTKBankGen.par_phi_slices=10;
+
+FTKBankGen.par_d0_max=2.0;
+FTKBankGen.par_d0_min=-2.0;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=150;
+FTKBankGen.par_z0_min=-150;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=0.3;
+FTKBankGen.par_eta_min=0.1;
+FTKBankGen.par_eta_slices=10;
+
+alg += FTKBankGen # 1 alg, named "MyNewPackage"
+
+# For debugging FPE bugs
+#from RecExConfig.RecFlags import rec
+#rec.doFloatingPointException=True
+
+
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGen_joboptions.py b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGen_joboptions.py
new file mode 100644
index 00000000000..0888cb8fe6a
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/r2e_FTKBankGen_joboptions.py
@@ -0,0 +1,108 @@
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# FTK algorithm inclusions
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKSim.TrigFTKSimConf import *
+
+
+print "Add FTK_SGHitInput tool"
+FTKSGHit = FTK_SGHitInput()
+FTKSGHit.ReadTruthTracks=True
+ToolSvc += FTKSGHit
+
+
+#FTKSGHit.OutputLevel=DEBUG
+# print "Add FTKDetector tool"
+# FTKDet = FTKDetectorTool()
+# FTKDet.doBadModuleMap = False # True to produce or False to read an existing one
+# FTKDet.useBadModuleMap = False # may disable the use of dead modules mapping
+# #FTKDet.BadSSMapPath = "badSSmap.bmap"
+# #FTKDet.FTK_BadModuleMapPath = "badModulemap_FTK.bmap"
+# #FTKDet.ATLAS_BadModuleMapPath = "badModulemap_ATLAS.bmap"
+# ToolSvc += FTKDet
+# #FTKDet.OutputLevel=DEBUG
+
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+#FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=DEBUG)
+FTKBankGen= FTKBankGenAlgo("FTKBankGenAlgo", OutputLevel=FATAL)
+#MC11 for 8L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8Lc.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+#MC11 for 11L
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.tmap"
+
+from PyJobTransforms.trfUtils import findFile
+pmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl.pmap')
+print "Using PMAP:", pmap_path
+rmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12Libl.tmap')
+print "Using RMAP:", rmap_path
+
+#MC11 for IBL
+FTKBankGen.pmap_path = pmap_path
+FTKBankGen.rmap_path = rmap_path
+
+#MC12 for IBL
+#FTKBankGen.pmap_path = "../../../TrigFTKSim/config/map_file/raw_8LcIblEXPtoIBL.pmap"
+#FTKBankGen.rmap_path = "../../../TrigFTKSim/config/map_file/raw_11L.imap2"
+
+FTKBankGen.const_test_mode = False;
+#FTKBankGen.const_test_mode = True;
+#FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+#FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/my_const_11L"
+FTKBankGen.sector_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+FTKBankGen.gcon_dir_path = "/afs/cern.ch/work/t/tomoya/public/user.tompkins.tdaqtdr_base_8LcIbl123_20130805"
+
+FTKBankGen.Clustering = False;
+FTKBankGen.SaveClusterContent = False;
+FTKBankGen.DiagClustering = True;
+#FTKBankGen.SctClustering = False;
+FTKBankGen.PixelClusteringMode = 1;
+FTKBankGen.DuplicateGanged = True;
+FTKBankGen.GangedPatternRecognition = False;
+
+FTKBankGen.PT_THRESHOLD = 0.8;#GeV
+FTKBankGen.TRAIN_PDG = 13;#Traing samples particle ID
+#FTKBankGen.NEvent = event;#event number
+FTKBankGen.NBanks = 64;
+FTKBankGen.BarrelOnly = False;
+FTKBankGen.rawMode = 1;
+FTKBankGen.UseIdentifierHash = True;
+
+FTKBankGen.par_c_max=0.0007;
+FTKBankGen.par_c_min=-0.0007;
+FTKBankGen.par_c_slices=250;
+
+FTKBankGen.par_phi_max=1;
+FTKBankGen.par_phi_min=-1;
+FTKBankGen.par_phi_slices=100;
+
+FTKBankGen.par_d0_max=2.2;
+FTKBankGen.par_d0_min=-2.2;
+FTKBankGen.par_d0_slices=250;
+
+FTKBankGen.par_z0_max=120;
+FTKBankGen.par_z0_min=-120;
+FTKBankGen.par_z0_slices=100;
+
+FTKBankGen.par_eta_max=3;
+FTKBankGen.par_eta_min=-3;
+FTKBankGen.par_eta_slices=100;
+
+alg += FTKBankGen # 1 alg, named "MyNewPackage"
+
+#-----------------------------------------------------------------------------
+# save ROOT histograms and Tuple
+#-----------------------------------------------------------------------------
+#from AthenaPoolCnvSvc.WriteAthenaPool import AthenaPoolOutputStream
+#Stream1 = AthenaPoolOutputStream( "Stream1" )
+#Stream1.OutputFile = "SimplePoolFile_Complete.root"
+
+#from GaudiSvc.GaudiSvcConf import THistSvc
+#ServiceMgr += THistSvc()
+#ServiceMgr.THistSvc.Output = [ "MyNewPackage DATAFILE='testAug21.root' OPT='RECREATE'" ]
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKCachedBankGen.py b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKCachedBankGen.py
new file mode 100644
index 00000000000..ff3f5da387a
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKCachedBankGen.py
@@ -0,0 +1,91 @@
+#--------------------------------------------------------------
+# Full job is a list of algorithms
+#--------------------------------------------------------------
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+#--------------------------------------------------------------
+# Enable monitoring
+#--------------------------------------------------------------
+from PerfMonComps.PerfMonFlags import jobproperties
+jobproperties.PerfMonFlags.doSemiDetailedMonitoring = True
+
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+
+#--------------------------------------------------------------
+# initialize algo(s)
+#--------------------------------------------------------------
+CachedBankGen = FTKCachedBankGenAlgo("CachedBankGen")
+
+
+#--------------------------------------------------------------
+#
+#--------------------------------------------------------------
+from AthenaCommon.AppMgr import theApp
+theApp.EvtMax = 1 # Number of events to be processed
+
+from AthenaCommon.AppMgr import ServiceMgr
+
+from GaudiSvc.GaudiSvcConf import THistSvc
+ServiceMgr += THistSvc()
+
+ServiceMgr.THistSvc.Output += ["outputHisto DATAFILE='outputHisto.root' OPT='RECREATE'"]
+
+#--------------------------------------------------------------
+# Set output level threshold (DEBUG, INFO, WARNING, ERROR, FATAL)
+#--------------------------------------------------------------
+CachedBankGen.OutputLevel = DEBUG
+
+
+#--------------------------------------------------------------
+# Algorithms Private Options
+#--------------------------------------------------------------
+
+# --- 'fixed arguments'
+
+# --- mandatory runArgs
+runArgsFromTrfMandatory = ['pmap_path', 'rmap_path', 'ssmapTSP_path', 'ssmapAM_path',
+ 'curreg','cursubreg','infile','outfile','IBLMode','hwmodeid_tsp']
+
+
+# --- Check that the arguments in the mandatory list are set
+for mandArg in runArgsFromTrfMandatory:
+ print "Seeking mandArg: " + mandArg
+ if not hasattr(runArgs, mandArg):
+ raise RuntimeError, 'Failed to find mandatory runtime argument for transform: ' + mandArg
+ else:
+ attr = getattr(runArgs, mandArg)
+ print "Setting mandArg: " + mandArg
+ setattr(CachedBankGen, mandArg, getattr(runArgs, mandArg))
+
+
+# --- optional arguments
+TSPBankGen.maxpatt = -1
+
+runArgsFromTrfOptional = { 'maxpatt': -1 # IBLMode, hwmodeid_ccache, hwmodeid_pcache
+ }
+skipArgs = []
+
+# --- Set the PattBankGenRoot properties
+for runArgName in runArgsFromTrfOptional.keys():
+ print 'Setting FTKCachedBankGen argument'+runArgName
+ if runArgName in skipArgs:
+ print 'Skipping ' + runArgName
+ continue
+ if hasattr(runArgs, runArgName):
+ print "if " + runArgName
+ setattr(CachedBankGen, runArgName, getattr(runArgs, runArgName))
+ else:
+ print "else " + runArgName
+ setattr(CachedBankGen, runArgName, runArgsFromTrfOptional[runArgName])
+
+
+#--------------------------------------------------------------
+# Add algo
+#--------------------------------------------------------------
+alg += CachedBankGen
+
+#--------------------------------------------------------------
+
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKConstantGen.py b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKConstantGen.py
new file mode 100644
index 00000000000..3232e8a442d
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKConstantGen.py
@@ -0,0 +1,46 @@
+#-----------------------------------------------------------------------------
+# Athena imports
+#-----------------------------------------------------------------------------
+from AthenaCommon.Constants import *
+from AthenaCommon.AppMgr import theApp
+from AthenaCommon.AppMgr import ServiceMgr
+#import AthenaPoolCnvSvc.ReadAthenaPool
+
+from PerfMonComps.PerfMonFlags import jobproperties as pmjp
+pmjp.PerfMonFlags.doSemiDetailedMonitoring = True # to enable monitoring
+
+from AthenaCommon.AlgSequence import AlgSequence
+job = AlgSequence()
+
+from AthenaCommon.Logging import logging
+ftkLog = logging.getLogger('FTKConstantGen')
+
+# force the maximum number of events to 0
+theApp.EvtMax = 0 # -1 means all events
+
+import glob
+#-----------------------------------------------------------------------------
+# Algorithms
+#-----------------------------------------------------------------------------
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+FTKConstGenAlgo = FTKConstGenAlgo('FTKConstGenAlgo', OutputLevel = INFO)
+
+if not hasattr(runArgs, "genconst") :
+ setattr(runArgs, "genconst", True)
+FTKConstGenAlgo.genconst= runArgs.genconst
+
+FTKConstGenAlgo.nbank=runArgs.NBanks
+
+# if not hasattr(runArgs, "allregions") :
+# setattr(runArgs, "allregions", False)
+# FTKConstGenAlgo.allregion = runArgs.allregions
+
+if not hasattr(runArgs, "bankregion") :
+ setattr(runArgs, "bankregion", 0)
+FTKConstGenAlgo.region=runArgs.bankregion # if the previous option is True this line is not important
+
+FTKConstGenAlgo.merged_file_path=runArgs.inputFTKMatrixFile[0]
+#FTKConstGenAlgo.OutputFileName = runArgs.outputFTKGoodMatrixFile
+job += FTKConstGenAlgo
+#-----------------------------------------------------------------------------
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKMatrixMerge.py b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKMatrixMerge.py
new file mode 100644
index 00000000000..3684347fbce
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKMatrixMerge.py
@@ -0,0 +1,48 @@
+#-----------------------------------------------------------------------------
+# Athena imports
+#-----------------------------------------------------------------------------
+from AthenaCommon.Constants import *
+from AthenaCommon.AppMgr import theApp
+from AthenaCommon.AppMgr import ServiceMgr
+#import AthenaPoolCnvSvc.ReadAthenaPool
+
+from PerfMonComps.PerfMonFlags import jobproperties as pmjp
+pmjp.PerfMonFlags.doSemiDetailedMonitoring = True # to enable monitoring
+
+from AthenaCommon.AlgSequence import AlgSequence
+job = AlgSequence()
+
+from AthenaCommon.Logging import logging
+ftkLog = logging.getLogger('FTKMatrixMerge')
+
+# force the maximum number of events to 0
+theApp.EvtMax = 0 # -1 means all events
+
+import glob
+#-----------------------------------------------------------------------------
+# Algorithms
+#-----------------------------------------------------------------------------
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+FTKConstGenAlgo = FTKConstGenAlgo('FTKConstGenAlgo', OutputLevel = INFO)
+FTKConstGenAlgo.merging=True
+if not hasattr(runArgs, "genconst") :
+ setattr(runArgs, "genconst", False)
+FTKConstGenAlgo.genconst= runArgs.genconst
+FTKConstGenAlgo.nbank=runArgs.NBanks
+if not hasattr(runArgs, "allregions") :
+ setattr(runArgs, "allregions", False)
+FTKConstGenAlgo.allregion = runArgs.allregions
+if not hasattr(runArgs, "bankregion") :
+ setattr(runArgs, "bankregion", 0)
+FTKConstGenAlgo.region=runArgs.bankregion # if the previous option is True this line is not important
+if hasattr(runArgs,'FTKMatrixFileRegEx') :
+ if hasattr(runArgs,'MaxInputFiles'):
+ FTKConstGenAlgo.file_path = glob.glob(runArgs.FTKMatrixFileRegEx)[:runArgs.MaxInputFiles]
+ else:
+ FTKConstGenAlgo.file_path = glob.glob(runArgs.FTKMatrixFileRegEx)
+else :
+ FTKConstGenAlgo.file_path=runArgs.inputFTKMatrixFile
+FTKConstGenAlgo.OutputFileName = runArgs.outputMergedFTKMatrixFile
+job += FTKConstGenAlgo
+#-----------------------------------------------------------------------------
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKMatrixReduction.py b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKMatrixReduction.py
new file mode 100644
index 00000000000..c5303250b7e
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKMatrixReduction.py
@@ -0,0 +1,59 @@
+#-----------------------------------------------------------------------------
+# Athena imports
+#-----------------------------------------------------------------------------
+from AthenaCommon.Constants import *
+from AthenaCommon.AppMgr import theApp
+from AthenaCommon.AppMgr import ServiceMgr
+#import AthenaPoolCnvSvc.ReadAthenaPool
+
+from PerfMonComps.PerfMonFlags import jobproperties as pmjp
+pmjp.PerfMonFlags.doSemiDetailedMonitoring = True # to enable monitoring
+
+from AthenaCommon.AlgSequence import AlgSequence
+job = AlgSequence()
+
+from AthenaCommon.Logging import logging
+ftkLog = logging.getLogger('FTKMatrixReduction')
+
+# force the maximum number of events to 0
+theApp.EvtMax = 0 # -1 means all events
+
+import glob
+#-----------------------------------------------------------------------------
+# Algorithms
+#-----------------------------------------------------------------------------
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+FTKConstGenAlgo = FTKConstGenAlgo('FTKConstGenAlgo', OutputLevel = INFO)
+
+if not hasattr(runArgs, "eightLayer") :
+ setattr(runArgs, "eightLayer", True)
+FTKConstGenAlgo.eightLayer= runArgs.eightLayer
+
+FTKConstGenAlgo.nbank=runArgs.NBanks
+
+if not hasattr(runArgs, "allregions") :
+ setattr(runArgs, "allregions", False)
+FTKConstGenAlgo.allregion = runArgs.allregions
+
+if not hasattr(runArgs, "bankregion") :
+ setattr(runArgs, "bankregion", 0)
+FTKConstGenAlgo.region=runArgs.bankregion # if the previous option is True this line is not important
+
+from PyJobTransforms.trfUtils import findFile
+
+pmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/' + runArgs.pmap_12L)# 12L pmap for OfflineID
+#pmap_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_12LiblHW.pmap')# 12L pmap for HWlikeID
+print "Using PMAP 12L:", pmap_path
+
+pmap_8L_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/' + runArgs.pmap_8L)# 8L pmap for OfflineID
+#pmap_8L_path = findFile(os.environ['DATAPATH'], 'ftk_configuration/map_files/raw_8LcIbl123.pmap')# 8L pmap for HWlikeID
+print "Using PMAP 8L :", pmap_8L_path
+
+FTKConstGenAlgo.pmap_path=pmap_path;
+FTKConstGenAlgo.pmap_8L_path=pmap_8L_path;
+
+FTKConstGenAlgo.LayerChange_path=runArgs.inputFTKMatrixFile[0]
+#FTKConstGenAlgo.OutputFileName = runArgs.outputFTKGoodMatrixFile
+job += FTKConstGenAlgo
+#-----------------------------------------------------------------------------
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKPattBankGenRoot.py b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKPattBankGenRoot.py
new file mode 100644
index 00000000000..e05a401ccb7
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/share/skeleton.FTKPattBankGenRoot.py
@@ -0,0 +1,192 @@
+#--------------------------------------------------------------
+# Full job is a list of algorithms
+#--------------------------------------------------------------
+from AthenaCommon.Constants import *
+from AthenaCommon.AppMgr import theApp
+from AthenaCommon.AppMgr import ServiceMgr
+
+#--------------------------------------------------------------
+# Enable monitoring
+#--------------------------------------------------------------
+from PerfMonComps.PerfMonFlags import jobproperties
+jobproperties.PerfMonFlags.doSemiDetailedMonitoring = True
+
+from AthenaCommon.AlgSequence import AlgSequence
+alg = AlgSequence()
+
+from AthenaCommon.Logging import logging
+ftkLog = logging.getLogger('FTKPattGen')
+
+
+from AthenaCommon.AppMgr import ToolSvc
+from TrigFTKBankGen.TrigFTKBankGenConf import *
+
+
+## uncommet the following lines of DEBUG_BEAMSPOT is selected
+#IOVDbSvc = Service("IOVDbSvc")
+#IOVDbSvc.GlobalTag="OFLCOND-SDR-BS14T-IBL-CORR-06-02"
+#import MagFieldServices.SetupField
+
+
+#--------------------------------------------------------------
+# initialize algo(s)
+#--------------------------------------------------------------
+PattBankGenRoot = FTKPattGenRootAlgo("FTKPattGenRootAlgo")
+
+
+#--------------------------------------------------------------
+#
+#--------------------------------------------------------------
+
+
+# Number of events to be processed
+#theApp.EvtMax = 1
+if hasattr(runArgs,"maxEvents") :
+ theApp.EvtMax = runArgs.maxEvents
+else :
+ theApp.EvtMax = 1
+
+
+#from GaudiSvc.GaudiSvcConf import THistSvc
+from AthenaServices.AthenaServicesConf import AtRanluxGenSvc
+
+ServiceMgr += AtRanluxGenSvc()
+rndstream="RANDOM"
+seed1=1
+seed2=1
+if hasattr(runArgs, 'rndStreamName'):
+ rndstream=runArgs.rndStreamName
+
+if hasattr(runArgs, 'seed'):
+ seed1=runArgs.seed
+
+if hasattr(runArgs, 'seed2'):
+ seed2=runArgs.seed2
+
+ServiceMgr.AtRanluxGenSvc.Seeds= [ rndstream+" %d %d" %(seed1,seed2) ]
+
+ServiceMgr.AtRanluxGenSvc.EventReseeding = False
+
+#ServiceMgr += THistSvc()
+#ServiceMgr.THistSvc.Output += ["outputHisto DATAFILE='outputHisto.root' OPT='RECREATE'"]
+
+#--------------------------------------------------------------
+# Set output level threshold (DEBUG, INFO, WARNING, ERROR, FATAL)
+#--------------------------------------------------------------
+
+# Output level for PattBankGenAlgo only
+PattBankGenRoot.OutputLevel = INFO
+
+
+
+#--------------------------------------------------------------
+# Algorithms Private Options
+#--------------------------------------------------------------
+
+# --- mandatory runArgs
+#runArgsFromTrfMandatory = ['fitconstants_path', 'slices_path', 'sectors_path']
+runArgsFromTrfMandatory = ['pmap_path', 'rmap_path', 'ssmap_path','curreg','hwmodeid','trials','IBLMode',
+ 'fitconsts', 'slices', 'sectors']
+
+# Maps' path
+from PyJobTransforms.trfUtils import findFile
+import os.path
+
+# pmap
+if hasattr(runArgs, 'pmap_path'):
+ if os.path.exists(runArgs.pmap_path):
+ PattBankGenRoot.pmap_path = runArgs.pmap_path
+ else:
+ print "Cannot find file: "+runArgs.pmap_path
+ raise RuntimeError, "RMAP path seems not to exist. Abort"
+else:
+ raise RuntimeError, "PMAP was not set. Abort"
+
+# rmap
+if hasattr(runArgs, 'rmap_path'):
+ if os.path.exists(runArgs.rmap_path):
+ PattBankGenRoot.rmap_path = runArgs.rmap_path
+ else:
+ print "Cannot find file: "+runArgs.rmap_path
+ raise RuntimeError, "RMAP path seems not to exist. Abort"
+else:
+ raise RuntimeError, "RMAP was not set. Abort"
+
+# ssmap
+if hasattr(runArgs, 'ssmap_path'):
+ if os.path.exists(runArgs.ssmap_path):
+ print "ssmap_path " + runArgs.ssmap_path
+ PattBankGenRoot.ssmap_path = runArgs.ssmap_path
+ else:
+ print "Cannot find file: "+runArgs.ssmap_path
+ raise RuntimeError, "SSMAP path seems not to exist. Abort."
+else:
+ raise RuntimeError, "SSMAP was not set. Abort"
+
+
+# --- Check that the arguments in the mandatory list are set
+for mandArg in runArgsFromTrfMandatory:
+ print "mandArg " + mandArg
+ if not hasattr(runArgs, mandArg):
+ raise RuntimeError, 'Failed to find mandatory runtime argument for transform: ' + mandArg
+ else:
+ attr = getattr(runArgs, mandArg)
+ print attr
+ setattr(PattBankGenRoot, mandArg, getattr(runArgs, mandArg))
+
+
+# --- optional arguments
+runArgsFromTrfOptional = {'curreg': 32,
+# 'seed': 0, #Seed of random generator
+ 'rndStreamName': "RANDOM", #athena name of random stream
+# 'smear': True,
+ 'hwmodeid': 0,
+ 'ModuleLUTPath': "",
+ 'IBLMode': 1,
+ 'FixEndcapL0' : 0,
+ 'pconst_overlap': 2,
+ 'trials': 100000, # Number of trials of the trackInvertion function
+ 'phi_min': -999,
+ 'phi_max': 999,
+ 'c_min': -0.00104,
+ 'c_max': 0.00104,
+ 'd0_min': -999,
+ 'd0_max': 999,
+ 'z0_min': -999,
+ 'z0_max': 999,
+ 'eta_min': -999,
+ 'eta_max': 999,
+ 'd0_alpha': 0.0,
+ 'beamspotX': 0.0,
+ 'beamspotY': 0.0,
+ 'ITkMode': False,
+ 'keep7of8': 0,
+ 'tolerance7of8': 0.1,
+
+ 'OutputFile': "patterns.root", # output file (should end with .root)
+ 'ModuleGeometryFile': "none",
+ 'sectorSelection' : 1
+ }
+skipArgs = []
+
+
+# --- Set the PattBankGenRoot properties
+for runArgName in runArgsFromTrfOptional.keys():
+ print 'Setting PattBankGenRoot argument'+runArgName
+ if runArgName in skipArgs:
+ print 'Skipping ' + runArgName
+ continue
+
+ if hasattr(runArgs, runArgName):
+ print "if " + runArgName
+ setattr(PattBankGenRoot, runArgName, getattr(runArgs, runArgName))
+ else:
+ print "else " + runArgName
+ setattr(PattBankGenRoot, runArgName, runArgsFromTrfOptional[runArgName])
+
+
+alg += PattBankGenRoot
+
+#==============================================================
+# End of job options file
+#==============================================================
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/FTKBankGenAlgo.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKBankGenAlgo.cxx
new file mode 100644
index 00000000000..2524898f61d
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKBankGenAlgo.cxx
@@ -0,0 +1,1460 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+
+#include "TrigFTKBankGen/FTKBankGenAlgo.h"
+#include "TrigFTKBankGen/FTKPattKDTree.h"
+#include "TrigFTKSim/FTKSetup.h"
+#include "TrigFTKSim/FTK_SGHitInput.h"
+#include "TrigFTKSim/atlClustering.h"
+
+#include "GaudiKernel/MsgStream.h"
+
+#include "GaudiKernel/ITHistSvc.h"
+#include "TH1.h"
+#include "TH2.h"
+#include "TTree.h"
+#include "TROOT.h"
+
+#include <sstream>
+#include <iostream>
+#include <fstream>
+#include <cmath>
+#include <stdio.h>
+#include <math.h>
+
+// SET THIS TO 1 TO ENABLE VERBOSE DEBUGGING OF REGION ASSIGNMENT
+#define RMAP_DEBUG_PRINT 0
+
+#define NEWTOWERASSIGN
+
+using namespace std;
+/////////////////////////////////////////////////////////////////////////////
+FTKBankGenAlgo::FTKBankGenAlgo(const std::string& name, ISvcLocator* pSvcLocator) :
+ AthAlgorithm(name, pSvcLocator),
+ m_hitInputTool("FTK_SGHitInput/FTK_SGHitInput"),
+ m_nevent(0),m_nbanks(0), m_nsubregions(1),
+ m_verbosity(0),
+ m_BarrelOnly(false),
+ m_rawMode(1),
+ m_IBLMode(1), // flag to change the IBLMode
+ m_fixEndcapL0(false),
+ m_ITkMode(false), // flag to use ITk geometry
+ m_pmap(0x0),
+ m_rmap(0x0),
+ m_pmap_path(),
+ m_rmap_path(),
+ m_Clustering(true),
+ m_SaveClusterContent(false),
+ m_DiagClustering(true),
+ m_SctClustering(false),
+ m_PixelClusteringMode(1),
+ m_DuplicateGanged(true),
+ m_GangedPatternRecognition(false),
+ m_UseIdentifierHash(false),
+ m_sector_dir_path(),
+ m_gcon_dir_path(),
+ m_par_c_min(0),
+ m_par_c_slices(0),
+ m_par_phi_max(0),
+ m_par_phi_min(0),
+ m_par_phi_slices(0),
+ m_par_d0_max(0),
+ m_par_d0_min(0),
+ m_par_d0_slices(0),
+ m_par_z0_max(0),
+ m_par_z0_min(0),
+ m_par_z0_slices(0),
+ m_par_eta_max(0),
+ m_par_eta_min(0),
+ m_par_eta_slices(0),
+ m_PT_THRESHOLD(0),
+ m_TRAIN_PDG(0),
+ m_constant(0),
+ m_const_test_mode(false),
+ m_compsecbitmask()
+{
+ declareProperty("NEvent",m_nevent);
+ // number of banks
+ declareProperty("NBanks",m_nbanks);
+ declareProperty("NSubRegions",m_nsubregions);
+ declareProperty("BarrelOnly",m_BarrelOnly);
+ declareProperty("rawMode",m_rawMode);
+ declareProperty("pmap_path",m_pmap_path);
+ declareProperty("rmap_path",m_rmap_path);
+ declareProperty("const_test_mode",m_const_test_mode);
+ declareProperty("sector_dir_path",m_sector_dir_path);
+ declareProperty("gcon_dir_path",m_gcon_dir_path);
+ // slice option
+ declareProperty("par_c_max",m_par_c_max);
+ declareProperty("par_c_min",m_par_c_min);
+ declareProperty("par_c_slices",m_par_c_slices);
+ declareProperty("par_phi_max",m_par_phi_max);
+ declareProperty("par_phi_min",m_par_phi_min);
+ declareProperty("par_phi_slices",m_par_phi_slices);
+ declareProperty("par_d0_max",m_par_d0_max);
+ declareProperty("par_d0_min",m_par_d0_min);
+ declareProperty("par_d0_slices",m_par_d0_slices);
+ declareProperty("par_z0_max",m_par_z0_max);
+ declareProperty("par_z0_min",m_par_z0_min);
+ declareProperty("par_z0_slices",m_par_z0_slices);
+ declareProperty("par_eta_max",m_par_eta_max);
+ declareProperty("par_eta_min",m_par_eta_min);
+ declareProperty("par_eta_slices",m_par_eta_slices);
+ // slice option
+ declareProperty("PT_THRESHOLD",m_PT_THRESHOLD);
+ declareProperty("TRAIN_PDG",m_TRAIN_PDG);
+
+ //clustering option 20140219
+ declareProperty("Clustering",m_Clustering);
+ declareProperty("SaveClusterContent",m_SaveClusterContent);
+ declareProperty("DiagClustering",m_DiagClustering);
+ declareProperty("SctClustering",m_SctClustering);
+ declareProperty("PixelClusteringMode",m_PixelClusteringMode);
+ declareProperty("DuplicateGanged",m_DuplicateGanged);
+ declareProperty("GangedPatternRecognition",m_GangedPatternRecognition);
+
+ declareProperty("UseIdentifierHash",m_UseIdentifierHash);
+
+ declareProperty("IBLMode",m_IBLMode);
+ declareProperty("FixEndcapL0",m_fixEndcapL0);
+ declareProperty("ITkMode",m_ITkMode);
+}
+FTKBankGenAlgo::~FTKBankGenAlgo()
+{
+ if (m_pmap) delete m_pmap;
+ if (m_rmap) delete m_rmap;
+
+ delete [] m_constant;
+
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+StatusCode FTKBankGenAlgo::initialize(){
+ // get the reference to the central standalone instance
+ FTKSetup &ftkset = FTKSetup::getFTKSetup();
+
+ // Set Option (temporaly way for checking standalone ver. -> should change to better way) //
+ ftkset.setBarrelOnly(m_BarrelOnly);
+ ftkset.setRawMode(m_rawMode);
+ ftkset.setVerbosity(m_verbosity);
+ ftkset.setIBLMode(m_IBLMode);
+ ftkset.setfixEndcapL0(m_fixEndcapL0);
+ ftkset.setITkMode(m_ITkMode);
+
+ MsgStream log(msgSvc(), name());
+ log << MSG::INFO << "FTKBankGenAlgo::initialize()" << endmsg;
+
+ StatusCode sc;
+ sc = service("THistSvc", m_thistSvc);
+ if(sc.isFailure()) {
+ log << MSG::FATAL <<("Unable to retrieve THistSvc")<< endmsg;
+ return StatusCode::FAILURE;
+ }
+
+ sc = m_hitInputTool.retrieve();
+ if (sc.isFailure()) {
+ log << MSG::FATAL << "Could not retrieve FTK_SGHitInput tool" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ else {
+ log << MSG::INFO << "Setting FTK_SGHitInput tool" << endmsg;
+ }
+
+ log << MSG::INFO << "Read the logical layer definitions" << endmsg;
+ // Look for the main plane-map
+ if (m_pmap_path.empty()) {
+ log << MSG::FATAL << "Main plane map definition missing" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ else {
+ m_pmap = new FTKPlaneMap(m_pmap_path.c_str());
+ if (!(*m_pmap)) {
+ log << MSG::FATAL << "Error using plane map: " << m_pmap_path << endmsg;
+ return StatusCode::FAILURE;
+ }
+ }
+
+ // set the pmap address to FTKDataInput to use in processEvent
+ FTKDataInput *hitinput = m_hitInputTool->reference();
+ hitinput->setPlaneMaps(m_pmap,0x0);
+
+ // Create the region map objects
+ if (m_rmap_path.empty()) {
+ log << MSG::FATAL << "Region map file needed" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ else {
+ log << MSG::INFO << "Creating region map" << endmsg;
+ m_rmap = new FTKRegionMap(m_pmap, m_rmap_path.c_str());
+ if (!(*m_rmap)) {
+ log << MSG::FATAL << "Error creating region map from: " << m_rmap_path.c_str() << endmsg;
+ return StatusCode::FAILURE;
+ }
+ }
+
+ /* initialize the clustering global variables, decalred in TrigFTKSim/atlClusteringLNF.h */
+ //hitinput->setClustering(m_Clustering);
+ hitinput->setPixelClusteringMode(m_PixelClusteringMode);
+ hitinput->setSctClustering(m_SctClustering);
+ /*
+ SAVE_CLUSTER_CONTENT = m_SaveClusterContent;
+ DIAG_CLUSTERING = m_DiagClustering;
+ // SCT_CLUSTERING = m_SctClustering;
+ PIXEL_CLUSTERING_MODE = m_PixelClusteringMode;
+ DUPLICATE_GANGED = m_DuplicateGanged;
+ GANGED_PATTERN_RECOGNITION = m_GangedPatternRecognition;
+*/
+ hitinput->init();
+
+ // get detector configurations
+ m_nplanes=m_pmap->getNPlanes();
+ m_nregions = m_rmap->getNumRegions();
+ TotalDim=m_pmap->getTotalDim();
+ initPattTree(m_nbanks, m_nplanes+1,TotalDim);
+
+ log << MSG::INFO << "get dim" << TotalDim <<endmsg;
+
+ TotalDim2=TotalDim*TotalDim;
+
+ m_sectorID =(int *) calloc(m_nplanes,sizeof(int));
+ m_hashID =(int *) calloc(m_nplanes,sizeof(int));
+ m_tmpVec = (double *) calloc(TotalDim,sizeof(double));
+ m_tmpxC = (double *) calloc(TotalDim,sizeof(double));
+ m_tmpxD = (double *) calloc(TotalDim,sizeof(double));
+ m_tmpxPhi = (double *) calloc(TotalDim,sizeof(double));
+ m_tmpxCoto = (double *) calloc(TotalDim,sizeof(double));
+ m_tmpxZ =(double *) calloc(TotalDim,sizeof(double));
+ m_tmpcovx = (double *) calloc(TotalDim*TotalDim,sizeof(double));
+
+ npatterns =(int *) calloc(m_nbanks,sizeof(int));
+ ntracks =(int *) calloc(m_nbanks,sizeof(int));
+
+ p_ss = (int *) calloc(m_nplanes+1,sizeof(int));
+ p_hashss = (int *) calloc(m_nplanes+1,sizeof(int));
+ tmphitc = (double *) calloc(TotalDim,sizeof(double));
+ tmpxC = (double *) calloc(TotalDim,sizeof(double));
+ tmpxD = (double *) calloc(TotalDim,sizeof(double));
+ tmpxPhi = (double *) calloc(TotalDim,sizeof(double));
+ tmpxCoto = (double *) calloc(TotalDim,sizeof(double));
+ tmpxZ =(double *) calloc(TotalDim,sizeof(double));
+ tmpcovx = (double *) calloc(TotalDim*TotalDim,sizeof(double));
+ for(int i=0;i<m_nbanks;i++){
+ ntracks[i]=0;
+ npatterns[i]=0;
+ }
+
+ if(m_const_test_mode){
+
+ count_pass_filter = 0;
+ count_match = 0;
+ coverage = 0;
+
+ strcpy(c_sector_dir_path, m_sector_dir_path.c_str());
+ strcpy(c_gcon_dir_path, m_gcon_dir_path.c_str());
+
+ //sector file
+ //TODO tmp_SSID.resize(m_nplanes); to check
+ tmp_ssID = (int *) calloc(m_nplanes+1,sizeof(int));
+ tmp_hashID = (int *) calloc(m_nplanes+1,sizeof(int));
+
+ for(int ibank=0;ibank<m_nbanks;ibank++){
+ sprintf(str_sector_file_name,"%s/sectors_raw_%dL_reg%d.patt",c_sector_dir_path,m_nplanes,ibank);
+
+ ifstream sector_file(str_sector_file_name);
+ if(!sector_file){
+ log << MSG::FATAL << str_sector_file_name << " not found!!" << endmsg;
+ return StatusCode::FAILURE;
+ }
+
+ //read header
+ for(int i=0;i<2;i++)sector_file >> header[i];
+
+ while(!sector_file.eof()){
+
+ addPattReturnCode=0;
+
+ //read sector
+ sector_file >> tmp_sectorID;
+
+ for(int i=0;i<m_nplanes;i++) sector_file >> tmp_ssID[i];
+ tmp_ssID[m_nplanes]=tmp_sectorID;
+ sector_file >> dummy;
+ sector_file >> dummy;
+
+ int_c.clear();
+ int_phi.clear();
+ int_d0.clear();
+ int_z0.clear();
+ int_eta.clear();
+
+ int_c.resize(1);
+ int_phi.resize(1);
+ int_d0.resize(1);
+ int_z0.resize(1);
+ int_eta.resize(1);
+
+ Mtmp.nhit=1;
+ addPattReturnCode=addKDPattern(ibank, m_const_test_mode, tmp_ssID, tmp_hashID, 1,Mtmp,tmphitc,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ int_c,int_phi,int_d0,int_z0,int_eta);
+
+ }//sector_file.eof
+ log << MSG::INFO << "sector:region " << ibank << " loaded." << endmsg;
+
+ }
+
+ m_constant = new FTKConstantBank*[m_nbanks];
+ for (int i=0;i<m_nbanks;++i)m_constant[i]= 0;
+
+ //setBank function
+ for(int ibank=0;ibank<m_nbanks;ibank++){
+ sprintf(str_gcon_file_name,"%s/corrgen_raw_%dL_reg%d.gcon",c_gcon_dir_path,m_nplanes,ibank);
+ ifstream gcon_file(str_gcon_file_name);
+ if(!gcon_file){
+ log << MSG::FATAL << str_gcon_file_name << " not found!!" << endmsg;
+ return StatusCode::FAILURE;
+ }
+
+ gcon_path = str_gcon_file_name;
+ log << MSG::INFO << "gcon file = " << gcon_path << endmsg;
+ m_constant[ibank] = new FTKConstantBank(TotalDim,gcon_path.c_str());
+ log << MSG::INFO << "constant:region " << ibank << " loaded." << endmsg;
+ }
+
+ base_trk.setNCoords(TotalDim);
+ base_trk.setNPlanes(m_nplanes);
+ base_trk.setNMissing(0);
+
+ char filename_coverage[30];
+ sprintf(filename_coverage,"coverage.txt");
+ file_coverage.open(filename_coverage);
+
+ char filename_truthpar[30];
+ sprintf(filename_truthpar,"truthpar.txt");
+ file_truthpar.open(filename_truthpar);
+
+ char filename_recpar[30];
+ sprintf(filename_recpar,"recpar.txt");
+ file_recpar.open(filename_recpar);
+
+ char filename_resolution[30];
+ sprintf(filename_resolution,"resolution.txt");
+ file_resolution.open(filename_resolution);
+
+ file_resolution << "dC dD dPhi dZ0 dCoto Chi2" << endl;
+
+ }else{//const test mode
+
+ char filename[30];
+
+ sprintf(filename,"matrix_%dL_%dDim.root",m_nplanes,TotalDim);
+
+ file = new TFile(filename,"recreate");
+ gROOT->cd();
+
+ char name[5];
+ char title[20];
+
+ for(int i = 0; i < m_nregions; ++i){
+
+ sprintf(name,"am%d",i);
+ sprintf(title,"Ambank %d para",i);
+
+ m_tree[i] = new TTree(name, title);
+ }
+
+ m_montree = new TTree("montree", "monitor tree");
+ m_montree->Branch("monval", m_monval, "m_monval[100]/l");
+ for(int i=0;i<100;i++){
+ m_monval[i]=0;
+ }// for i
+
+ m_slicetree=new TTree("slice", "slice para");
+
+ for(int i = 0; i < m_nregions; ++i){
+ m_tree[i]->Branch("ndim",&TotalDim,"ndim/I");
+ m_tree[i]->Branch("ndim2",&TotalDim2,"ndim2/I");
+ m_tree[i]->Branch("Vec", m_tmpVec,"Vec[ndim]/D");
+ m_tree[i]->Branch("nplanes",&m_nplanes,"nplanes/I");
+ m_tree[i]->Branch("sectorID", m_sectorID,"sectorID[nplanes]/I");
+ m_tree[i]->Branch("hashID", m_hashID,"hashID[nplanes]/I");
+ m_tree[i]->Branch("nhit", &m_nhit,"nhit/F");
+ m_tree[i]->Branch("tmpC", &m_tmpC,"tmpC/D");
+ m_tree[i]->Branch("tmpD", &m_tmpD,"tmpD/D");
+ m_tree[i]->Branch("tmpPhi", &m_tmpPhi,"tmpPhi/D");
+ m_tree[i]->Branch("tmpCoto", &m_tmpCoto,"tmpCoto/D");
+ m_tree[i]->Branch("tmpZ", &m_tmpZ,"tmpZ/D");
+ m_tree[i]->Branch("tmpxC", m_tmpxC,"tmpxC[ndim]/D");
+ m_tree[i]->Branch("tmpxD", m_tmpxD,"tmpxD[ndim]/D");
+ m_tree[i]->Branch("tmpxPhi", m_tmpxPhi,"tmpxPhi[ndim]/D");
+ m_tree[i]->Branch("tmpxCoto", m_tmpxCoto,"tmpxCoto[ndim]/D");
+ m_tree[i]->Branch("tmpxZ", m_tmpxZ,"tmpxZ[ndim]/D");
+ m_tree[i]->Branch("tmpcovx", m_tmpcovx,"tmpcovx[ndim2]/D");
+
+ m_intc= new std::vector<short>;
+ m_intphi= new std::vector<short>;
+ m_intd0= new std::vector<short>;
+ m_intz0= new std::vector<short>;
+ m_inteta= new std::vector<short>;
+
+ m_tree[i]->Branch("tmpintc", &m_intc);
+ m_tree[i]->Branch("tmpintphi", &m_intphi);
+ m_tree[i]->Branch("tmpintd0", &m_intd0);
+ m_tree[i]->Branch("tmpintz0", &m_intz0);
+ m_tree[i]->Branch("tmpinteta", &m_inteta);
+
+ m_tree[i]->Print();
+ }
+ m_slicetree->Branch("c_max",&m_par_c_max);
+ m_slicetree->Branch("phi_max",&m_par_phi_max);
+ m_slicetree->Branch("d0_max",&m_par_d0_max);
+ m_slicetree->Branch("z0_max",&m_par_z0_max);
+ m_slicetree->Branch("eta_max",&m_par_eta_max);
+
+ m_slicetree->Branch("c_min",&m_par_c_min);
+ m_slicetree->Branch("phi_min",&m_par_phi_min);
+ m_slicetree->Branch("d0_min",&m_par_d0_min);
+ m_slicetree->Branch("z0_min",&m_par_z0_min);
+ m_slicetree->Branch("eta_min",&m_par_eta_min);
+
+ m_slicetree->Branch("c_slices",&m_par_c_slices);
+ m_slicetree->Branch("phi_slices",&m_par_phi_slices);
+ m_slicetree->Branch("d0_slices",&m_par_d0_slices);
+ m_slicetree->Branch("z0_slices",&m_par_z0_slices);
+ m_slicetree->Branch("eta_slices",&m_par_eta_slices);
+
+ }//const test mode
+
+ return StatusCode::SUCCESS;
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+StatusCode FTKBankGenAlgo::execute() {
+ MsgStream log(msgSvc(), name());
+ log << MSG::INFO << "FTKBankGenAlgo::execute() start" << endmsg;
+
+ // clear array of variables
+ m_hitInputTool->reference()->clearRawHits();
+ m_hitInputTool->reference()->clearTruthTrack();
+ hitslist.clear();
+ m_trainingtracks.clear();
+
+ int_c.clear();
+ int_phi.clear();
+ int_d0.clear();
+ int_z0.clear();
+ int_eta.clear();
+
+ // event difinitions
+ doPattgen = true;
+ GoodTrack = true;
+
+ /////////////////////////////////////////////////////
+ // track validation part (copied from th_rd.c) //
+ ////////////////////////////////////////////////////
+ //hits & truth track is get from SGHitInput
+ m_hitInputTool->reference()->readData();
+ truth_track = m_hitInputTool->reference()->getTruthTrack();
+
+ // clustering hits
+ m_hitInputTool->reference()->processEvent(false);
+ nhits = m_hitInputTool->reference()->getNHits();
+ hitslist = m_hitInputTool->reference()->getHitsList();
+
+ nmuon = 0;
+ eta = 0;
+ pt =0;
+ truth_phi = 0;
+
+ // reset the hits of maps
+ m_maphits.clear();
+
+ for(unsigned int i=0;i<truth_track.size();++i){
+ c = truth_track[i].getQ()/(sqrt(truth_track[i].getPX()*truth_track[i].getPX()+truth_track[i].getPY()*truth_track[i].getPY()));
+ c=(c)/2.;
+ pt = TMath::Sqrt(truth_track[i].getPX()*truth_track[i].getPX()+truth_track[i].getPY()*truth_track[i].getPY())/1000;
+ eta = TMath::ASinH(truth_track[i].getPZ()/TMath::Sqrt(truth_track[i].getPX()*truth_track[i].getPX()+truth_track[i].getPY()*truth_track[i].getPY()));
+ truth_phi = TMath::ATan2(truth_track[i].getPY(),truth_track[i].getPX());
+ log << MSG::DEBUG << "i pt = "<<i<< " " <<pt<<endmsg;
+ log << MSG::DEBUG << "i c = "<<i<< " " <<c<<endmsg;
+ log << MSG::DEBUG << "i eta = "<<i<<" "<<eta<<endmsg;
+ log << MSG::DEBUG << "i phi = "<<i<<" "<<truth_phi<<endmsg;
+ log << MSG::DEBUG << "i pdgcode = "<<i<<" "<<truth_track[i].getPDGCode()<<endmsg;
+
+ m_monval[0]++;
+ if(truth_track[i].getBarcode() >= 1000000 || (abs(truth_track[i].getPDGCode())!=m_TRAIN_PDG))continue;
+
+ m_monval[1]++;
+
+ // if(truth_track[i].getBarcode() >= 100000)continue;
+ if(pt>m_PT_THRESHOLD && abs(truth_track[i].getPDGCode())==m_TRAIN_PDG){//GoodTrack!!
+ // add the track to the list of good tracks
+ m_trainingtracks.push_back(truth_track[i]);
+ // prepare the entry in the map of hits
+ m_maphits[truth_track[i].getBarcode()] = vector<FTKHit>();
+
+ m_monval[2]++;
+ }
+ }
+
+ // get the number of tracks
+ nmuon = m_trainingtracks.size();
+
+ for(unsigned int j=0;j<hitslist.size();j++){ // loop over the hits
+ // get the predominant barcode for the current hit
+ int hitbarcode = hitslist[j].getTruth().best_barcode();
+ // check if the barcode is associated to a good muon
+ map<int, vector<FTKHit> >::iterator ilist = m_maphits.find(hitbarcode);
+
+ // skip the hits if not associated to a good truth tracks
+ if(ilist==m_maphits.end()) continue;
+
+ // add hit to the list
+ (*ilist).second.push_back(hitslist[j]);
+ } // end loop over the hits
+
+ if(0==nmuon) GoodTrack=false;
+
+ ///////////////////////////////////////////////////////
+ ////// make sector //////
+ ///////////////////////////////////////////////////////
+
+ if(!GoodTrack){log << MSG::DEBUG << " bad track event " << endmsg;}
+ else{ // there are good tracks
+
+ //****************************************************************//
+ //**** pattgen copied and modfied from TrigFTKLib ********//
+ //***************************************************************//
+
+
+ for(int nTruth=0;nTruth<nmuon;nTruth++){ // loop over the tracks
+ m_monval[3]++;
+ doPattgen = true;
+
+ int sector=0,sector_HW=0,cur_plane=0,cur_sector=0,cur_sector_HW=0;
+ int phi_mod=0,eta_mod=0,section=0;
+ int cur_phi=0,cur_eta=0,cur_section=0;
+ int sdiff=0,ediff=0,pdiff=0;
+ int rmax=0;
+
+ std::vector<filterSecHit> sechit(m_nplanes);//initialize truth by truth
+ for (int ilayer=0; ilayer!=m_nplanes; ++ilayer) {
+ // enforce the initialization of the sechit elements
+ sechit[ilayer].count = 0; // it is enough to just set the layer counter to 0
+ }
+ // this block works on the hit related to this tracks
+ FTKTruthTrack &curtrack = m_trainingtracks[nTruth];
+
+ // list of hits associated to the current truth track
+ vector<FTKHit> &curhitlist = m_maphits[curtrack.getBarcode()]; // it has to exist, at least has empty list
+ for(unsigned int i=0;i<curhitlist.size();++i){ // loop over the hits
+
+ // point to the current
+ FTKHit &curhit = curhitlist[i];
+#define FHIT sechit[curhit.getPlane()] //filtered hit for the current logical layer
+
+ if(doPattgen && GoodTrack){//don't make pattern
+ //int plane= curhit.getPlane();
+ sector = curhit.getSector();
+ sector_HW = curhit.getIdentifierHash();
+
+ phi_mod = curhit.getPhiModule();
+
+ if(curhit.getIsBarrel()){//section and eta definition
+ eta_mod = curhit.getEtaModule();
+ section =0;
+ }else{
+ eta_mod = curhit.getEtaModule();
+ section = curhit.getSection();
+ }
+
+ log << MSG::DEBUG << "sector, phi_mod, eta_mod, section = " <<sector << " " << phi_mod << " " << eta_mod << " " << section << endmsg;
+
+ if(0==FHIT.count){ // initialize
+ FHIT.count++;
+ cur_plane = curhit.getPlane();
+ cur_sector = curhit.getSector();
+ cur_sector_HW = curhit.getIdentifierHash();
+
+ // copy the original hit, this should be the only required information
+ FHIT.originalhit = curhit;
+
+ FHIT.plane = cur_plane;
+ FHIT.sector = cur_sector;
+ FHIT.sector_HW = cur_sector_HW;
+ FHIT.ndim = curhit.getDim();
+ FHIT.CSide = curhit.getCSide();
+ FHIT.ASide = curhit.getASide();
+
+ if(2==FHIT.ndim){
+ FHIT.dimx = curhit.getCoord()[0];
+ FHIT.dimy = curhit.getCoord()[1];
+ }else if(1==FHIT.ndim){
+ FHIT.dimx = curhit.getCoord()[0];
+ FHIT.dimy = 0;
+ }
+ }else if(1==FHIT.count){ // the position was already filled with an hit
+ cur_plane = FHIT.originalhit.getPlane();
+ cur_sector = FHIT.originalhit.getSector();
+ cur_phi = FHIT.originalhit.getPhiModule();;
+ cur_eta = FHIT.originalhit.getEtaModule();;
+ cur_section = FHIT.originalhit.getSection();
+
+ // check for overlap
+ FHIT.count++;
+
+ if(sector == cur_sector){
+ // if(sector_ref==FHIT.sector_ref){
+ log << MSG::DEBUG << "Two hits on same module, exiting filterHitsSec " <<endmsg;
+ doPattgen = false;
+ m_monval[4]++;
+ }else {//not same sector
+ sdiff = cur_section-section;
+ pdiff = cur_phi-phi_mod;
+ ediff = cur_eta-eta_mod;
+
+ if(ediff==0 && sdiff==0){
+ section=cur_section;
+ //TODO why is this not a global declaration?
+ if(8==m_nregions){
+ rmax=m_rmap->getRegionMapItem(m_nregions-1,curhit.getPlane(),section).getMax();
+ }else if(64==m_nregions || 32==m_nregions){
+ rmax=m_rmap->getRegionMapItem(m_nregions-1,curhit.getPlane(),section).getTotMod();
+ }
+
+ if(pdiff == 1 || pdiff== -rmax ){
+ // Do noting ,we got the right one
+ }else if(pdiff == -1 ||pdiff == rmax ){
+ //swap hits, the new one is the right one
+ FHIT.originalhit = curhit;
+ FHIT.sector =sector;
+ FHIT.sector_HW =sector_HW;
+ FHIT.ndim = curhit.getDim();
+ if(2==FHIT.ndim){
+ FHIT.dimx = curhit.getCoord()[0];
+ FHIT.dimy = curhit.getCoord()[1];
+ }else if(1==FHIT.ndim){
+ FHIT.dimx = curhit.getCoord()[0];
+ FHIT.dimy = 0;
+ }
+ }else{
+ //Not overlap, free and exit
+ log << MSG::DEBUG << "Hits are too far away in phi, exiting filterHitsSec " <<endmsg;
+ doPattgen =false;
+ m_monval[5]++;
+ }
+
+ // sector overlap is a perfectly reasonable situation with forward disks
+ // eta and phi will differ in general in this case
+ // Take the lower-z hit preferentially (right thing to do? d0/pT tradeoff)
+ // But something fishy is going on if we've got two hits on the same disk.
+ }
+ else if (sdiff!=0){//ediff sdiff orig
+ // If one is barrel and one endcap, it's definitely OK, take the barrel hit
+ if(m_pmap->getPlane(curhit.getPlane(),cur_section).getIsEndcap()
+ && !m_pmap->getPlane(curhit.getPlane(),section).getIsEndcap()){
+ // Swap hits, the new one is the right one
+ FHIT.originalhit = curhit;
+ FHIT.sector=sector;
+ FHIT.sector_HW=sector_HW;
+ FHIT.ndim=curhit.getDim();
+ if(2==FHIT.ndim){
+ FHIT.dimx=curhit.getCoord()[0];
+ FHIT.dimy=curhit.getCoord()[1];
+ }else if(1==FHIT.ndim){
+ FHIT.dimx=curhit.getCoord()[0];
+ FHIT.dimy=0;
+ }
+ log << MSG::DEBUG << " Swapping to use barrel hit " <<endmsg;
+ }
+ else if (!m_pmap->getPlane(curhit.getPlane(),cur_section).getIsEndcap()
+ && m_pmap->getPlane(curhit.getPlane(),cur_section).getIsEndcap()){
+
+ log << MSG::DEBUG << " Fine, we've got the barrel hit " <<endmsg;
+ // Two endcap hits : same disk: discard
+ }
+ else if (m_pmap->getPlane(curhit.getPlane(),cur_section).getPDisk()
+ ==m_pmap->getPlane(curhit.getPlane(),section).getPDisk() ){
+ log << MSG::DEBUG << "Two modules hit in same physical disk" <<m_pmap->getPlane(curhit.getPlane(),cur_section).getPDisk()<< "exiting filterHitsSec " <<endmsg;
+ doPattgen=false;
+ m_monval[6]++;
+ //Two endcap hits on opposite sides makes no sense: discard
+ }
+ else if((FHIT.CSide && curhit.getASide())
+ || (FHIT.ASide && curhit.getCSide())){
+
+ log << MSG::DEBUG << " Endcap disks on opposite sides hit, exiting filterHitsSec " <<endmsg;
+
+ doPattgen=false;
+ m_monval[7]++;
+ //Two endcap hits on same side: different disks: take the lower-z
+ }
+ else {
+
+ log << MSG::DEBUG << " Keeping the lower-z of the two disks hit " <<endmsg;
+ //If CURHIT disk is a lower number, we've got the right one
+
+ if(m_pmap->getPlane(curhit.getPlane(),cur_section).getPDisk()
+ >m_pmap->getPlane(curhit.getPlane(),section).getPDisk()){
+ // Swap hits, the new one is the right one
+ FHIT.originalhit = curhit;
+ FHIT.sector=sector;
+ FHIT.sector_HW=sector_HW;
+ FHIT.ndim=curhit.getDim();
+ if(2==FHIT.ndim){
+ FHIT.dimx=curhit.getCoord()[0];
+ FHIT.dimy=curhit.getCoord()[1];
+ }else if(1==FHIT.ndim){
+ FHIT.dimx=curhit.getCoord()[0];
+ FHIT.dimy=0;
+ }
+ }
+ log << MSG::DEBUG << "\t\t\t...Kept " <<endmsg;
+ }
+
+
+ }
+ else{//ediff != 0: Different eta idx is no good, free and exit
+ log << MSG::DEBUG << "Hits are in different eta, exiting filterHitsSec " <<endmsg;
+ doPattgen=false;
+ m_monval[8]++;
+ }
+ }//not same sector
+ }
+ else if(FHIT.count>1) {
+
+ log << MSG::DEBUG << "Too many hits on a plane, exiting filterHitsSec " <<endmsg;
+ doPattgen = false;
+ m_monval[9]++;
+ } // How many do hits exist in same plane.
+ log << MSG::DEBUG << " gethittype "<<FHIT.hittype <<endmsg;
+ log << MSG::DEBUG << " getdim "<<FHIT.ndim <<endmsg;
+ }//do pattgen
+ } // end loop over the hits
+
+ curhitlist.clear();
+
+ if(doPattgen && GoodTrack){
+ for(int i=0;i<m_nplanes;++i){
+ log << MSG::DEBUG << "getsector pre " <<sechit[i].sector<< endmsg;
+ if(0==sechit[i].count){
+ doPattgen = false;
+ m_monval[10]++;
+ log << MSG::DEBUG << "Plane"<< i <<" has no hits, exiting filterHitsSec "<< endmsg;
+
+ }
+ }
+ }
+
+ /////////////////////////////////////////////////////////
+ ///// which regios?(old format) /////
+ ///////////////////////////////////////////////////////
+
+ int nregion=-999;
+ if(!doPattgen){
+ log << MSG::INFO << "don't generate sector table " <<endmsg;
+ nregion=-999;
+ } else {
+
+ // use sectorID as Identifier Hash
+ /* tkaji
+ if (m_UseIdentifierHash){
+ for(int i=0;i<m_nplanes;++i) {
+ log << MSG::DEBUG << "getsector " <<sechit[i].sector_HW<< endmsg;
+ p_ss[i]=sechit[i].sector_HW;
+ }
+ }
+ else {
+ for(int i=0;i<m_nplanes;++i) {
+ log << MSG::DEBUG << "getsector " <<sechit[i].sector<< endmsg;
+ p_ss[i]=sechit[i].sector;
+ }
+ }
+ */
+
+ for(int i=0;i<m_nplanes;i++){
+ p_hashss[i] = sechit[i].sector_HW;
+ p_ss[i] = sechit[i].sector;
+ }
+
+ p_hashss[m_nplanes]=0;//for sectors, we set it to zero.
+ p_ss[m_nplanes]=0;//for sectors, we set it to zero.
+
+#ifdef NEWTOWERASSIGN
+ // the sector is set by the first hit, the following hits can only confirm it
+ m_compsecbitmask.set();// all towers are possible
+
+ for(int i=0;i<m_nplanes;++i) { // loop over the layer
+ for (int itwr=0;itwr!=m_nbanks;++itwr) { // loop over hte towers
+ if (!m_rmap->isHitInRegion(sechit[i].originalhit,itwr))
+ m_compsecbitmask.set(itwr,false); // switch off an impossible sector
+ } // end loop over the towers
+ } // end loop over the layers
+
+ /* At the end of the previous loop the compsecbitmask object is 1 for
+ * every tower that *is* compatible with the given sector, is 0 for
+ * every tower that *isn't* compatible with the given sector
+ */
+ nregion = -999;
+ for (int itwr=0;itwr!=m_nbanks;++itwr) { // loop over the towers
+ if (m_compsecbitmask.test(itwr)) { // good tower block
+ // when the previous test is true the current tower is compatible with the sector
+ if (m_ITkMode) {
+ // for now just give preference to lowest region index for simplicity
+ nregion = itwr;
+ break;
+ }
+ else if (m_nbanks==64) { // 64 towers block case
+ if (nregion==-999) {
+ // initialize the tower selection variable
+ nregion = itwr;
+ }
+ else {
+ // assumes 64 towers in 4 barrels, with 16 phi slices each
+ const int curphi(itwr%16);
+ const int refphi(nregion%16);
+ const int cureta(itwr/16);
+ const int refeta(nregion/16);
+ if (cureta!=refeta){
+ // central towers are preferred
+ if (refeta==0&&cureta==1) nregion = itwr;
+ else if (refeta==3&&cureta==2) nregion = itwr;
+ // in case both towers are central, the last layer decides
+ else if (refeta==1&&cureta==2&&sechit[m_nplanes-1].originalhit.getEtaCode()>=6) nregion = itwr;
+ }
+ else {
+ /* If the the current and reference towers are in the same eta
+ * region, the greater index is preferred. The exception is to
+ * consider refphi=0 preferred to curphi=15, to restore the simmetry
+ */
+ if (refphi==0 && curphi==15) continue; // nothing to do
+ else nregion = itwr; // normal case
+ }
+ }
+ }
+ else if (m_nbanks==32) { // 32 towers block case
+ if (nregion==-999) {
+ // initialize the tower selection variable
+ nregion = itwr;
+ }
+ else {
+ // assumes 64 towers in 4 barrels, with 16 phi slices each
+ const int curphi(itwr%8);
+ const int refphi(nregion%8);
+ const int cureta(itwr/8);
+ const int refeta(nregion/8);
+ if (cureta!=refeta){
+ // central towers are preferred
+ if (refeta==0&&cureta==1) nregion = itwr;
+ else if (refeta==3&&cureta==2) nregion = itwr;
+ // in case both towers are central, the last layer decides
+ else if (refeta==1&&cureta==2&&sechit[m_nplanes-1].originalhit.getEtaCode()>=6) nregion = itwr;
+ }
+ else {
+ /* If the the current and reference towers are in the same eta
+ * region, the greater index is preferred. The exception is to
+ * consider refphi=0 preferred to curphi=7, to restore the simmetry
+ */
+ if (refphi==0 && curphi==7) continue; // nothing to do
+ else nregion = itwr; // normal case
+ }
+ }
+ }
+ else if (m_nbanks==8) {
+ nregion = itwr; // the bank with the lowest index wins
+ break;
+ }
+ else {
+ cerr << "Error" << endl;
+ return StatusCode::FAILURE;
+ }
+ } // end good tower block
+ }
+#else // OLD TOWER ASSIGNEMENT CODE, DEPRECATED
+#include "TrigFTKBankGen/decodeEtacode.h"
+ if(m_nbanks==8){
+
+ std::vector<int>result(m_nplanes);
+
+ for(int i=0;i<m_nplanes;++i) {
+ // log << MSG::DEBUG << "getsector " <<sechit[i].sector<< endmsg;
+ log << MSG::DEBUG << "getsector " <<sechit[i].sector<< endmsg;
+ log << MSG::DEBUG << "getplane " <<sechit[i].plane<< endmsg;
+
+ p_ss[m_nplanes]=0;//for sectors, we set it to zero.
+
+ // int phi = sechit[i].sector/1000;
+ int phi = sechit[i].sector/1000;
+ result[i]=0;
+
+ if(sechit[i].sector%1000<20){//section and eta definition
+ // if(sechit[i].sector_ref%1000<20){//section and eta definition
+ section=0;
+ }else{
+ section=sechit[i].sector%10;
+ // section=sechit[i].sector_ref%10;
+ }
+
+ // Region 0 is special: some negative phi indices
+ if((phi <= m_rmap->getRegionMapItem(0,i,section).getMax() ||
+ phi >= m_rmap->getRegionMapItem(m_nregions-1,i,section).getTotMod() +
+ m_rmap->getRegionMapItem(0,i,section).getMin()+1 )) {
+ result[i] += 1;
+ }
+
+ /* Check other regions */
+ for(int k = 1; k < m_nregions; ++k) {
+ if((phi <= m_rmap->getRegionMapItem(k,i,section).getMax()) &&
+ (phi >= m_rmap->getRegionMapItem(k,i,section).getMin())) {
+ result[i] += 1 << k;
+ }
+ }
+ } // loop over planes
+
+ int region = result[0];
+
+ for(int k=1; k<m_nplanes; ++k)
+ region &= result[k];
+
+ if(!region){
+ nregion =-999;
+ }else if(region == (1 << (m_nbanks-1))+1){// 7 and 0, return 0
+ nregion=0;
+ }else{
+ nregion=0;
+ while((region >> nregion) != 1)
+ ++nregion;
+ }
+ result.clear();
+ }else if(m_nbanks==64){
+
+ ////////////////////////////////////////////
+ ///////// region for 64-tower ////////////
+ ////////////////////////////////////////////
+
+ for(int i=0;i<m_nplanes;++i) {
+ log << MSG::DEBUG << "getsector " <<sechit[i].sector<< endmsg;
+ p_ss[i]=sechit[i].sector;
+ // log << MSG::DEBUG << "getsector " <<sechit[i].sector_ref<< endmsg;
+ // p_ss[i]=sechit[i].sector_ref;
+ }
+ p_ss[m_nplanes]=0;//for sectors, we set it to zero.
+
+ ////////////////////////////////////////////////////////
+ // Eta (analogues to whichRegionEta of rmap_rd.c) //
+ ////////////////////////////////////////////////////////
+
+ static int pM_eta[]={2,3,5,7};
+ static int *result_eta;
+ static int allocated_eta = 0;
+ int region_eta = -1;
+ // total tower id's where we switch tower-eta
+ const int t0 = 0;
+ const int t1 = m_rmap->getNumRegionsPhi()*1;
+ const int t2 = m_rmap->getNumRegionsPhi()*2;
+ const int t3 = m_rmap->getNumRegionsPhi()*3;
+ int i_eta,itower_eta;
+ int aside,cside,etamod;
+ int found_eta;
+ int tower1_OK;
+
+ if(!allocated_eta) {
+ allocated_eta = 1;
+ if((result_eta = (int *)calloc(m_nplanes,sizeof(int))) == NULL)
+ log << MSG::ERROR << "whichRegionAlt: could not allocate result space" << endmsg;
+ }
+ for(i_eta=0;i_eta<m_nplanes;++i_eta)
+ result_eta[i_eta] = 1;
+
+ for(i_eta=0;i_eta<m_nplanes;++i_eta) {
+ cside = CSIDE_INT(p_ss[i_eta]);
+ aside = ASIDE_INT(p_ss[i_eta]);
+ // endcap C-side
+ if(cside==1) {
+ result_eta[i_eta] *= pM_eta[0];
+ log << MSG::DEBUG << " ->eta: "<< sechit[i_eta].sector <<" - - -" << endmsg;
+ // log << MSG::DEBUG << " ->eta: "<< sechit[i_eta].sector_ref <<" - - -" << endmsg;
+ }
+ // endcap A-side
+ else if(aside==1) {
+ result_eta[i_eta] *= pM_eta[3];
+ log << MSG::DEBUG << " ->eta: - - - " <<sechit[i_eta].sector<< endmsg;
+ // log << MSG::DEBUG << " ->eta: - - - " <<sechit[i_eta].sector_ref<< endmsg;
+ }
+ // barrel
+ else {
+ etamod = ETA_MOD_INT(p_ss[i_eta]);
+ if(etamod >= m_rmap->getRegionMapItem(t0,i_eta,0).getEtaMin() && etamod<=m_rmap->getRegionMapItem(t0,i_eta,0).getEtaMax() ) {
+ result_eta[i_eta] *= pM_eta[0];
+ }
+ if(etamod >= m_rmap->getRegionMapItem(t1,i_eta,0).getEtaMin() && etamod<=m_rmap->getRegionMapItem(t1,i_eta,0).getEtaMax() ) {
+ result_eta[i_eta] *= pM_eta[1];
+ }
+ if(etamod >= m_rmap->getRegionMapItem(t2,i_eta,0).getEtaMin() && etamod<=m_rmap->getRegionMapItem(t2,i_eta,0).getEtaMax() ) {
+ result_eta[i_eta] *= pM_eta[2];
+ }
+ if(etamod >= m_rmap->getRegionMapItem(t3,i_eta,0).getEtaMin() && etamod<=m_rmap->getRegionMapItem(t3,i_eta,0).getEtaMax() ) {
+ result_eta[i_eta] *= pM_eta[3];
+ }
+ }
+ }
+
+ // now find intersection of result_eta[i_eta] arrays for all i
+ tower1_OK = 0;
+ for(itower_eta=0;itower_eta<4;itower_eta++) {
+ found_eta=1;
+ for(i_eta=0;i_eta<m_nplanes;++i_eta) {
+ if((result_eta[i_eta]%pM_eta[itower_eta])!=0) {found_eta = 0; break; }
+ }
+ if(found_eta==1) {
+ if(itower_eta==1) {
+ tower1_OK = 1;
+ continue;
+ }
+ else {
+ if(itower_eta==2 && tower1_OK==1) {
+ if( ETA_MOD_INT(p_ss[m_nplanes-1]) <= 5 ) region_eta=1; else region_eta=2;
+ break;
+ }
+ region_eta = itower_eta;
+ break;
+ }
+ }
+ else if(itower_eta==2 && tower1_OK==1){
+ region_eta=1;
+ break;
+ }
+ }
+
+ /////////////
+ // Phi //
+ /////////////
+
+ static int pM_phi[]={2,3,5,7,11,13,17,19,23,29,31,37,41,43,47,53};
+ static int *result_phi;
+ static int allocated_phi = 0;
+ const int debug = RMAP_DEBUG_PRINT;
+ int region_phi = -1;
+ int i_phi,itow,itower_phi;
+ int phi,section_phi;
+ int found_phi;
+ int tow0_OK;
+ int j;
+
+ if(-1 != region_eta){//eta is defined
+ if(!allocated_phi) {
+ allocated_phi = 1;
+ if((result_phi = (int *)calloc(m_nplanes,sizeof(int))) == NULL)
+ log << MSG::ERROR << "whichRegionAlt: could not allocate result space" << endmsg;
+ }
+ for(i_phi=0;i_phi<m_nplanes;++i_phi)
+ result_phi[i_phi] = 1;
+
+ for(i_phi=0;i_phi<m_nplanes;++i_phi) {
+ phi = PHI_MOD_INT(p_ss[i_phi]);
+ section_phi = SECTION_INT(p_ss[i_phi]);
+ for(itow=0;itow<m_rmap->getNumRegionsPhi();itow++) {
+ itower_phi = m_rmap->getNumRegionsPhi()*region_eta + itow;
+ if( m_rmap->getRegionMapItem(itower_phi,i_phi,section_phi).getPhiMin() <= m_rmap->getRegionMapItem(itower_phi,i_phi,section_phi).getPhiMax() ) {
+ if(phi >= m_rmap->getRegionMapItem(itower_phi,i_phi,section_phi).getPhiMin() && phi <= m_rmap->getRegionMapItem(itower_phi,i_phi,section_phi).getPhiMax() ) {
+ result_phi[i_phi] *= pM_phi[itow];
+ }
+ } else {
+ if(phi >= m_rmap->getRegionMapItem(itower_phi,i_phi,section_phi).getPhiMin() || phi <= m_rmap->getRegionMapItem(itower_phi,i_phi,section_phi).getPhiMax() ) {
+ result_phi[i_phi] *= pM_phi[itow];
+ }
+ }
+
+ }
+ if(debug) {
+ printf(" ->phi: ");
+ for(j=0;j<m_rmap->getNumRegionsPhi();j++) printf("%s ", ((result_phi[i_phi]%pM_phi[j]==0)?"x":"-"));
+ printf(" phi=%d section=%d",phi,section_phi);
+ printf("\n");
+ }
+ }
+
+ // now find intersection of result_phi[i_phi] arrays for all i
+ tow0_OK = 1;
+ for(i_phi=0;i_phi<m_nplanes;++i_phi) {
+ if((result_phi[i_phi]%pM_phi[0])!=0) { tow0_OK = 0; break; }
+ }
+
+ for(itow=m_rmap->getNumRegionsPhi()-1;itow>=0;itow--) {
+ found_phi=1;
+ for(i_phi=0;i_phi<m_nplanes;++i_phi) {
+ if((result_phi[i_phi]%pM_phi[itow])!=0) {found_phi = 0; break; }
+ }
+ if(found_phi==1) {
+ if(itow==m_rmap->getNumRegionsPhi()-1 && tow0_OK==1) {
+ region_phi = 0;
+ break;
+ }
+ else {
+ region_phi = itow;
+ break;
+ }
+ }
+ }
+
+ }//eta is defined
+
+ /////////////////////
+ // which region?? //
+ /////////////////////
+
+ if(region_eta==-1) {
+ nregion = -999;
+ log << MSG::DEBUG <<" bad eta!!!" <<endmsg;
+ }else if(region_phi==-1) {
+ nregion = -999;
+ log << MSG::DEBUG <<" bad phi!!!" <<endmsg;
+ } else {
+ nregion = region_eta * m_rmap->getNumRegionsPhi() + region_phi;
+ }
+ }//nbanks == 64
+#endif // END OLD TOWER ASSIGNEMENT CODE BLOCK
+ }//do pattgen
+
+ //cout << "REGION " << nregion << endl;
+
+ //ConstGenTest: check coverage
+ if(m_const_test_mode) {
+ addPattReturnCode=-1;
+ if(-999!=nregion){
+
+ count_pass_filter++;
+
+ int_c.resize(1);
+ int_phi.resize(1);
+ int_d0.resize(1);
+ int_z0.resize(1);
+ int_eta.resize(1);
+
+ Mtmp.nhit=5;
+ p_ss[m_nplanes]=std::numeric_limits<int>::max();
+ p_hashss[m_nplanes]=std::numeric_limits<int>::max();
+
+ addPattReturnCode=addKDPattern(nregion, m_const_test_mode, p_ss,p_hashss, 1,Mtmp,tmphitc,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ int_c,int_phi,int_d0,int_z0,int_eta);
+
+ if(-1!=addPattReturnCode){//find sector
+ count_match++;
+ the_sectorID = addPattReturnCode;
+ }
+ }
+
+ coverage = double(count_match)/double(count_pass_filter);
+ log << MSG::INFO <<" count_pass_filter count_match= "<< count_pass_filter << " " << count_match <<endmsg;
+ log << MSG::INFO <<" coverage= "<< coverage <<endmsg;
+ }//const test mode
+
+
+ ///////////////////////////////////////////////////////////////////////////////
+ ///////////// corrgen part ////////////////
+ //////////////////////////////////////////////////////////////////////////////
+ if(doPattgen==true){
+ m_monval[11]++;
+
+ int npixel=0,nsct=0;
+
+ ///////geopar.c
+ // This updated by JAA for new code to calculate d0
+ d = curtrack.getD0();
+ z0 =curtrack.getZ();
+
+ x0 = curtrack.getX() -(curtrack.getQ())*(curtrack.getPY()) ;
+ y0 = curtrack.getY() +(curtrack.getQ())*(curtrack.getPX()) ;
+ c = curtrack.getQ()/(sqrt(curtrack.getPX()*curtrack.getPX()+curtrack.getPY()*curtrack.getPY()));
+ c=(c)/2.;
+ phi = atan2(-x0*fabs(curtrack.getQ())/(curtrack.getQ()),y0*fabs(curtrack.getQ())/(curtrack.getQ()));
+ coto = curtrack.getPZ()/sqrt(curtrack.getPX()*curtrack.getPX()+curtrack.getPY()*curtrack.getPY());
+
+ // // //d = - 1/((c)*2.) + sqrt(x0*x0+y0*y0)*fabs(c)/(c);
+
+ // // //d0 is the distance of beam spot
+ // // double a,b;
+ // // //for NOMINAL
+ // // double beam_x=0;
+ // // double beam_y=0;
+ // //for data
+ // // double beam_x=-0.324;
+ // // double beam_y=0.628;
+ // double tmp_x = curtrack.getX() - beam_x;
+ // double tmp_y = curtrack.getY() - beam_y;
+
+ // a=curtrack.getPY()/curtrack.getPX();
+ // b=curtrack.getY()-a*curtrack.getX();
+ // d=fabs(-1*a*beam_x + beam_y - b )/sqrt(a*a + 1);
+
+ // if(tmp_x*curtrack.getPY() - tmp_y*curtrack.getPX() >= 0 ){
+ // d = -1*d;
+ // }
+
+ ////////////////////////////////////////////////////////
+ /////// slice file part ////////////////////
+ ////////////////////////////////////////////////////////
+ int_c.resize(1);
+ int_phi.resize(1);
+ int_d0.resize(1);
+ int_z0.resize(1);
+ int_eta.resize(1);
+
+ int_c[0]= (c-m_par_c_min)*m_par_c_slices/(m_par_c_max-m_par_c_min);
+ int_phi[0]=(phi-m_par_phi_min*M_PI)*m_par_phi_slices/((m_par_phi_max-m_par_phi_min)*M_PI);
+ int_d0[0]=(d-m_par_d0_min)*m_par_d0_slices/(m_par_d0_max-m_par_d0_min);
+ int_z0[0]=(z0-m_par_z0_min)*m_par_z0_slices/(m_par_z0_max-m_par_z0_min);
+ int_eta[0]=(coto-sinh(m_par_eta_min))*m_par_eta_slices/(sinh(m_par_eta_max)-sinh(m_par_eta_min));
+
+ log << MSG::DEBUG << "check 38 int region ntruth c d0 phi z0 coto = " << nregion << " " << nTruth << " " << int_c[0] << " " << int_d0[0] << " " << int_phi[0] << " " << int_z0[0] << " " << int_eta[0] << endmsg;
+
+ ////////////////////////////////// slice file part end
+
+ Mtmp.C=c;
+ Mtmp.D=d;
+ Mtmp.Coto=coto;
+ Mtmp.Z=z0;
+
+ // region = 3,4,5 (default). Testing: add in region 6!
+ if(!m_const_test_mode){
+ if(8==m_nbanks){
+ if (nregion>=3 && nregion <= 5) {
+ while(phi<0) phi += 2*M_PI;
+ }
+ }else if(64==m_nbanks){
+ if( nregion==9 || nregion==10 || nregion==25 || nregion==26 || nregion==41 || nregion==42 || nregion==57 || nregion==58 ) {
+ while(phi<0) phi += 2*M_PI;
+ }
+ }else if(32==m_nbanks){
+ if( nregion%8==4 || nregion%8==5 ){
+ if(phi<0) phi += 2*M_PI;
+ }
+ }
+ if(m_ITkMode){
+ // Play it safe for now since region map is not yet solidified
+ while( phi < 0 ) phi += 2*M_PI;
+ }
+ }
+
+ Mtmp.Phi=phi;
+
+ log << MSG::DEBUG << "check 35 region ntruth c d0 phi z0 coto = " << nregion << " " << nTruth << " " << c << " " << d << " " << phi << " " << z0 << " " << coto << endmsg;
+
+ for(int i=0;i<m_nplanes;++i){
+ if(2==sechit[i].ndim){
+ npixel++;
+ }else if(1==sechit[i].ndim){
+ nsct++;
+ }
+ }
+
+ log << MSG::DEBUG <<" npixel= "<<npixel<<"nsct= "<<nsct<<endmsg;
+
+ //check constant
+ if(m_const_test_mode){
+ if(-1!=addPattReturnCode){//if find same sector
+ base_trk.setSectorID(the_sectorID);
+
+ int ix,iy;
+
+ for(int j=0;j<npixel;j++){
+ ix = 2*j;
+ iy = 2*j+1;
+ base_trk.setCoord(ix,sechit[j].dimx);
+ base_trk.setCoord(iy,sechit[j].dimy);
+ }
+
+ for(int j=0;j<nsct;j++){
+ ix = 2*npixel+j;
+ base_trk.setCoord(ix,sechit[npixel+j].dimx);
+ }
+
+ FTKConstantBank *current_bank = m_constant[nregion];
+
+ if (!current_bank) { // no valid constants
+ log << MSG::FATAL << "*** Constants for region " << nregion << " - " << 1 << " don't exists" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ /* Do the actual fit - see code in FTKConstantBank::linfit */
+ current_bank->linfit(the_sectorID,base_trk);
+
+ log << MSG::INFO << "\t\t\tReconstructed parameters\n\t\t\t" \
+ << 2.*base_trk.getHalfInvPt() << ' ' << base_trk.getIP() \
+ << ' ' << base_trk.getPhi() << ' ' << base_trk.getZ0() \
+ << ' ' << base_trk.getCotTheta() << endmsg;
+ log << MSG::INFO << "\t\t\tChi2 " << base_trk.getChi2() << endmsg;
+
+ file_resolution << Mtmp.C - 2.*base_trk.getHalfInvPt() << " " << Mtmp.D - base_trk.getIP() << " " << Mtmp.Phi - base_trk.getPhi() << " " << Mtmp.Z - base_trk.getZ0() << " " << Mtmp.Coto - base_trk.getCotTheta() << " " << base_trk.getChi2() << endl;
+ file_truthpar << nregion << " " << Mtmp.C << " " << Mtmp.D << " " << Mtmp.Phi << " " << Mtmp.Z << " " << Mtmp.Coto << endl;
+ file_recpar << nregion << " " << 2.*base_trk.getHalfInvPt() << " " << base_trk.getIP() << " " << base_trk.getPhi() << " " << base_trk.getZ0() << " " << base_trk.getCotTheta() << endl;
+
+ }
+
+ }else{
+ // add a sector to the map of sectors
+
+ std::vector<double> vec(TotalDim);
+
+ for(int j=0;j<npixel;j++){
+ vec[2*(j)]=sechit[j].dimx;
+ vec[2*(j)+1]=sechit[j].dimy;
+ }
+
+ for(int j=0;j<nsct;j++){
+ vec[2*npixel+j]=sechit[npixel+j].dimx;
+ }
+ log << MSG::DEBUG <<" x0= "<<x0<<"y0= "<<y0<<endmsg;
+ // log << MSG::DEBUG <<" c= "<<c<<"d= "<<d<<"phi= "<<phi<<"z0= "<<z0<<"coto= " <<coto<<endmsg;
+
+ for(int i=0;i<TotalDim;i++){
+ // log << MSG::DEBUG <<" vec= "<<vec[i]<<endmsg;
+ tmphitc[i]=vec[i];
+
+ tmpxC[i]=Mtmp.C*vec[i];
+ tmpxD[i]=Mtmp.D*vec[i];
+ tmpxPhi[i]=Mtmp.Phi*vec[i];
+ tmpxCoto[i]=Mtmp.Coto*vec[i];
+ tmpxZ[i]=Mtmp.Z*vec[i];
+
+ for( int j = i; j < TotalDim; j++ ) {
+ tmpcovx[i*TotalDim+j]=vec[i]*vec[j];
+ }
+ }
+
+ if(-999!=nregion){
+ m_monval[12]++;
+ Mtmp.nhit=1;
+
+ addPattReturnCode=addKDPattern(nregion, m_const_test_mode, p_ss, p_hashss, 1,
+ Mtmp,tmphitc,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ int_c,int_phi,int_d0,int_z0,int_eta);
+
+ if(1==addPattReturnCode){
+ ++npatterns[nregion];
+ }else if(2==addPattReturnCode){
+ ++ntracks[nregion];
+ }
+ log << MSG::DEBUG <<"region is "<<nregion<<" #pattern= " <<npatterns[nregion]<<" #ntracks= "<<ntracks[nregion]<<endmsg;
+ }
+
+ }//const test mode
+
+ // sechit.clear();
+ }//do pattgen
+
+ sechit.clear();
+ }//nTruth
+ }//good track
+
+ log << MSG::INFO << "FTKBankGenAlgo::execute() end" << endmsg;
+ return StatusCode::SUCCESS;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+StatusCode FTKBankGenAlgo::finalize() {
+ MsgStream log(msgSvc(), name());
+ log << MSG::INFO << "finalize()" << endmsg;
+
+ ///////////////////////////////////////////
+ //sort function and tree //
+ //////////////////////////////////////////
+ if(m_const_test_mode){
+
+ file_coverage << "denominator numerator coverage" << endl;
+ file_coverage << count_pass_filter << " " << count_match << " " << coverage << endl;
+
+ file_coverage.close();
+ file_resolution.close();
+
+ }else{//const test mode
+
+ for(int b = 0; b<m_nbanks;b++){
+ log << MSG::DEBUG <<"bank= "<<b <<endmsg;
+ sortPatterns(b);
+ for(int i = 0; i<getNPatterns(b);i++){
+ m_intc->clear();
+ m_intphi->clear();
+ m_intd0->clear();
+ m_intz0->clear();
+ m_inteta->clear();
+
+ log << MSG::DEBUG <<"sector " <<i <<" ";
+ for(int k=0;k<m_nplanes;k++){
+ m_sectorID[k]=getPatternSS(b,i,k);
+ m_hashID[k]=getPatthashID(b,i,k);
+ log <<getPatternSS(b,i,k)<<" ";
+ }
+ log <<" "<<getPattNHits(b,i) <<endmsg;
+ m_nhit=getPattNHits(b,i);
+ m_tmpC=getPattC(b,i);
+ m_tmpD=getPattD(b,i);
+ m_tmpPhi=getPattPhi(b,i);
+ m_tmpCoto=getPattCoto(b,i);
+ m_tmpZ=getPattZ(b,i);
+
+ for(int k=0;k<TotalDim;k++){
+ m_tmpVec[k]=getPatthitc(b,i,k);
+ m_tmpxC[k]=getPattxC(b,i,k);
+ m_tmpxD[k]=getPattxD(b,i,k);
+ m_tmpxPhi[k]=getPattxPhi(b,i,k);
+ m_tmpxCoto[k]=getPattxCoto(b,i,k);
+ m_tmpxZ[k]=getPattxZ(b,i,k);
+
+ for(int l=0;l<TotalDim;l++){
+ m_tmpcovx[k*TotalDim+l]=getPattcovx(b,i,k*TotalDim+l);
+ }
+ log <<getPatthitc(b,i,k)<<" ";
+ }
+ log <<" "<<endmsg;
+
+ log << MSG::DEBUG <<"b= "<< b <<" i= "<< i << endmsg;
+ log << MSG::DEBUG <<"C= "<< getPattC(b,i) <<"D= "<< getPattD(b,i) <<"Phi= "<< getPattPhi(b,i)
+ <<"Coto= "<< getPattCoto(b,i) <<"Z= "<< getPattZ(b,i)<<endmsg;
+ m_nsector=npatterns[b];
+ for(int m=0;m<m_nhit;m++){
+ m_intc->push_back(getPattintc(b,i,m));
+ m_intphi->push_back(getPattintphi(b,i,m));
+ m_intd0->push_back(getPattintd0(b,i,m));
+ m_intz0->push_back(getPattintz0(b,i,m));
+ m_inteta->push_back(getPattinteta(b,i,m));
+ }
+ file->cd();
+ m_tree[b]->Fill();
+ gROOT->cd();
+ }
+
+ file->cd();
+ m_tree[b]->Write();
+ gROOT->cd();
+ delete m_tree[b];
+ m_tree[b]=NULL;
+ }
+
+ free(p_ss);
+ free(p_hashss);
+ free(tmphitc);
+ free(tmpxC);
+ free(tmpxD);
+ free(tmpxPhi);
+ free(tmpxCoto);
+ free(tmpxZ);
+ free(tmpcovx);
+
+ file->cd();
+ m_slicetree->Fill();
+ m_slicetree->Write();
+ m_montree->Fill();
+ m_montree->Write();
+ gROOT->cd();
+
+ file->Close();
+ delete file;
+ file=NULL;
+ // }
+ }//const test mode
+ void finishPattTree();
+ // detach data input and output modules from ConfGen to avoid its deletion
+ return StatusCode::SUCCESS;
+}
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/FTKCachedBankGenAlgo.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKCachedBankGenAlgo.cxx
new file mode 100644
index 00000000000..44dd40b20ce
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKCachedBankGenAlgo.cxx
@@ -0,0 +1,355 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "TrigFTKBankGen/FTKCachedBankGenAlgo.h"
+
+#include "GaudiKernel/MsgStream.h"
+
+#include "TrigFTKSim/FTK_CompressedAMBank.h"
+// #include "TrigFTKSim/ftk_dcap.h"
+#include "TrigFTKSim/FTKSetup.h"
+#include "TrigFTKSim/FTKRootFile.h"
+#include "TrigFTKSim/FTKSetup.h"
+
+#include <iostream>
+#include <fstream>
+
+#ifdef UNUSED
+#undef UNUSED
+#endif
+
+using namespace std;
+/////////////////////////////////////////////////////////////////////////////
+
+FTKCachedBankGenAlgo::FTKCachedBankGenAlgo(const std::string& name, ISvcLocator* pSvcLocator):
+ AthAlgorithm(name, pSvcLocator),
+ m_pmap_path(""),
+ m_rmap_path(""),
+ m_modulelut_path(""),
+ m_ssmapTSP_path(""),
+ m_ssmapAM_path(""),
+ m_in_bank_path(""),
+ m_in_cache_path(""),
+ m_out_ccache_path(""),
+ m_out_pcache_path(""),
+ m_hwmodeid_default(0), //! HWMODE input
+ m_hwmodeid_tspcc(-1),
+ m_hwmodeid_dc(-1),
+ m_curreg(0), //! Region of interest
+ m_nSubReg(0), //! number of subregions
+ m_iSubReg(0), //! current subregion
+ m_verbosity(1), //! for debugging
+ m_maxpatt(0), //! max. number of patterns
+ m_IBLMode(1), //! IBLMode
+ m_ITkMode(false), //! ITkMode
+ m_WhereToRun("initialize"),
+ m_flatFormat(0),
+ m_partitionList(""),
+ m_nSectorMax(-1),
+ m_nLamb(0),
+ m_ndcMax(-1),
+ m_wildcardPenalty(0)
+{
+ declareProperty("pmap_path", m_pmap_path);
+ declareProperty("rmap_path", m_rmap_path);
+ declareProperty("ModuleLUTPath",m_modulelut_path);
+ declareProperty("ssmapTSP_path", m_ssmapTSP_path);
+ declareProperty("ssmapAM_path", m_ssmapAM_path);
+
+ declareProperty("infile", m_in_bank_path);
+ declareProperty("cacheIn", m_in_cache_path);
+ declareProperty("pcacheOut", m_out_pcache_path);
+ declareProperty("ccacheOut", m_out_ccache_path);
+
+ declareProperty("sectordefHW0",m_sectordefHW0);
+ declareProperty("sectordefHW2",m_sectordefHW2);
+
+ declareProperty("hwmodeid_tspcc", m_hwmodeid_tspcc);
+ declareProperty("hwmodeid_dc", m_hwmodeid_dc);
+ declareProperty("curreg", m_curreg);
+ declareProperty("maxpatt", m_maxpatt);
+ declareProperty("verbosity", m_verbosity);
+ declareProperty("nSub", m_nSubReg);
+ declareProperty("iSub", m_iSubReg);
+ declareProperty("WhereToRun",m_WhereToRun);
+ declareProperty("IBLMode",m_IBLMode);
+ declareProperty("ITkMode",m_ITkMode);
+ declareProperty("hwmodeid_default",m_hwmodeid_default);
+ declareProperty("flatFormat",m_flatFormat);
+ declareProperty("partitionList",m_partitionList);
+ declareProperty("nSectorMax",m_nSectorMax);
+ declareProperty("nLamb",m_nLamb);
+ declareProperty("ndcMax",m_ndcMax);
+ declareProperty("ndcMaxPlane",m_ndcMaxPlane);
+ declareProperty("wildcardPenalty",m_wildcardPenalty);
+ declareProperty("wildcardPenaltyPlane",m_wildcardPenaltyPlane);
+
+ declareProperty("badmap_path",m_badmap_path);
+ declareProperty("badmap_path_for_hit",m_badmap_path2);
+}
+
+FTKCachedBankGenAlgo::~FTKCachedBankGenAlgo() {
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+StatusCode FTKCachedBankGenAlgo::initialize() {
+
+ // where to run the pattern generation?
+ if ( !( TString(m_WhereToRun).BeginsWith("i",TString::kIgnoreCase)
+ || TString(m_WhereToRun).BeginsWith("f",TString::kIgnoreCase)
+ || TString(m_WhereToRun).BeginsWith("e",TString::kIgnoreCase)) ) {
+ ATH_MSG_WARNING("FTKPattGenRootAlgo() "<< "WhereToRun must start with 'i', 'e' or 'f' referring to the three steps of an athena algorithm (initialize, execute, finalize), but is: "<<m_WhereToRun);
+ return StatusCode::FAILURE;
+ }
+
+
+ //ATH_MSG_INFO ("initialize()");
+ if ( TString(m_WhereToRun).BeginsWith("i",TString::kIgnoreCase) ) return RunCachedBankGenerator();
+ else return StatusCode::SUCCESS;
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+StatusCode FTKCachedBankGenAlgo::execute() {
+ //ATH_MSG_INFO ("execute()");
+ if ( TString(m_WhereToRun).BeginsWith("e",TString::kIgnoreCase) ) return RunCachedBankGenerator();
+ else return StatusCode::SUCCESS;
+}
+
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+
+StatusCode FTKCachedBankGenAlgo::finalize() {
+ //ATH_MSG_INFO ("finalize()");
+ if ( TString(m_WhereToRun).BeginsWith("f",TString::kIgnoreCase) ) return RunCachedBankGenerator();
+ else return StatusCode::SUCCESS;
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+StatusCode FTKCachedBankGenAlgo::RunCachedBankGenerator(){
+ // MsgStream log(msgSvc(), name());
+ ATH_MSG_INFO("initialize() Make FTKCachedBankGenAlgo object.");
+
+ // set HWMODEID
+ FTKSetup &ftkset = FTKSetup::getFTKSetup();
+ ftkset.setHWModeSS(m_hwmodeid_default);
+ // set IBL mode
+ ftkset.setIBLMode(m_IBLMode);
+ // set ITk mode
+ ftkset.setITkMode(m_ITkMode);
+ // set debugging level
+ ftkset.setVerbosity(m_verbosity);
+ // set ITK mode
+ ftkset.setITkMode(m_ITkMode);
+
+ ATH_MSG_INFO(" Setting IBLMode="+TString::Format("%d",m_IBLMode));
+ FTKSetup::getFTKSetup().setIBLMode(m_IBLMode);
+
+ // --- check input
+ if (m_ssmapAM_path.empty() ) {// check ss file
+ ATH_MSG_FATAL("No AM-SS configuration file given");
+ return StatusCode::FAILURE;
+ }
+ if (m_in_bank_path.empty() && m_in_cache_path.empty() ) {// check input file
+ ATH_MSG_FATAL("No input file given");
+ return StatusCode::FAILURE;
+ }
+ if (m_out_ccache_path.empty() && m_out_pcache_path.empty()) {// check ss file
+ ATH_MSG_FATAL("No output file given");
+ return StatusCode::FAILURE;
+ }
+
+ // --- get maps ---
+ const bool force_am_hashmap = false;
+ FTKPlaneMap* pmap = NULL;
+ FTKRegionMap* rmap = NULL;
+ FTKSSMap* ssmapTSP = NULL;
+
+
+ // check whether maps are available in TSP-pattern-file
+ ATH_MSG_INFO("Checking maps in input file.");
+ FTKSSMap* ssmapTSPPatt = 0;
+#ifdef UNUSED
+ if(!m_in_bank_path.empty()) {
+ ssmapTSPPatt=FTKSSMap::GetSSMapFromRootFile
+ (FTKRootFile::Instance()->OpenRootFileReadonly
+ (m_in_bank_path.c_str()),"TSP");
+ if ( ssmapTSPPatt->getIsOK() ) {
+ ATH_MSG_INFO("Using maps from input file.");
+ ssmapTSP = ssmapTSPPatt;
+ // pmap = ssmapTSP->getPlaneMap();
+ // rmap = ssmapTSP->getRegionMap();
+ pmap = ssmapTSP->getModifyablePlaneMap();
+ //FTKPlaneMap::GetPMapFromRootFile(FTKRootFile::Instance()->OpenRootFileReadonly(m_in_bank_path.c_str()));
+ rmap =ssmapTSP->getModifyableRegionMap();
+ //FTKRegionMap::GetRMapFromRootFile(FTKRootFile::Instance()->OpenRootFileReadonly(m_in_bank_path.c_str()));
+ } else {
+ ATH_MSG_INFO("No meta-tags (pmap, ssmap, etc.) found in input file.");
+ }
+ }
+#endif
+ if(ssmapTSPPatt) delete ssmapTSPPatt;
+ ssmapTSPPatt=0;
+
+ // cross checks
+ if ( !ssmapTSP ) {
+ if (m_pmap_path.empty()) { // check pmap file
+ ATH_MSG_FATAL("Main plane map definition missing");
+ return StatusCode::FAILURE;
+ } else {
+ // --- Create the pmap file object
+ ATH_MSG_INFO("initialize() Make FTKPlaneMap.");
+ pmap = new FTKPlaneMap(m_pmap_path.c_str());
+ if (!(*pmap)) {
+ ATH_MSG_FATAL("Error using plane map: "+m_pmap_path);
+ return StatusCode::FAILURE;
+ }
+ }
+ if (m_rmap_path.empty()) { // check rmap file
+ ATH_MSG_FATAL("Region map file needed");
+ return StatusCode::FAILURE;
+ }
+ ATH_MSG_INFO("initialize() Make FTKRegionMap.");
+ rmap = new FTKRegionMap(pmap, m_rmap_path.c_str());
+
+ if (m_ssmapTSP_path.empty() ) {// check ss file
+ ATH_MSG_FATAL("No TSP-SS configuration file given");
+ return StatusCode::FAILURE;
+ }
+ ATH_MSG_INFO("initialize() Make FTKSSMapTSP.");
+ ssmapTSP = new FTKSSMap(rmap, m_ssmapTSP_path.c_str(), force_am_hashmap);
+ } else {
+ // cross check maps
+ if ( !m_pmap_path.empty() && !m_rmap_path.empty() && !m_ssmapTSP_path.empty() ) { // check pmap file
+ // --- Create the pmap file object
+ FTKPlaneMap* pmap2 = new FTKPlaneMap(m_pmap_path.c_str());
+ if (!(*pmap2)) {
+ ATH_MSG_FATAL("Error using plane map: "+m_pmap_path);
+ return StatusCode::FAILURE;
+ }
+ if ( pmap->CalcChecksum() != pmap2->CalcChecksum() ) {
+ ATH_MSG_FATAL("The given plane-map does not fit to the TSP pattern.");
+ return StatusCode::FAILURE;
+ }
+
+ // check rmap file
+ FTKRegionMap* rmap2 = new FTKRegionMap(pmap, m_rmap_path.c_str());
+ if ( rmap2->CalcChecksum() != rmap->CalcChecksum() ) {
+ ATH_MSG_FATAL("The given region-map does not fit to the TSP pattern.");
+ return StatusCode::FAILURE;
+ }
+ // check tsp ss file
+ FTKSSMap* ssmapTSP2 = new FTKSSMap(rmap, m_ssmapTSP_path.c_str(), force_am_hashmap);
+ if ( ssmapTSP->CalcChecksum() != ssmapTSP2->CalcChecksum() ) {
+ ATH_MSG_FATAL("The given TSP ss-map does not fit to the TSP pattern.");
+ return StatusCode::FAILURE;
+ }
+ delete ssmapTSP;
+ ssmapTSP=ssmapTSP2;
+ //delete rmap2;
+ //delete pmap2;
+ }
+ }
+ //ATH_MSG_INFO("initialize() checking module LUT");
+ if((m_hwmodeid_default==2)||(m_hwmodeid_tspcc==2)||(m_hwmodeid_dc==2)) {
+ if(!rmap->isModuleIDLUTloaded()) {
+ if(m_modulelut_path.empty()) {
+ ATH_MSG_FATAL("A module LUT is required when HW SS calculation is required");
+ } else {
+ ATH_MSG_INFO("Loading module LUT from file \""+
+ m_modulelut_path+"\"");
+ rmap->loadModuleIDLUT(m_modulelut_path.c_str());
+ }
+ }
+ }
+ //exit(0);
+ // --- ---
+
+ // --- Create new AM-ssmap
+ //ATH_MSG_INFO("initialize() Make FTKSSMapAM.");
+ FTKSSMap* ssmapAM = new FTKSSMap(rmap, m_ssmapAM_path.c_str(), force_am_hashmap);
+
+ // ftk setup
+
+
+ // --- create FTK_CompressedAMBank
+ //ATH_MSG_INFO("Create FTK_CompressedAMBank");
+ ATH_MSG_INFO(" + default HWMODEID (used if -1 is specified): "
+ +TString::Format("%d",m_hwmodeid_default));
+ ATH_MSG_INFO(" + HWMODEID of input/output pcache DC bank: "
+ +TString::Format("%d",m_hwmodeid_dc));
+ ATH_MSG_INFO(" + HWMODEID of input/output tsp/ccache DC bank: "
+ +TString::Format("%d",m_hwmodeid_tspcc));
+ // FTKPattGenRoot pattgen(pmap,rmap,m_curreg,ssmap,sectorslice,constbank);
+
+ FTK_CompressedAMBank bank(m_curreg,m_iSubReg,ssmapAM,ssmapTSP,
+ m_hwmodeid_tspcc,m_hwmodeid_dc);
+
+ if(bank.getHWModeSS_dc() != bank.getHWModeSS_tsp()) {
+ if(m_sectordefHW0.empty() || m_sectordefHW2.empty()) {
+ ATH_MSG_FATAL("Different HWMODEID for TSP and DC bank but sector definition files not given");
+ } else {
+ bank.readSectorDefinition(m_sectordefHW0.c_str(),m_sectordefHW2.c_str());
+ }
+ }
+ ostringstream msg;
+ msg<<"HWMODEID="<<bank.getHWModeSS_tsp()
+ <<" on TSP level (sectorordered/ccache bank) and HWMODEID="
+ <<bank.getHWModeSS_dc()<<" on DC level (pcache bank)";
+ ATH_MSG_INFO(msg.str().c_str());
+
+ // set TSP import parameters
+ if(m_ndcMax>=0) {
+ bank.setNDCmax(m_ndcMax);
+ }
+ if(m_wildcardPenalty) {
+ bank.setWildcardPenalty(m_wildcardPenalty);
+ }
+ for(size_t plane=0;plane<m_ndcMaxPlane.size();plane++) {
+ bank.setNDCmaxPlane(plane,m_ndcMaxPlane[plane]);
+ }
+ for(size_t plane=0;plane<m_wildcardPenaltyPlane.size();plane++) {
+ bank.setWildcardPenaltyPlane(plane,m_wildcardPenaltyPlane[plane]);
+ }
+
+ // set list of bad modules
+ bank.setBadSSMapPath(m_badmap_path);
+ bank.setBadSSMapPath2(m_badmap_path2);
+
+ if(!m_in_cache_path.empty()) {
+ // read only one subregion (or whatever is in that file)
+ bank.readROOTBankCache(m_in_cache_path.c_str());
+ } else if(!m_partitionList.empty()) {
+ bank.readSectorOrderedBank(m_in_bank_path.c_str(),
+ m_partitionList.c_str(),
+ m_nSubReg,
+ m_nSectorMax,
+ m_nLamb);
+ } else {
+ bank.readSectorOrderedBank(m_in_bank_path.c_str(),
+ m_maxpatt,
+ m_nSubReg,
+ m_nSectorMax,
+ m_nLamb);
+ }
+ if(!m_out_ccache_path.empty())
+ bank.writeCCachedBankFile(m_out_ccache_path.c_str(),m_flatFormat);
+ if(!m_out_pcache_path.empty()) {
+ bank.writePCachedBankFile(m_out_pcache_path.c_str(),m_flatFormat,
+ m_nSubReg,m_nLamb);
+ }
+
+ // Important: 'return' deletes the FTKPattGenRoot object and thus writes the patterns to disk
+ return StatusCode::SUCCESS;
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/FTKConstGenAlgo.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKConstGenAlgo.cxx
new file mode 100644
index 00000000000..39664e44eeb
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKConstGenAlgo.cxx
@@ -0,0 +1,2468 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "TrigFTKBankGen/FTKBankGenAlgo.h"
+#include "TrigFTKBankGen/FTKConstGenAlgo.h"
+#include "TrigFTKBankGen/FTKPattKDTree.h"
+#include "TrigFTKBankGen/atlparslice_root.h"
+
+#include "TrigFTKSim/FTKSetup.h"
+
+#include "GaudiKernel/MsgStream.h"
+
+#include "GaudiKernel/ITHistSvc.h"
+
+#include "TH1.h"
+#include "TFile.h"
+#include "TTree.h"
+#include "TMath.h"
+#include "TROOT.h"
+
+#include <sstream>
+#include <iostream>
+#include <fstream>
+#include <cmath>
+#include <string>
+#include <stdio.h>
+#include <math.h>
+#include <stdlib.h>
+
+#include <TMatrixD.h>
+#include <TVectorD.h>
+#include <TDecompLU.h>
+#define MTX_TOLERANCE 3e-16
+
+geo_constants *geo_const,*gcorth;
+using namespace std;
+
+/////////////////////////////////////////////////////////////////////////////
+FTKConstGenAlgo::FTKConstGenAlgo(const std::string& name, ISvcLocator* pSvcLocator) :
+ AthAlgorithm(name, pSvcLocator),
+ m_merging(false),
+ m_genconst(false),
+ m_subregion(false),
+ m_extract_1stStage(false),
+ m_fpath(0x0),
+ m_outfilename(""),//output file name used for all process
+ m_ITkMode(false),
+ m_allregion(false),//do allregion or not
+ m_region(0),// use if not using all regions
+ m_nsubregion(0),
+ m_nbank(64),// number of total regions
+ m_pmap(0x0),//12L pmap used for extract 1st stage
+ m_pmap_8L(0x0),//8L pmap used for extract 1st stage
+ m_pmap_path(),//12L pmap path used for extract 1st stage
+ m_pmap_8L_path()//8L pmap path used for extract 1st stage
+{
+ declareProperty("file_path",m_fpath,"array of merging files");
+ declareProperty("merged_file_path",m_cfpath,"merged file");
+ declareProperty("gcon_file_path",m_gfpath,"gcon file");
+ declareProperty("sector_file_path",m_sfpath,"sector file");
+ declareProperty("LayerChange_path",m_extractpath,"extract1stStage");
+ declareProperty("pmap_path",m_pmap_path);
+ declareProperty("pmap_8L_path",m_pmap_8L_path);
+ declareProperty("merging",m_merging);
+ declareProperty("genconst",m_genconst);
+ declareProperty("subregion",m_subregion);
+ declareProperty("eightLayer",m_extract_1stStage);
+ declareProperty("ITkMode",m_ITkMode);
+ declareProperty("allregion",m_allregion);
+ declareProperty("region",m_region);
+ declareProperty("nsubregion",m_nsubregion);
+ declareProperty("nbank",m_nbank);
+
+ declareProperty("OutputFileName",m_outfilename);
+}
+
+
+FTKConstGenAlgo::~FTKConstGenAlgo()
+{
+ if (m_pmap) delete m_pmap;
+ if (m_pmap_8L) delete m_pmap_8L;
+}
+
+StatusCode FTKConstGenAlgo::initialize(){
+
+ // toggle ITk geometry (placeholder with no effect as of Jan. 2016)
+ FTKSetup::getFTKSetup().setITkMode( m_ITkMode );
+
+ MsgStream log(msgSvc(), name());
+ log << MSG::INFO << "FTKConstGenAlgo::initialize()" << endmsg;
+
+ // merge
+ if(true==m_merging){
+ log << MSG::INFO << "This job will be merging " <<m_fpath.size() << " files " <<endmsg;
+ merge();
+ }
+
+ // sector/constant calcuration from matrix
+ if(true==m_genconst){
+ log << MSG::INFO << "This job will be accumulating fit constant " <<endmsg;
+ constantgen();
+ }
+
+ // 12L->8L reduction for matrix file
+ if(true==m_extract_1stStage){
+ log << MSG::INFO << "This job will be making 8Layer From 12Layer " <<endmsg;
+
+ // Look for the main plane-map (12L)
+ log << MSG::INFO << "Read the logical layer definitions" << endmsg;
+ if (m_pmap_path.empty()) {
+ log << MSG::FATAL << "Main plane map definition missing" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ else {
+ m_pmap = new FTKPlaneMap(m_pmap_path.c_str());
+ if (!(*m_pmap)) {
+ log << MSG::FATAL << "Error using plane map: " << m_pmap_path << endmsg;
+ return StatusCode::FAILURE;
+ }
+ }
+ // Look for the main plane-map (8L)
+ if (m_pmap_8L_path.empty()) {
+ log << MSG::FATAL << "Main plane map definition missing" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ else {
+ m_pmap_8L = new FTKPlaneMap(m_pmap_8L_path.c_str());
+ if (!(*m_pmap_8L)) {
+ log << MSG::FATAL << "Error using plane map: " << m_pmap_8L_path << endmsg;
+ return StatusCode::FAILURE;
+ }
+ }
+
+ doRelation = false;
+ nplane = m_pmap->getNPlanes();
+ nplane8 = m_pmap_8L->getNPlanes();
+
+ // These 6 counters will evolve in each step of map building
+ // to generalize to 1st/2nd stage extrapolation.
+ endcap_inversion = new bool[12];
+
+ plane_index_1st_stage = 0;
+ plane_index_2nd_stage = 0;
+ coord_index_1st_stage = 0;
+ coord_index_2nd_stage = 0;
+ index_missing_plane = 0;
+ index_missing_coord = 0;
+
+ doInvert = false;
+
+ // select 8L from 12L, and check do endcap inversion or not
+ for(int nlayer=0; nlayer<m_pmap->getNPlanes(); nlayer++){// loop Layer for 2nd stage
+
+ // dimension of this layer (2 for pixel, 1 for SCT). Reading from .pmap file.
+ const int ndimension = m_pmap->getPlane(plane_index_2nd_stage,0).getNDimension();
+
+ // if doRelation is false, the layer is not used for 1st stage
+ doRelation = false;
+ if (plane_index_1st_stage >= nplane8) {
+ doRelation = true;
+ } else if (m_pmap_8L->getPlane(plane_index_1st_stage, 0).getLayer() !=
+ m_pmap ->getPlane(plane_index_2nd_stage, 0).getLayer()
+ ) {
+ doRelation = true;
+ }
+
+ if(doRelation){
+
+ // move the indexes
+ plane_index_2nd_stage += 1;
+ coord_index_2nd_stage += ndimension;
+ index_missing_plane += 1;
+ index_missing_coord += ndimension;
+
+ }else{
+
+ // do Invert in this plane?
+ doInvert = m_pmap->getPlane(plane_index_2nd_stage,0).getNSte() != m_pmap->getPlane(plane_index_2nd_stage,1).getNSte();
+ if (m_pmap->getPlane(plane_index_2nd_stage,0).getNDimension()!=1) doInvert = false;
+
+ endcap_inversion[index_missing_plane] = doInvert;
+
+ // keep values for later use
+ vec_plane_index_1st_stage.push_back(plane_index_1st_stage);
+ vec_plane_index_2nd_stage.push_back(plane_index_2nd_stage);
+ vec_coord_index_1st_stage.push_back(coord_index_1st_stage);
+ vec_coord_index_2nd_stage.push_back(coord_index_2nd_stage);
+ vec_ndimension.push_back(ndimension);
+ vec_doInvert.push_back(doInvert);
+
+ // move the indexes
+ plane_index_1st_stage += 1;
+ coord_index_1st_stage += ndimension;
+ plane_index_2nd_stage += 1;
+ coord_index_2nd_stage += ndimension;
+
+ }//doRelation
+
+ }// loop for 2nd stage layer
+
+ extract_1stStage();
+ }
+
+ // make subregion, currently not used
+ if(true==m_subregion){
+ log << MSG::INFO << "This job will be making subregions from sectors and constants " <<endmsg;
+ make_subregion();
+ }
+ return StatusCode::SUCCESS;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+StatusCode FTKConstGenAlgo::execute() {
+
+ MsgStream log(msgSvc(), name());
+ log << MSG::INFO << "FTKConstGenAlgo::execute() start" << endmsg;
+
+
+ return StatusCode::SUCCESS;
+}
+
+StatusCode FTKConstGenAlgo::finalize() {
+ MsgStream log(msgSvc(), name());
+ log << MSG::INFO << "finalize()" << endmsg;
+
+
+ return StatusCode::SUCCESS;
+}
+
+
+// HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
+// HH the main part of each functions start from here HH
+// HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
+
+void FTKConstGenAlgo::merge()
+{
+ MsgStream log(msgSvc(), name());
+
+ log << MSG::INFO <<" m_path " << m_fpath.size() << endmsg;
+ m_nfile=m_fpath.size();
+
+ //
+ // variables of matrix before merge
+ //
+
+ float nevent = 0;
+ int npatterns=0;
+ int ndim;
+ int ndim2;
+ int *sectorID=NULL;
+ int *hashID=NULL;
+ double *vec=NULL;
+ double tmpC;
+ double tmpD;
+ double tmpPhi;
+ double tmpCoto;
+ double tmpZ;
+ float nhit;
+ double *tmpxC=NULL;
+ double *tmpxD=NULL;
+ double *tmpxPhi=NULL;
+ double *tmpxCoto=NULL;
+ double *tmpxZ=NULL;
+ double *tmpcovx=NULL;
+ ULong64_t m_merged_monval[100]={0};
+ bool monFlag=false;
+
+ std::vector<short >* tmp_intc = new std::vector<short >;
+ std::vector<short >* tmp_intphi = new std::vector<short >;
+ std::vector<short >* tmp_intd0 = new std::vector<short >;
+ std::vector<short >* tmp_intz0 = new std::vector<short >;
+ std::vector<short >* tmp_inteta = new std::vector<short >;
+
+ matrix Mtmp;
+
+ double tmp_cmax;
+ double tmp_cmin;
+ int tmp_cslices;
+
+ double tmp_phimax;
+ double tmp_phimin;
+ int tmp_phislices;
+
+ double tmp_d0max;
+ double tmp_d0min;
+ int tmp_d0slices;
+
+ double tmp_z0max;
+ double tmp_z0min;
+ int tmp_z0slices;
+
+ double tmp_etamax;
+ double tmp_etamin;
+ int tmp_etaslices;
+
+ //
+ // read information from matrix file
+ //
+
+ /* obtain the first valid file to extract some general information
+ * used to intialize the merge structures
+ */
+ string fpath;
+ TFile *file=NULL;
+ int check_file=0;
+
+ while(check_file<m_nfile){ // loop over the files, ends at the first valid file
+ fpath=m_fpath[check_file];
+ file = TFile::Open(fpath.c_str());
+ if(!file){
+ log << MSG::WARNING << fpath.c_str() << " is not found " << endmsg;
+ }else{
+ if(file->GetNkeys()!=0) break;
+ }
+ check_file++;
+ } // end loop over the files
+
+ /* extract the TTree for a reference region, all the values
+ * used in this block are independent
+ */
+ TTree *tree = (TTree*)file->Get(Form("am%d",m_region));
+ TTree *slice_tree = (TTree*)file->Get("slice");
+ if(gROOT->FindObject("montree")){
+ monFlag=true;
+ }
+
+ // extract logical layers related info: total dimenstion and number of logical layers
+ tree->SetBranchAddress("ndim",&ndim);
+ tree->SetBranchAddress("nplanes",&nplane);
+ tree->SetBranchAddress("ndim2",&ndim2);
+ tree->GetEntry(0);
+
+ slice_tree->SetBranchAddress("c_max",&tmp_cmax);
+ slice_tree->SetBranchAddress("c_min", &tmp_cmin);
+ slice_tree->SetBranchAddress("c_slices", &tmp_cslices);
+ slice_tree->SetBranchAddress("phi_max", &tmp_phimax);
+ slice_tree->SetBranchAddress("phi_min", &tmp_phimin);
+ slice_tree->SetBranchAddress("phi_slices", &tmp_phislices);
+ slice_tree->SetBranchAddress("d0_max", &tmp_d0max);
+ slice_tree->SetBranchAddress("d0_min", &tmp_d0min);
+ slice_tree->SetBranchAddress("d0_slices", &tmp_d0slices);
+ slice_tree->SetBranchAddress("z0_max", &tmp_z0max);
+ slice_tree->SetBranchAddress("z0_min", &tmp_z0min);
+ slice_tree->SetBranchAddress("z0_slices", &tmp_z0slices);
+ slice_tree->SetBranchAddress("eta_max", &tmp_etamax);
+ slice_tree->SetBranchAddress("eta_min", &tmp_etamin);
+ slice_tree->SetBranchAddress("eta_slices", &tmp_etaslices);
+ slice_tree->GetEntry(0);
+
+ sectorID = (int *) calloc(nplane+1,sizeof(int));
+ hashID = (int *) calloc(nplane+1,sizeof(int));
+ vec = (double *) calloc(ndim,sizeof(double));
+ tmpxC = (double *) calloc(ndim,sizeof(double));
+ tmpxD = (double *) calloc(ndim,sizeof(double));
+ tmpxPhi = (double *) calloc(ndim,sizeof(double));
+ tmpxCoto = (double *) calloc(ndim,sizeof(double));
+ tmpxZ = (double *) calloc(ndim,sizeof(double));
+ tmpcovx = (double *) calloc(ndim2,sizeof(double));
+
+ // close the temporary file
+ file->Close();
+
+ // setup the boundaries for the merge, it can be a single region or a range
+ // i.e. use all region or one region
+
+ int b_int;
+ int b_end;
+
+ int nbanks;
+ int bank_order;
+ if(true==m_allregion){
+ b_int=0;
+ b_end=m_nbank;
+ }else{
+ b_int=m_region;
+ b_end=m_region+1;
+ }
+
+ nbanks = b_end - b_int;
+ initPattTree(nbanks, nplane+1,ndim);
+
+ for(int i=0;i<m_nfile;i++){ // loop over the input files
+ const string &fpath = m_fpath[i];
+ log << MSG::INFO <<" m_file " << i << endmsg;
+
+ TFile *mfile = TFile::Open(fpath.c_str());
+ gROOT->cd();
+
+ // check if the file is valid, if not move to the next
+ if(!mfile){
+ log << MSG::WARNING << fpath.c_str() << " is not found " << endmsg;
+ mfile->Close();
+ continue;
+ }
+ else if(mfile->GetNkeys()==0){
+ log << MSG::WARNING << " This file has not keys " << i << endmsg;
+ mfile->Close();
+ continue;
+ }
+
+ for(int b=b_int;b<b_end;b++) { // loop over the towers
+
+ // get the tree for the specific bank
+ TTree *am_tree = (TTree*)mfile->Get(Form("am%d",b));
+
+ // extract the number of events and connect the branches
+ nevent =am_tree->GetEntries();
+ am_tree->SetBranchAddress("sectorID",sectorID);
+ am_tree->SetBranchAddress("hashID",hashID);
+ am_tree->SetBranchAddress("tmpC",&tmpC);
+ am_tree->SetBranchAddress("tmpD",&tmpD);
+ am_tree->SetBranchAddress("tmpPhi",&tmpPhi);
+ am_tree->SetBranchAddress("tmpCoto",&tmpCoto);
+ am_tree->SetBranchAddress("tmpZ",&tmpZ);
+ am_tree->SetBranchAddress("nhit",&nhit);
+ am_tree->SetBranchAddress("Vec",vec);
+ am_tree->SetBranchAddress("tmpxC", tmpxC);
+ am_tree->SetBranchAddress("tmpxD", tmpxD);
+ am_tree->SetBranchAddress("tmpxPhi", tmpxPhi);
+ am_tree->SetBranchAddress("tmpxCoto", tmpxCoto);
+ am_tree->SetBranchAddress("tmpxZ", tmpxZ);
+ am_tree->SetBranchAddress("tmpcovx", tmpcovx);
+
+ am_tree->SetBranchAddress("tmpintc", &tmp_intc);
+ am_tree->SetBranchAddress("tmpintphi", &tmp_intphi);
+ am_tree->SetBranchAddress("tmpintd0", &tmp_intd0);
+ am_tree->SetBranchAddress("tmpintz0", &tmp_intz0);
+ am_tree->SetBranchAddress("tmpinteta", &tmp_inteta);
+
+ // check the number of sectors analyzed
+ nsector = nsector+nevent;
+
+ for(int j=0;j<nevent;j++){ // event loop
+ // load the current entry
+ am_tree->GetEntry(j);
+ Mtmp.C=tmpC, Mtmp.D=tmpD, Mtmp.Phi=tmpPhi;
+ Mtmp.Coto=tmpCoto, Mtmp.Z=tmpZ,Mtmp.nhit=nhit;
+
+ sectorID[nplane] = 0;//for sector, we set it to zero.
+ hashID[nplane] = 0;//for sector, we set it to zero.
+
+ bank_order = b - b_int;
+ addPattReturnCode=addKDPattern(bank_order,false,sectorID,hashID,1,Mtmp,vec,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ tmp_intc[0],tmp_intphi[0],tmp_intd0[0],tmp_intz0[0],tmp_inteta[0]);
+
+ // new pattern found
+ if(1==addPattReturnCode){
+ ++npatterns;
+ }
+ } // end event loop
+
+ // close current file
+ delete am_tree;
+ am_tree=NULL;
+ } // end bank loop
+
+ if(monFlag){
+ TTree *m_montree = (TTree *)mfile->Get("montree");
+ ULong64_t m_monval[100]={0};
+ m_montree->SetBranchAddress("monval", m_monval);
+ m_montree->GetEntry(0);
+ for(int ibin=0;ibin<100;ibin++){
+ m_merged_monval[ibin] += m_monval[ibin];
+ }// for ibin
+ delete m_montree;
+ m_montree=NULL;
+ }
+
+ // close current file
+ mfile->Close();
+ delete mfile;
+ mfile=NULL;
+ } // end loop over the files
+
+ free(sectorID);
+ free(hashID);
+ free(vec);
+ free(tmpxC);
+ free(tmpxD);
+ free(tmpxPhi);
+ free(tmpxCoto);
+ free(tmpxZ);
+ free(tmpcovx);
+
+ ////////////////////////////////////////////////////////////
+ ////// create new file merged some files
+ ///////////////////////////////////////////////////////////
+
+ //
+ // variables for merged matrix file
+ //
+
+ int *mergeSec=NULL;
+ int *mergehashID=NULL;
+ double *mergevec=NULL;
+ double mergeC;
+ double mergeD;
+ double mergePhi;
+ double mergeCoto;
+ double mergeZ;
+ float mergenhit;
+
+ double *mergexC=NULL;
+ double *mergexD=NULL;
+ double *mergexPhi=NULL;
+ double *mergexCoto=NULL;
+ double *mergexZ=NULL;
+ double *mergecovx=NULL;
+
+ TTree *m_tree=NULL;
+ TTree *m_mergeslice=NULL;
+ TTree *m_merged_montree=0;
+ if(monFlag){
+ m_merged_montree = new TTree("montree", "monitor tree");
+ m_merged_montree->Branch("monval", m_merged_monval, "m_monval[100]/l");
+ m_merged_montree->Fill();
+ }
+
+ m_mergeslice=new TTree("slice", "slice para");
+
+ mergeSec = (int *) calloc(nplane,sizeof(int));
+ mergehashID = (int *) calloc(nplane,sizeof(int));
+ mergevec = (double *) calloc(ndim,sizeof(double));
+ mergexC = (double *) calloc(ndim,sizeof(double));
+ mergexD = (double *) calloc(ndim,sizeof(double));
+ mergexPhi = (double *) calloc(ndim,sizeof(double));
+ mergexCoto = (double *) calloc(ndim,sizeof(double));
+ mergexZ = (double *) calloc(ndim,sizeof(double));
+ mergecovx = (double *) calloc(ndim2,sizeof(double));
+
+ // define output file
+ if (m_outfilename.size()==0) {
+ // if the output file is not specified the name is built according a specific conention
+ char filename[40];
+ if(true==m_allregion){
+ sprintf(filename,"matrix_%dL_%dDim_regall.root",nplane,ndim);
+ }else{
+ sprintf(filename,"matrix_%dL_%dDim_reg%d.root",nplane,ndim,m_region);
+ }
+ m_outfilename = filename;
+ }
+
+ // open the output file for the merged matrixes
+ file = TFile::Open(m_outfilename.c_str(),"recreate");
+
+ char name[5];
+ char mtitle[20];
+
+ m_mergeslice->Branch("c_max",&tmp_cmax);
+ m_mergeslice->Branch("phi_max",&tmp_phimax);
+ m_mergeslice->Branch("d0_max",&tmp_d0max);
+ m_mergeslice->Branch("z0_max",&tmp_z0max);
+ m_mergeslice->Branch("eta_max",&tmp_etamax);
+
+ m_mergeslice->Branch("c_min",&tmp_cmin);
+ m_mergeslice->Branch("phi_min",&tmp_phimin);
+ m_mergeslice->Branch("d0_min",&tmp_d0min);
+ m_mergeslice->Branch("z0_min",&tmp_z0min);
+ m_mergeslice->Branch("eta_min",&tmp_etamin);
+
+ m_mergeslice->Branch("c_slices",&tmp_cslices);
+ m_mergeslice->Branch("phi_slices",&tmp_phislices);
+ m_mergeslice->Branch("d0_slices",&tmp_d0slices);
+ m_mergeslice->Branch("z0_slices",&tmp_z0slices);
+ m_mergeslice->Branch("eta_slices",&tmp_etaslices);
+ m_mergeslice->Fill();
+ m_mergeslice->Write();
+
+ if(monFlag){
+ m_merged_montree->Write();
+ }
+
+ gROOT->cd();
+
+ //
+ // define branch name of merged matrix file, and fill
+ //
+
+ for(int b=b_int;b<b_end;b++){
+ sprintf(name,"am%d",b);
+ sprintf(mtitle,"Ambank %d para",b);
+
+ m_tree = new TTree(name, mtitle);
+
+ m_tree->Branch("ndim",&ndim,"ndim/I");
+ m_tree->Branch("ndim2",&ndim2,"ndim2/I");
+ m_tree->Branch("Vec", mergevec,"Vec[ndim]/D");
+ m_tree->Branch("nplanes",&nplane,"nplanes/I");
+ m_tree->Branch("sectorID", mergeSec,"sectorID[nplanes]/I");
+ m_tree->Branch("hashID", mergehashID,"hashID[nplanes]/I");
+ m_tree->Branch("nhit", &mergenhit,"nhit/F");
+ m_tree->Branch("tmpC", &mergeC,"tmpC/D");
+ m_tree->Branch("tmpD", &mergeD,"tmpD/D");
+ m_tree->Branch("tmpPhi", &mergePhi,"tmpPhi/D");
+ m_tree->Branch("tmpCoto", &mergeCoto,"tmpCoto/D");
+ m_tree->Branch("tmpZ", &mergeZ,"tmpZ/D");
+ m_tree->Branch("tmpxC", mergexC,"tmpxC[ndim]/D");
+ m_tree->Branch("tmpxD", mergexD,"tmpxD[ndim]/D");
+ m_tree->Branch("tmpxPhi", mergexPhi,"tmpxPhi[ndim]/D");
+ m_tree->Branch("tmpxCoto", mergexCoto,"tmpxCoto[ndim]/D");
+ m_tree->Branch("tmpxZ", mergexZ,"tmpxZ[ndim]/D");
+ m_tree->Branch("tmpcovx", mergecovx,"tmpcovx[ndim2]/D");
+
+ m_mergeintc= new std::vector<short>;
+ m_mergeintphi= new std::vector<short>;
+ m_mergeintd0= new std::vector<short>;
+ m_mergeintz0= new std::vector<short>;
+ m_mergeinteta= new std::vector<short>;
+
+ m_tree->Branch("tmpintc", &m_mergeintc);
+ m_tree->Branch("tmpintphi", &m_mergeintphi);
+ m_tree->Branch("tmpintd0", &m_mergeintd0);
+ m_tree->Branch("tmpintz0", &m_mergeintz0);
+ m_tree->Branch("tmpinteta", &m_mergeinteta);
+
+ bank_order = b - b_int;
+
+ sortMPatterns(bank_order);
+
+ for(int i=0; i<getNPatterns(bank_order);i++){
+ m_mergeintc->clear();
+ m_mergeintphi->clear();
+ m_mergeintd0->clear();
+ m_mergeintz0->clear();
+ m_mergeinteta->clear();
+
+ log << MSG::INFO <<"sector ";
+ for(int k=0;k<nplane;k++){
+ mergeSec[k]=getPatternSS(bank_order,i,k);
+ mergehashID[k]=getPatthashID(bank_order,i,k);
+ log <<getPatternSS(bank_order,i,k)<<" ";//tmp out
+ }
+ log <<" "<<getPattnhit(bank_order,i) <<endmsg;//tmp out
+ mergenhit=getPattnhit(bank_order,i);
+ mergeC=getPattC(bank_order,i);
+ mergeD=getPattD(bank_order,i);
+ mergePhi=getPattPhi(bank_order,i);
+ mergeCoto=getPattCoto(bank_order,i);
+ mergeZ=getPattZ(bank_order,i);
+ for(int k=0;k<ndim;k++){
+ mergevec[k]=getPatthitc(bank_order,i,k);
+ mergexC[k]=getPattxC(bank_order,i,k);
+ mergexD[k]=getPattxD(bank_order,i,k);
+ mergexPhi[k]=getPattxPhi(bank_order,i,k);
+ mergexCoto[k]=getPattxCoto(bank_order,i,k);
+ mergexZ[k]=getPattxZ(bank_order,i,k);
+ for(int l=0;l<ndim;l++){
+ mergecovx[k*ndim+l]=getPattcovx(bank_order,i,k*ndim+l);
+ log << MSG::DEBUG <<" i= " << k*ndim+l <<"bank= "<< mergecovx[k*ndim+l] <<endmsg;
+ }
+ log <<getPatthitc(bank_order,i,k)<<" ";
+ }
+
+ log <<" "<<endmsg;
+
+ for(int m=0;m<mergenhit;m++){
+ m_mergeintc->push_back(getPattintc(bank_order,i,m));
+ m_mergeintphi->push_back(getPattintphi(bank_order,i,m));
+ m_mergeintd0->push_back(getPattintd0(bank_order,i,m));
+ m_mergeintz0->push_back(getPattintz0(bank_order,i,m));
+ m_mergeinteta->push_back(getPattinteta(bank_order,i,m));
+
+ }
+
+ m_tree->Fill();
+ }
+
+ file->cd();
+ m_tree->Write();
+ gROOT->cd();
+
+ delete m_tree;
+ m_tree=NULL;
+ }
+
+ free(mergeSec);
+ free(mergehashID);
+ free(mergevec);
+ free(mergexC);
+ free(mergexD);
+ free(mergexPhi);
+ free(mergexCoto);
+ free(mergexZ);
+ free(mergecovx);
+
+ file->Close();
+ delete file;
+ file=NULL;
+}
+
+void FTKConstGenAlgo::constantgen()
+{
+ MsgStream log(msgSvc(), name());
+
+ //
+ // variables of matrix before merge
+ //
+
+ int ndim,tmp_ndim;
+ int nplane,tmp_nplane;
+ double *sum_Vec;
+ int *sum_Sec;
+ int *sum_Hash;
+ double sum_C;
+ double sum_D;
+ double sum_Phi;
+ double sum_Coto;
+ double sum_Z;
+ float sum_nhit;
+ char region[5];
+ int nsector;
+ TTree *const_tree;
+ double *sum_xC;
+ double *sum_xD;
+ double *sum_xPhi;
+ double *sum_xCoto;
+ double *sum_xZ;
+ double **sum_covx;
+ double *sum_covx_i;
+ double *sum_covx_v;
+ double **ccopy;
+ double *eigval;
+ double *ccopy_v;
+ double **eigvec;
+ double *eigvec_v;
+ int nconst=0;
+
+ //slice file
+ int nslices[5];
+ double minvals[5];
+ double maxvals[5];
+ char s_filename[40];
+ bool monFlag=false;
+
+ std::vector<short >* sum_intc = new std::vector<short >;
+ std::vector<short >* sum_intphi = new std::vector<short >;
+ std::vector<short >* sum_intd0 = new std::vector<short >;
+ std::vector<short >* sum_intz0 = new std::vector<short >;
+ std::vector<short >* sum_inteta = new std::vector<short >;
+
+ //
+ // get information from input matrix file
+ //
+
+ sprintf(region,"am%d",m_region);
+ // open the file with the matrix files after the merging
+ TFile *mafile = 0x0;
+ if (m_merging) {
+ // if the merging was executed within this session the file was
+ // created in the ::merge() routine according the specific flags
+ mafile = TFile::Open(m_outfilename.c_str());
+ }
+ else {
+ // if the merging was executed in a previous step the matrix files
+ // is passed using the m_cfpath variable, controlled by JO
+ mafile = TFile::Open(m_cfpath.c_str());
+ }
+ gROOT->cd();
+
+ TTree *mslice_tree = (TTree*)mafile->Get("slice");
+ const_tree = (TTree*)mafile->Get(region);
+ nsector =const_tree->GetEntries();
+
+
+ if(gROOT->FindObject("montree")){
+ monFlag=true;
+ }
+
+ TTree *m_montree=NULL;
+ if(monFlag){
+ TTree *m_montree_org = (TTree *)mafile->Get("montree");
+ m_montree_org->SetName("montree_org");
+ m_montree = m_montree_org->CloneTree();
+ m_montree->SetName("montree");
+ delete m_montree_org;
+ m_montree_org=NULL;
+ }
+
+ const_tree->SetBranchAddress("ndim",&tmp_ndim);
+ const_tree->SetBranchAddress("nplanes",&tmp_nplane);
+ const_tree->GetEntry(0);
+ ndim = tmp_ndim;
+ nplane = tmp_nplane;
+
+ sum_Sec = (int *) calloc(nplane,sizeof(int));
+ sum_Hash = (int *) calloc(nplane,sizeof(int));
+ sum_Vec = (double *) calloc(ndim,sizeof(double));
+ sum_xC = (double *) calloc(ndim,sizeof(double));
+ sum_xD = (double *) calloc(ndim,sizeof(double));
+ sum_xPhi = (double *) calloc(ndim,sizeof(double));
+ sum_xCoto = (double *) calloc(ndim,sizeof(double));
+ sum_xZ = (double *) calloc(ndim,sizeof(double));
+ sum_covx_i = (double *) calloc(ndim*ndim,sizeof(double));
+
+ const_tree->SetBranchAddress("sectorID",sum_Sec);
+ const_tree->SetBranchAddress("hashID",sum_Hash);
+ const_tree->SetBranchAddress("tmpC",&sum_C);
+ const_tree->SetBranchAddress("tmpD",&sum_D);
+ const_tree->SetBranchAddress("tmpPhi",&sum_Phi);
+ const_tree->SetBranchAddress("tmpCoto",&sum_Coto);
+ const_tree->SetBranchAddress("tmpZ",&sum_Z);
+ const_tree->SetBranchAddress("nhit",&sum_nhit);
+ const_tree->SetBranchAddress("Vec",sum_Vec);
+ const_tree->SetBranchAddress("tmpxC", sum_xC);
+ const_tree->SetBranchAddress("tmpxD", sum_xD);
+ const_tree->SetBranchAddress("tmpxPhi", sum_xPhi);
+ const_tree->SetBranchAddress("tmpxCoto", sum_xCoto);
+ const_tree->SetBranchAddress("tmpxZ", sum_xZ);
+ const_tree->SetBranchAddress("tmpcovx", sum_covx_i);
+
+ const_tree->SetBranchAddress("tmpintc", &sum_intc);
+ const_tree->SetBranchAddress("tmpintphi", &sum_intphi);
+ const_tree->SetBranchAddress("tmpintd0", &sum_intd0);
+ const_tree->SetBranchAddress("tmpintz0", &sum_intz0);
+ const_tree->SetBranchAddress("tmpinteta", &sum_inteta);
+
+ mslice_tree->SetBranchAddress("c_max",&maxvals[0]);
+ mslice_tree->SetBranchAddress("c_min", &minvals[0]);
+ mslice_tree->SetBranchAddress("c_slices", &nslices[0]);
+ mslice_tree->SetBranchAddress("d0_max", &maxvals[1]);
+ mslice_tree->SetBranchAddress("d0_min", &minvals[1]);
+ mslice_tree->SetBranchAddress("d0_slices", &nslices[1]);
+ mslice_tree->SetBranchAddress("phi_max", &maxvals[2]);
+ mslice_tree->SetBranchAddress("phi_min", &minvals[2]);
+ mslice_tree->SetBranchAddress("phi_slices", &nslices[2]);
+ mslice_tree->SetBranchAddress("z0_max", &maxvals[3]);
+ mslice_tree->SetBranchAddress("z0_min", &minvals[3]);
+ mslice_tree->SetBranchAddress("z0_slices", &nslices[3]);
+ mslice_tree->SetBranchAddress("eta_max", &maxvals[4]);
+ mslice_tree->SetBranchAddress("eta_min", &minvals[4]);
+ mslice_tree->SetBranchAddress("eta_slices", &nslices[4]);
+
+ mslice_tree->GetEntry(0);
+
+ eigval = (double *) calloc(ndim,sizeof(double));
+ ccopy_v = (double *) calloc(ndim*ndim,sizeof(double));
+ eigvec_v = (double *) calloc(ndim*ndim,sizeof(double));
+ sum_covx_v = (double *) calloc(ndim*ndim,sizeof(double));
+ ccopy = (double **) malloc(ndim*sizeof(double*));
+ eigvec = (double **) malloc(ndim*sizeof(double*));
+ sum_covx = (double **) malloc(ndim*sizeof(double*));
+
+ for(int i=0;i<ndim;++i){
+ sum_covx[i] =(double *) calloc(ndim,sizeof(double));
+ ccopy[i] =(double *) calloc(ndim,sizeof(double));
+ eigvec[i] =(double *) calloc(ndim,sizeof(double));
+ sum_covx[i] = &sum_covx_v[ndim*i];
+ ccopy[i]= &ccopy_v[ndim*i];
+ eigvec[i]= &eigvec_v[ndim*i];
+ }
+
+ geo_const =(struct geo_constants *) malloc(nsector*sizeof(struct geo_constants));
+ gcorth =(struct geo_constants *) malloc(nsector*sizeof(struct geo_constants));
+
+ for(int i=0;i<nsector;i++){
+ geo_const[i].Vd = (double *) calloc(ndim,sizeof(double));
+ geo_const[i].Vc = (double *) calloc(ndim,sizeof(double));
+ geo_const[i].Vf = (double *) calloc(ndim,sizeof(double));
+ geo_const[i].Vz0 = (double *) calloc(ndim,sizeof(double));
+ geo_const[i].Vo = (double *) calloc(ndim,sizeof(double));
+ geo_const[i].kernel = (double **) malloc((ndim-NPARS)*sizeof(double *));
+ gcorth[i].Vd = (double *) malloc(ndim*sizeof(double));
+ gcorth[i].Vc = (double *) malloc(ndim*sizeof(double));
+ gcorth[i].Vf = (double *) malloc(ndim*sizeof(double));
+ gcorth[i].Vz0 = (double *) malloc(ndim*sizeof(double));
+ gcorth[i].Vo = (double *) malloc(ndim*sizeof(double));
+ gcorth[i].kernel = (double **) malloc((ndim-NPARS)*sizeof(double *));
+ geo_const[i].kaverages = (double *) calloc((ndim-NPARS),sizeof(double));
+ gcorth[i].kaverages = (double *) calloc((ndim-NPARS),sizeof(double));
+ for(int j=0;j<ndim-NPARS;j++){
+ geo_const[i].kernel[j] = (double *) calloc(ndim,sizeof(double));
+ gcorth[i].kernel[j] = (double *) calloc(ndim,sizeof(double));
+
+ }
+ }
+
+ minvals[4]=sinh(minvals[4]);
+ maxvals[4]=sinh(maxvals[4]);
+ maxvals[2]= maxvals[2]*M_PI;
+ minvals[2]= minvals[2]*M_PI;
+
+ double resolutions[14] = {0.04, 0.08265625, 0.04, 0.08265625, 0.04, 0.08265625, 0.04515625, 0.04515625, 0.04515625, 0.04515625, 0.04515625, 0.04515625, 0.04515625, 0.04515625};
+#ifdef DEBUG_NOISE
+ float n[30];
+#endif
+
+ int nkernel=(ndim-NPARS)*ndim;
+ int nkaverages=ndim-NPARS;
+ int ndim2=ndim*ndim;
+ char filename[40];
+ char name[5];
+ char title[20];
+ double Cd,Cc,Cf,Cz0,Co;
+ double *Vc,*Vd,*Vf,*Vz0,*Vo;
+ double *kernel,*kaverages;
+
+ Vc = (double *) calloc(ndim,sizeof(double));
+ Vd = (double *) calloc(ndim,sizeof(double));
+ Vf = (double *) calloc(ndim,sizeof(double));
+ Vz0 = (double *) calloc(ndim,sizeof(double));
+ Vo = (double *) calloc(ndim,sizeof(double));
+
+ kernel = (double *) calloc(ndim*(ndim-NPARS),sizeof(double));
+ kaverages = (double *) calloc((ndim-NPARS),sizeof(double));
+
+ ///////// root file part
+
+ sprintf(filename,"const_%dL_%dDim_reg%d.root",nplane,ndim,m_region);
+ cfile = new TFile(filename,"recreate");
+ gROOT->cd();
+
+ sprintf(name,"Am%d",m_region);
+ sprintf(title,"Ambank %d const",m_region);
+ m_ctree = new TTree(name, title);
+
+ m_ctree->Branch("ndim",&ndim,"ndim/I");
+ m_ctree->Branch("ndim2",&ndim2,"ndim2/I");
+ m_ctree->Branch("nkernel",&nkernel,"nkernel/I");
+ m_ctree->Branch("nkaverages",&nkaverages,"nkaverages/I");
+ m_ctree->Branch("nplane",&nplane,"nplane/I");
+ m_ctree->Branch("sectorID",sum_Sec,"m_sectorID[nplane]/I");
+ m_ctree->Branch("hashID",sum_Hash,"m_hashID[nplane]/I");
+ m_ctree->Branch("nhit",&sum_nhit,"nhit/F");
+ m_ctree->Branch("Cd", &Cd,"Cd/D");
+ m_ctree->Branch("Cc", &Cc,"Cc/D");
+ m_ctree->Branch("Cf", &Cf,"Cf/D");
+ m_ctree->Branch("Cz0", &Cz0,"Cz0/D");
+ m_ctree->Branch("Co", &Co,"Co/D");
+ m_ctree->Branch("Vc",Vc,"Vc[ndim]/D");
+ m_ctree->Branch("Vd",Vd,"Vd[ndim]/D");
+ m_ctree->Branch("Vf",Vf,"Vf[ndim]/D");
+ m_ctree->Branch("Vz0",Vz0,"Vz0[ndim]/D");
+ m_ctree->Branch("Vo",Vo,"Vo[ndim]/D");
+ m_ctree->Branch("kernel",kernel,"kernel[nkernel]/D");
+ m_ctree->Branch("kaverages",kaverages,"kaverages[nkaverages]/D");
+
+
+ //
+ // keep matrix information with "good" sectors to extract 8L from this matrix file
+ //
+
+ // matrix files with good sectors
+ TTree *m_good_tree=NULL;
+ TTree *m_good_slice=NULL;
+
+ double good_C;
+ double good_D;
+ double good_Phi;
+ double good_Coto;
+ double good_Z;
+
+ double *good_Vec;
+ double *good_xC;
+ double *good_xD;
+ double *good_xPhi;
+ double *good_xCoto;
+ double *good_xZ;
+ double *good_covx_i;
+
+ good_Vec = (double *) calloc(ndim,sizeof(double));
+ good_xC = (double *) calloc(ndim,sizeof(double));
+ good_xD = (double *) calloc(ndim,sizeof(double));
+ good_xPhi = (double *) calloc(ndim,sizeof(double));
+ good_xCoto = (double *) calloc(ndim,sizeof(double));
+ good_xZ = (double *) calloc(ndim,sizeof(double));
+ good_covx_i = (double *) calloc(ndim*ndim,sizeof(double));
+
+
+ if (m_outfilename.size()==0) {
+ // if the output file is not specified the name is built according a specific conention
+ char filename[40];
+ if(true==m_allregion){
+ sprintf(filename,"good_matrix_%dL_%dDim_regall.root",nplane,ndim);
+ }else{
+ sprintf(filename,"good_matrix_%dL_%dDim_reg%d.root",nplane,ndim,m_region);
+ }
+ m_outfilename = filename;
+ }
+
+ // open the output file for the good matrixes
+ good_file = TFile::Open(m_outfilename.c_str(),"recreate");
+ gROOT->cd();
+
+ m_good_slice=new TTree("slice", "slice para");
+
+ m_good_slice->Branch("c_max",&maxvals[0]);
+ m_good_slice->Branch("d0_max",&maxvals[1]);
+ m_good_slice->Branch("phi_max",&maxvals[2]);
+ m_good_slice->Branch("z0_max",&maxvals[3]);
+ m_good_slice->Branch("eta_max",&maxvals[4]);
+
+ m_good_slice->Branch("c_min",&minvals[0]);
+ m_good_slice->Branch("d0_min",&minvals[1]);
+ m_good_slice->Branch("phi_min",&minvals[2]);
+ m_good_slice->Branch("z0_min",&minvals[3]);
+ m_good_slice->Branch("eta_min",&minvals[4]);
+
+ m_good_slice->Branch("c_slices",&nslices[0]);
+ m_good_slice->Branch("d0_slices",&nslices[1]);
+ m_good_slice->Branch("phi_slices",&nslices[2]);
+ m_good_slice->Branch("z0_slices",&nslices[3]);
+ m_good_slice->Branch("eta_slices",&nslices[4]);
+
+ m_good_slice->Fill();
+
+ good_file->cd();
+ m_good_slice->Write();
+ if(monFlag){
+ m_montree->Write();
+ }
+ gROOT->cd();
+
+ sprintf(name,"am%d",m_region);
+ sprintf(title,"Ambank %d para",m_region);
+
+ m_good_tree = new TTree(name, title);
+
+ m_good_tree->Branch("ndim",&ndim,"ndim/I");
+ m_good_tree->Branch("ndim2",&ndim2,"ndim2/I");
+ m_good_tree->Branch("Vec", good_Vec,"Vec[ndim]/D");
+ m_good_tree->Branch("nplanes",&nplane,"nplanes/I");
+ m_good_tree->Branch("sectorID", sum_Sec,"sectorID[nplanes]/I");
+ m_good_tree->Branch("hashID", sum_Hash,"hashID[nplanes]/I");
+ m_good_tree->Branch("nhit", &sum_nhit,"nhit/F");
+ m_good_tree->Branch("tmpC", &good_C,"tmpC/D");
+ m_good_tree->Branch("tmpD", &good_D,"tmpD/D");
+ m_good_tree->Branch("tmpPhi", &good_Phi,"tmpPhi/D");
+ m_good_tree->Branch("tmpCoto", &good_Coto,"tmpCoto/D");
+ m_good_tree->Branch("tmpZ", &good_Z,"tmpZ/D");
+ m_good_tree->Branch("tmpxC", good_xC,"tmpxC[ndim]/D");
+ m_good_tree->Branch("tmpxD", good_xD,"tmpxD[ndim]/D");
+ m_good_tree->Branch("tmpxPhi", good_xPhi,"tmpxPhi[ndim]/D");
+ m_good_tree->Branch("tmpxCoto", good_xCoto,"tmpxCoto[ndim]/D");
+ m_good_tree->Branch("tmpxZ", good_xZ,"tmpxZ[ndim]/D");
+ m_good_tree->Branch("tmpcovx", good_covx_i,"tmpcovx[ndim2]/D");
+
+ m_good_tree->Branch("tmpintc", &sum_intc);
+ m_good_tree->Branch("tmpintphi", &sum_intphi);
+ m_good_tree->Branch("tmpintd0", &sum_intd0);
+ m_good_tree->Branch("tmpintz0", &sum_intz0);
+ m_good_tree->Branch("tmpinteta", &sum_inteta);
+
+ //
+ // calcurate constants start
+ //
+
+ for(int sector=0;sector<nsector;sector++){
+
+ const_tree->GetEntry(sector);
+
+ // keep original values before calcuration for "good" matrix
+ good_C = sum_C;
+ good_D = sum_D;
+ good_Phi = sum_Phi;
+ good_Coto = sum_Coto;
+ good_Z = sum_Z;
+
+ for(int i=0;i<ndim;++i){
+ good_Vec[i]= sum_Vec[i];
+ good_xC[i] = sum_xC[i];
+ good_xD[i] = sum_xD[i];
+ good_xPhi[i] = sum_xPhi[i];
+ good_xCoto[i] = sum_xCoto[i];
+ good_xZ[i] = sum_xZ[i];
+
+ for(int j=0;j<ndim;++j){
+ good_covx_i[ndim*i+j]=sum_covx_i[ndim*i+j];
+ }
+
+ }
+
+ for(int i=0;i<ndim;++i){
+ for(int j=0;j<ndim;++j){
+ sum_covx[i][j]=sum_covx_i[ndim*i+j];
+ }
+ }
+
+ // don't leave unitialized variables
+ // fill of zero, matrix ad vector
+
+ if ( sum_nhit<15/*MIN_TRACK_SEC*/) {
+ // puts("Not enough tracks!");
+ nullifyConstants(sector,ndim);
+ continue;
+ } // end insufficient track case
+
+ //////////////////////////////////////////////////////
+ /// renormalize and diagonalize correlation matrixes and vector,
+ /// for all sector
+ //////////////////////////////////////////////////////
+
+ sum_C /= sum_nhit;
+ sum_D /= sum_nhit;
+ sum_Phi /= sum_nhit;
+ sum_Coto /= sum_nhit;
+ sum_Z /= sum_nhit;
+
+ for (int i=0 ; i<ndim ; ++i ) {
+ sum_Vec[i] /= sum_nhit;
+ }
+ // traslate parameters
+
+ for (int i=0;i<ndim;++i) {
+ sum_xC[i] = (sum_xC[i]-sum_Vec[i]*sum_C*sum_nhit)/(sum_nhit-1);
+ sum_xD[i] =(sum_xD[i]-sum_Vec[i]*sum_D*sum_nhit)/(sum_nhit-1);
+ sum_xPhi[i] =(sum_xPhi[i]-sum_Vec[i]*sum_Phi*sum_nhit)/(sum_nhit-1);
+ sum_xZ[i] = (sum_xZ[i]-sum_Vec[i]*sum_Z*sum_nhit)/(sum_nhit-1);
+ sum_xCoto[i] =(sum_xCoto[i]-sum_Vec[i]*sum_Coto*sum_nhit)/(sum_nhit-1);
+
+ // symmetrize
+
+ for (int j=i;j<ndim;++j) {
+ ccopy[j][i] = ccopy[i][j] =
+ sum_covx[j][i] = sum_covx[i][j] =
+ (sum_covx[i][j]-sum_Vec[i]*sum_Vec[j]*sum_nhit)/(sum_nhit-1);
+ }
+ }
+
+ //FlagAK - covering the case when matrix is singular (i.e., if linearity is too good due to small # of tracks)
+ if(mtx_eigen(ndim,sum_covx_v,eigval,eigvec_v)==-1 || mtx_invert(ndim,ccopy_v)==-1) {
+ log << MSG::INFO <<" sector " << sector << endmsg;
+ puts("Failed matrix operations!");
+ nullifyConstants(sector,ndim);
+ continue;
+ }
+
+ // Get the "noise" contribution
+ // Diagonal resolutions:
+ for(int i=0;i<ndim;i++) {
+ double noise_i = 0;
+ for(int j=0;j<ndim;j++){
+ noise_i += eigvec[i][j] * resolutions[j] * eigvec[i][j];
+ }
+#ifdef DEBUG_NOISE
+ n[16+i] = noise_i;
+ //printf("% 8f ",noise_i);
+#endif
+ }
+
+ sigmad(geo_const[sector].Vc/*,sum_covx*/,ccopy,sum_xC,ndim);
+ sigmad(geo_const[sector].Vd/*,sum_covx*/,ccopy,sum_xD,ndim);
+ sigmad(geo_const[sector].Vf/*,sum_covx*/,ccopy,sum_xPhi,ndim);
+ sigmad(geo_const[sector].Vz0/*,sum_covx*/,ccopy,sum_xZ,ndim);
+ sigmad(geo_const[sector].Vo/*,sum_covx*/,ccopy,sum_xCoto,ndim);
+
+ for(int i=0;i<ndim-NPARS;i++) for(int j=0;j<ndim;j++)
+ geo_const[sector].kernel[i][j] = eigvec[i][j];
+
+ for(int i=0;i<ndim-NPARS;i++)
+ geo_const[sector].kaverages[i] = 0;
+
+ for(int i=0;i<ndim-NPARS;i++) {
+ for(int j=0;j<ndim;j++){
+ geo_const[sector].kernel[i][j] = eigvec[i][j]/sqrt(eigval[i]);
+ }
+ }
+
+ for(int i=0;i<ndim-NPARS;i++) for(int j=0;j<ndim;j++)
+ geo_const[sector].kaverages[i] +=
+ -geo_const[sector].kernel[i][j]*sum_Vec[j];
+
+ geo_const[sector].Cd = sum_D;
+ geo_const[sector].Cc = sum_C;
+ geo_const[sector].Cf = sum_Phi;
+ geo_const[sector].Cz0 = sum_Z;
+ geo_const[sector].Co = sum_Coto;
+
+ for(int i=0;i<ndim;i++)
+ geo_const[sector].Cd += -geo_const[sector].Vd[i]*sum_Vec[i];
+
+ for(int i=0;i<ndim;i++)
+ geo_const[sector].Cc += -geo_const[sector].Vc[i]*sum_Vec[i];
+
+ for(int i=0;i<ndim;i++)
+ geo_const[sector].Cf += -geo_const[sector].Vf[i]*sum_Vec[i];
+
+ for(int i=0;i<ndim;i++)
+ geo_const[sector].Cz0 += -geo_const[sector].Vz0[i]*sum_Vec[i];
+
+ for(int i=0;i<ndim;i++)
+ geo_const[sector].Co += -geo_const[sector].Vo[i]*sum_Vec[i];
+
+ geo_const[sector].real = sum_nhit; // valid set of contants
+
+ //now orthogonalize
+
+#define gc (geo_const[sector])
+#define gco (gcorth[sector])
+
+ for(int j=0;j<ndim;j++) {
+ gco.Vd[j] = gc.Vd[j];
+ gco.Vc[j] = gc.Vc[j];
+ gco.Vf[j] = gc.Vf[j];
+ gco.Vz0[j] = gc.Vz0[j];
+ gco.Vo[j] = gc.Vo[j];
+ }
+
+ gco.Cd = gc.Cd; gco.Cc = gc.Cc; gco.Cf = gc.Cf;
+ gco.Co = gc.Co; gco.Cz0 = gc.Cz0;
+ gco.real = gc.real;
+
+ for(int i=0;i<ndim-NPARS;i++) {
+ pr = proj(gc.Vd,gc.kernel[i],ndim)/proj(gc.kernel[i],gc.kernel[i],ndim);
+ for(int j=0;j<ndim;j++) gco.Vd[j] += -gc.kernel[i][j]*pr;
+ gco.Cd += -gc.kaverages[i]*pr;
+
+ pr = proj(gc.Vc,gc.kernel[i],ndim)/proj(gc.kernel[i],gc.kernel[i],ndim);
+ for(int j=0;j<ndim;j++) gco.Vc[j] += - gc.kernel[i][j]*pr;
+ gco.Cc += -gc.kaverages[i]*pr;
+
+ pr = proj(gc.Vf,gc.kernel[i],ndim)/proj(gc.kernel[i],gc.kernel[i],ndim);
+ for(int j=0;j<ndim;j++) gco.Vf[j] += -gc.kernel[i][j]*pr;
+ gco.Cf += -gc.kaverages[i]*pr;
+
+ pr = proj(gc.Vz0,gc.kernel[i],ndim)/proj(gc.kernel[i],gc.kernel[i],ndim);
+ for(int j=0;j<ndim;j++) gco.Vz0[j] += -gc.kernel[i][j]*pr;
+ gco.Cz0 += -gc.kaverages[i]*pr;
+
+ pr = proj(gc.Vo,gc.kernel[i],ndim)/proj(gc.kernel[i],gc.kernel[i],ndim);
+ for(int j=0;j<ndim;j++) gco.Vo[j] += -gc.kernel[i][j]*pr;
+ gco.Co += -gc.kaverages[i]*pr;
+
+
+ // Copy the kernel
+ for(int j=0;j<ndim;j++) gco.kernel[i][j] = gc.kernel[i][j];
+ gco.kaverages[i] = gc.kaverages[i];
+ }
+
+ // FlagAK - final check to make sure the constants have no "nan" values
+ if(failedConstants(sector,ndim)) {
+ log << MSG::INFO <<" sector " << sector << endmsg;
+ puts("Found nans in final writeout!");
+ nullifyConstants(sector,ndim);
+ continue;
+ }
+ else {
+
+ Cc=geo_const[sector].Cc;
+ Cd=geo_const[sector].Cd;
+ Cf=geo_const[sector].Cf;
+ Cz0=geo_const[sector].Cz0;
+ Co=geo_const[sector].Co;
+
+ for(int i=0;i<ndim;i++){
+ Vc[i]=geo_const[sector].Vc[i];
+ Vd[i]=geo_const[sector].Vd[i];
+ Vf[i]=geo_const[sector].Vf[i];
+ Vz0[i]=geo_const[sector].Vz0[i];
+ Vo[i]=geo_const[sector].Vo[i];
+ }
+ for(int i=0;i<ndim-NPARS;i++){
+ kaverages[i]=geo_const[sector].kaverages[i];
+ }
+
+ for(int i=0;i<ndim-NPARS;i++){
+ for(int j=0;j<ndim;j++){
+ kernel[i*ndim+j]=geo_const[sector].kernel[i][j];
+ }
+ }
+ m_ctree->Fill();
+ nconst++;
+
+ //fill matrix
+ m_good_tree->Fill();
+
+ // Record information on eigenvalues and noise
+#ifdef DEBUG_NOISE
+ n[0] = sector;
+ n[1] = sum_nhit;
+ n[2] = eigval[0];
+ n[3] = eigval[1];
+ n[4] = eigval[2];
+ n[5] = eigval[3];
+ n[6] = eigval[4];
+ n[7] = eigval[5];
+ n[8] = eigval[6];
+ n[9] = eigval[7];
+ n[10] = eigval[8];
+ n[11] = eigval[9];
+ n[12] = eigval[10];
+ n[13] = eigval[11];
+ n[14] = eigval[12];
+ n[15] = eigval[13];
+ // n[16] - n[29] recorded above for noise
+#endif
+ }
+
+ }// for sector
+
+ //
+ // for good matrix
+ //
+
+ good_file->cd();
+ m_good_tree->Write();
+ gROOT->cd();
+
+ delete m_good_tree;
+ m_good_tree=NULL;
+
+ //
+ // const.root
+ //
+ cfile->cd();
+ m_ctree->Write();
+ gROOT->cd();
+ cfile->Close();
+
+
+ ////// ASCII file part (.gcon and .patt)
+ FILE *sector_file;
+ FILE *sectorHW_file;
+ FILE *const_file;
+ char sector_filename[40];
+ char sectorHW_filename[40];
+ char const_filename[40];
+ int nconst1=0;
+
+ //slice file
+ initNSlices(1,nslices,minvals,maxvals);
+ initSlices(0,nconst);
+
+ // slice file
+
+ sprintf(const_filename,"corrgen_raw_%dL_reg%d.gcon",nplane,m_region);
+ sprintf(sector_filename,"sectors_raw_%dL_reg%d.patt",nplane,m_region);
+ sprintf(sectorHW_filename,"sectorsHW_raw_%dL_reg%d.patt",nplane,m_region);
+ sector_file = fopen(sector_filename,"w");
+ sectorHW_file = fopen(sectorHW_filename,"w");
+ const_file = fopen(const_filename,"w");
+
+ fprintf(const_file,"! *** RECONSTRUCTION GEOMETRY CONSTANTS ***\n");
+ fprintf(const_file,"\n");
+ fprintf(const_file,"Version 2 ! File format version number\n");
+ fprintf(const_file,"\n");
+ fprintf(const_file,"! *** PHI is now in GLOBAL coordinate system ***\n");
+ fprintf(const_file," NPLANES\n");
+ fprintf(const_file," %d\n",nplane);
+ fprintf(const_file," NSECTORS\n");
+ fprintf(const_file,"%d\n",nconst);
+ fprintf(const_file," NDIM\n");
+ fprintf(const_file," 2\n");
+
+ fprintf(sector_file,"%d %d\n",nconst,nplane);
+ fprintf(sectorHW_file,"%d %d\n",nconst,nplane);
+
+ for(int sector=0;sector<nsector;sector++){
+ const_tree->GetEntry(sector);
+ if(geo_const[sector].Cc!=0){
+
+ // sector file
+ fprintf(sector_file,"%d ",nconst1);
+ fprintf(sectorHW_file,"%d ",nconst1);
+ for(int i=0;i<nplane;i++){
+ fprintf(sector_file,"%d ",sum_Sec[i]);
+ fprintf(sectorHW_file,"%d ",sum_Hash[i]);
+ }
+ int nhit=sum_nhit;
+ fprintf(sector_file,"0 %d",nhit);
+ fprintf(sector_file,"\n");
+ fprintf(sectorHW_file,"0 %d",nhit);
+ fprintf(sectorHW_file,"\n");
+ // sector file
+
+ //gcon file
+
+ fprintf(const_file,"sector\n");
+ fprintf(const_file,"%d\n",nconst1);
+
+ fprintf(const_file," Vc \n");
+ for(int i=0;i<ndim;i++){
+ fprintf(const_file,"%e\n",geo_const[sector].Vc[i]);
+ }
+
+ fprintf(const_file," Vd \n");
+ for(int i=0;i<ndim;i++){
+ fprintf(const_file,"%e\n",geo_const[sector].Vd[i]);
+ }
+
+ fprintf(const_file," Vf \n");
+ for(int i=0;i<ndim;i++){
+ fprintf(const_file,"%e\n",geo_const[sector].Vf[i]);
+ }
+
+ fprintf(const_file," Vz0 \n");
+ for(int i=0;i<ndim;i++){
+ fprintf(const_file,"%e\n",geo_const[sector].Vz0[i]);
+ }
+
+ fprintf(const_file," Vo \n");
+ for(int i=0;i<ndim;i++){
+ fprintf(const_file,"%e\n",geo_const[sector].Vo[i]);
+ }
+
+ fprintf(const_file,"kaverages\n");
+ for(int i=0;i<ndim-NPARS;i++){
+ fprintf(const_file,"%e\n",geo_const[sector].kaverages[i]);
+ }
+
+ fprintf(const_file,"kernel\n");
+ for(int i=0;i<ndim-NPARS;i++){
+ for(int j=0;j<ndim;j++){
+ fprintf(const_file,"%e\n",geo_const[sector].kernel[i][j]);
+ }
+ }
+
+ fprintf(const_file,"Cc\n");
+ fprintf(const_file,"%e\n",geo_const[sector].Cc);
+
+ fprintf(const_file,"Cd\n");
+ fprintf(const_file,"%e\n",geo_const[sector].Cd);
+
+ fprintf(const_file,"Cf\n");
+ fprintf(const_file,"%e\n",geo_const[sector].Cf);
+
+ fprintf(const_file,"Cz0\n");
+ fprintf(const_file,"%e\n",geo_const[sector].Cz0);
+
+ fprintf(const_file,"Co\n");
+ fprintf(const_file,"%e\n",geo_const[sector].Co);
+ //gcon file
+
+ for(int i=0;i<nhit;i++){
+ addSectorToSlice(0,nconst1,sum_intc[0][i],sum_intd0[0][i],sum_intphi[0][i],sum_intz0[0][i],sum_inteta[0][i]);
+ }
+ nconst1++;
+ }//Cc!=0
+ }//sector loop
+
+ mafile->Close();
+ fclose(sector_file);
+ fclose(sectorHW_file);
+ fclose(const_file);
+
+ sprintf(s_filename,"slices_%dL_reg%d.root",nplane,m_region);
+ saveSlices(0,s_filename);
+ //////ASCII file part
+ for (int i=0;i<nsector;++i) {
+
+ for (int j=0;j<ndim-NPARS;++j) {
+ free(geo_const[i].kernel[j]);
+ free(gcorth[i].kernel[j]);
+ }
+ // free arrays of array
+ free(geo_const[i].kernel);
+ free(geo_const[i].Vc);
+ free(geo_const[i].Vd);
+ free(geo_const[i].Vf);
+ free(geo_const[i].Vz0);
+ free(geo_const[i].Vo);
+
+ free(gcorth[i].kernel);
+ free(gcorth[i].Vc);
+ free(gcorth[i].Vd);
+ free(gcorth[i].Vf);
+ free(gcorth[i].Vz0);
+ free(gcorth[i].Vo);
+
+ free(geo_const[i].kaverages);
+ free(gcorth[i].kaverages);
+
+ }
+
+}//const gen
+
+
+/** Extract a reduce set of constants from sectors built using
+ * more modules
+ */
+void FTKConstGenAlgo::extract_1stStage()
+{
+ MsgStream log(msgSvc(), name());
+
+ // retrieve the original file
+ TFile *Lfile = TFile::Open(m_extractpath.c_str(),"");
+ // retrieve the TTree for the slices and the information on the sectors
+ TTree *tree = (TTree*)Lfile->Get(Form("am%d",m_region));
+ TTree *slice_tree = (TTree*) Lfile->Get("slice");
+
+ for(int idx=0; idx<(int)vec_plane_index_2nd_stage.size(); idx++){
+ log << MSG::INFO <<"2nd stage layer :" << vec_plane_index_2nd_stage[idx] << ", 1st stage layer: "<< vec_plane_index_1st_stage[idx] << ", doInvert: " << vec_doInvert[idx] << ", coord 2nd stage: " << vec_coord_index_2nd_stage[idx] << ", coord 1st stage: " << vec_coord_index_1st_stage[idx] << endmsg;
+ }
+
+ // prepare the pointers to retrieve the data from the TTrees
+ int nevent;
+ int npatterns=0;
+ int ndim;
+ int nth_dim = 0;
+ int nth_dim2 = 0;
+ int ndim2;
+ int *sectorID;
+ int *hashID;
+ double *vec;
+ double tmpC;
+ double tmpD;
+ double tmpPhi;
+ double tmpCoto;
+ double tmpZ;
+ float nhit;
+ double *tmpxC;
+ double *tmpxD;
+ double *tmpxPhi;
+ double *tmpxCoto;
+ double *tmpxZ;
+ double *tmpcovx;
+
+ int ndim8 = 11;
+ int ndim2_8 = 11*11;
+ int nth_dim8 = 0;
+ int nth_dim8_2 = 0;
+ int idx_cov8 = 0;
+ int *sectorID8;
+ int *hashID8;
+ double *vec8;
+ double *tmpxC8;
+ double *tmpxD8;
+ double *tmpxPhi8;
+ double *tmpxCoto8;
+ double *tmpxZ8;
+ double *tmpcovx8;
+
+ std::vector<short >* tmp_intc = new std::vector<short >;
+ std::vector<short >* tmp_intphi = new std::vector<short >;
+ std::vector<short >* tmp_intd0 = new std::vector<short >;
+ std::vector<short >* tmp_intz0 = new std::vector<short >;
+ std::vector<short >* tmp_inteta = new std::vector<short >;
+
+ matrix Mtmp;
+
+ double tmp_cmax;
+ double tmp_cmin;
+ int tmp_cslices;
+
+ double tmp_phimax;
+ double tmp_phimin;
+ int tmp_phislices;
+
+ double tmp_d0max;
+ double tmp_d0min;
+ int tmp_d0slices;
+
+ double tmp_z0max;
+ double tmp_z0min;
+ int tmp_z0slices;
+
+ double tmp_etamax;
+ double tmp_etamin;
+ int tmp_etaslices;
+
+ //
+ // read matrix file
+ //
+
+ tree->SetBranchAddress("ndim",&ndim);
+ tree->SetBranchAddress("nplanes",&nplane);
+ tree->SetBranchAddress("ndim2",&ndim2);
+ tree->GetEntry(0);
+
+ slice_tree->SetBranchAddress("c_max",&tmp_cmax);
+ slice_tree->SetBranchAddress("c_min", &tmp_cmin);
+ slice_tree->SetBranchAddress("c_slices", &tmp_cslices);
+ slice_tree->SetBranchAddress("phi_max", &tmp_phimax);
+ slice_tree->SetBranchAddress("phi_min", &tmp_phimin);
+ slice_tree->SetBranchAddress("phi_slices", &tmp_phislices);
+ slice_tree->SetBranchAddress("d0_max", &tmp_d0max);
+ slice_tree->SetBranchAddress("d0_min", &tmp_d0min);
+ slice_tree->SetBranchAddress("d0_slices", &tmp_d0slices);
+ slice_tree->SetBranchAddress("z0_max", &tmp_z0max);
+ slice_tree->SetBranchAddress("z0_min", &tmp_z0min);
+ slice_tree->SetBranchAddress("z0_slices", &tmp_z0slices);
+ slice_tree->SetBranchAddress("eta_max", &tmp_etamax);
+ slice_tree->SetBranchAddress("eta_min", &tmp_etamin);
+ slice_tree->SetBranchAddress("eta_slices", &tmp_etaslices);
+ slice_tree->GetEntry(0);
+
+ sectorID = (int *) calloc(nplane+1,sizeof(int));
+ hashID = (int *) calloc(nplane+1,sizeof(int));
+ vec = (double *) calloc(ndim,sizeof(double));
+ tmpxC = (double *) calloc(ndim,sizeof(double));
+ tmpxD = (double *) calloc(ndim,sizeof(double));
+ tmpxPhi = (double *) calloc(ndim,sizeof(double));
+ tmpxCoto = (double *) calloc(ndim,sizeof(double));
+ tmpxZ = (double *) calloc(ndim,sizeof(double));
+ tmpcovx = (double *) calloc(ndim2,sizeof(double));
+
+ sectorID8 = (int *) calloc(nplane8+1,sizeof(int));
+ hashID8 = (int *) calloc(nplane8+1,sizeof(int));
+ vec8 = (double *) calloc(ndim8,sizeof(double));
+ tmpxC8 = (double *) calloc(ndim8,sizeof(double));
+ tmpxD8 = (double *) calloc(ndim8,sizeof(double));
+ tmpxPhi8 = (double *) calloc(ndim8,sizeof(double));
+ tmpxCoto8 = (double *) calloc(ndim8,sizeof(double));
+ tmpxZ8 = (double *) calloc(ndim8,sizeof(double));
+ tmpcovx8 = (double *) calloc(ndim8*ndim8,sizeof(double));
+
+ // setup the boundaries for the merge, it can be a single region or a range
+ int b_int;
+ int b_end;
+
+ int bank_order;
+ if(true==m_allregion){
+ b_int=0;
+ b_end=m_nbank;
+ }else{
+ b_int=m_region;
+ b_end=m_region+1;
+ }
+
+ initPattTree(m_nbank,nplane8+1,ndim8); //(nregions, nplane+1, ndim)
+
+ for(int b=b_int;b<b_end;b++) { // loop over the banks
+
+ TTree *am_tree = (TTree*)Lfile->Get(Form("am%d",b));
+
+ nevent =am_tree->GetEntries();
+ am_tree->SetBranchAddress("sectorID",sectorID);
+ am_tree->SetBranchAddress("hashID",hashID);
+ am_tree->SetBranchAddress("tmpC",&tmpC);
+ am_tree->SetBranchAddress("tmpD",&tmpD);
+ am_tree->SetBranchAddress("tmpPhi",&tmpPhi);
+ am_tree->SetBranchAddress("tmpCoto",&tmpCoto);
+ am_tree->SetBranchAddress("tmpZ",&tmpZ);
+ am_tree->SetBranchAddress("nhit",&nhit);
+ am_tree->SetBranchAddress("Vec",vec);
+ am_tree->SetBranchAddress("tmpxC", tmpxC);
+ am_tree->SetBranchAddress("tmpxD", tmpxD);
+ am_tree->SetBranchAddress("tmpxPhi", tmpxPhi);
+ am_tree->SetBranchAddress("tmpxCoto", tmpxCoto);
+ am_tree->SetBranchAddress("tmpxZ", tmpxZ);
+ am_tree->SetBranchAddress("tmpcovx", tmpcovx);
+
+ am_tree->SetBranchAddress("tmpintc", &tmp_intc);
+ am_tree->SetBranchAddress("tmpintphi", &tmp_intphi);
+ am_tree->SetBranchAddress("tmpintd0", &tmp_intd0);
+ am_tree->SetBranchAddress("tmpintz0", &tmp_intz0);
+ am_tree->SetBranchAddress("tmpinteta", &tmp_inteta);
+
+ log << MSG::INFO << " region: " << b << ", nevent: " << nevent <<endmsg;
+
+ //
+ // extract 8L from 12L
+ //
+
+ for(int j=0;j<nevent;j++){ // event loop
+
+ am_tree->GetEntry(j);
+ Mtmp.C=tmpC, Mtmp.D=tmpD, Mtmp.Phi=tmpPhi;
+ Mtmp.Coto=tmpCoto, Mtmp.Z=tmpZ,Mtmp.nhit=nhit;
+
+ // check if the module belongs to endcap (for endcap inversion.).
+ bool isEndcap[12]={0};
+
+ for(int plane_idx_2nd_stage = 0;plane_idx_2nd_stage<nplane;plane_idx_2nd_stage++){
+ if(sectorID[plane_idx_2nd_stage]%1000>20) isEndcap[plane_idx_2nd_stage]=true;
+ }
+
+ // main function extract 1st stage (8L) from 2nd stage (12L)
+ for(int idx_layer=0; idx_layer<(int)vec_plane_index_2nd_stage.size(); idx_layer++){
+
+ if(vec_doInvert[idx_layer] && isEndcap[vec_plane_index_2nd_stage[idx_layer]]){// if endcap and SCT layer
+
+ // stereo or axial
+ if(vec_plane_index_2nd_stage[idx_layer] % 2 == 0) inversion = 1;
+ else inversion = -1;
+
+ }else{// if no inversion
+ inversion = 0;
+ }// endcap inversion
+
+ sectorID8[idx_layer] = sectorID[vec_plane_index_2nd_stage[idx_layer] + inversion];
+ hashID8[idx_layer] = hashID[vec_plane_index_2nd_stage[idx_layer] + inversion];
+
+ for(int ndm=0; ndm<vec_ndimension[idx_layer]; ndm++){// pixel:2, SCT:1
+
+ nth_dim = vec_coord_index_2nd_stage[idx_layer] + ndm;
+ nth_dim8 = vec_coord_index_1st_stage[idx_layer] + ndm;
+
+ vec8[nth_dim8] = vec[nth_dim + inversion];
+ tmpxC8[nth_dim8] = tmpxC[nth_dim + inversion];
+ tmpxD8[nth_dim8] = tmpxD[nth_dim + inversion];
+ tmpxPhi8[nth_dim8] = tmpxPhi[nth_dim + inversion];
+ tmpxCoto8[nth_dim8] = tmpxCoto[nth_dim + inversion];
+ tmpxZ8[nth_dim8] = tmpxZ[nth_dim + inversion];
+
+ // tmpcovx culcuration
+ for(int idx2_layer=0; idx2_layer<(int)vec_plane_index_2nd_stage.size(); idx2_layer++){
+ for(int ndm2=0; ndm2<vec_ndimension[idx2_layer]; ndm2++){
+
+ if(vec_doInvert[idx2_layer] && isEndcap[vec_plane_index_2nd_stage[idx2_layer]]){//if endcap and SCT layer
+
+ // stereo or axial
+ if(vec_plane_index_2nd_stage[idx2_layer] % 2 == 0) inversion2 = 1;
+ else inversion2 = -1;
+
+ }else{// if no inversion
+ inversion2 = 0;
+ }// endcap inversion
+
+ nth_dim2 = vec_coord_index_2nd_stage[idx2_layer] + ndm2;
+ nth_dim8_2 = vec_coord_index_1st_stage[idx2_layer] + ndm2;
+
+ idx_cov8 = (nth_dim8) * ndim8 + nth_dim8_2;//11*x + y
+
+ if(nth_dim8>nth_dim8_2){//make triangle
+ tmpcovx8[idx_cov8] = 0;
+ }else{
+ tmpcovx8[idx_cov8] = tmpcovx[(nth_dim + inversion) * ndim + nth_dim2 + inversion2];
+ }// nth_dim8 < 7
+
+ }// dimension loop 2
+ }// layer loop 2
+ // tmpcovx culc end
+
+ }// dimension loop
+
+ }// layer loop
+
+ sectorID8[8] = 0;//for sector, we set it to zero
+ hashID8[8] = 0;//for sector, we set it to zero
+ bank_order = b - b_int;
+
+ addPattReturnCode=addKDPattern(bank_order,false,sectorID8,hashID8,1,Mtmp,vec8,tmpxC8,tmpxD8,tmpxPhi8,tmpxCoto8,tmpxZ8,tmpcovx8,
+ tmp_intc[0],tmp_intphi[0],tmp_intd0[0],tmp_intz0[0],tmp_inteta[0]);
+
+ if(1==addPattReturnCode){
+ ++npatterns;
+ }
+
+ }// end of event loop
+ }// end of bank loop
+
+ Lfile->Close();
+
+ free(sectorID);
+ free(hashID);
+ free(vec);
+ free(tmpxC);
+ free(tmpxD);
+ free(tmpxPhi);
+ free(tmpxCoto);
+ free(tmpxZ);
+ free(tmpcovx);
+
+ //
+ // create new file of 8L extracted from 12L
+ //
+
+ ndim2_8=ndim8*ndim8;
+ int *extract_Sec;
+ int *extract_hash;
+ double *extract_vec;
+ double extract_C;
+ double extract_D;
+ double extract_Phi;
+ double extract_Coto;
+ double extract_Z;
+ float extract_nhit;
+
+ double *extract_xC=NULL;
+ double *extract_xD=NULL;
+ double *extract_xPhi=NULL;
+ double *extract_xCoto=NULL;
+ double *extract_xZ=NULL;
+ double *extract_covx=NULL;
+
+ TTree *m_tree=NULL;
+ TTree *m_extract_slice=NULL;
+
+ m_extract_slice=new TTree("slice", "slice para");
+
+ extract_Sec = (int *) calloc(nplane8,sizeof(int));
+ extract_hash = (int *) calloc(nplane8,sizeof(int));
+ extract_vec = (double *) calloc(ndim8,sizeof(double));
+ extract_xC = (double *) calloc(ndim8,sizeof(double));
+ extract_xD = (double *) calloc(ndim8,sizeof(double));
+ extract_xPhi = (double *) calloc(ndim8,sizeof(double));
+ extract_xCoto = (double *) calloc(ndim8,sizeof(double));
+ extract_xZ = (double *) calloc(ndim8,sizeof(double));
+ extract_covx = (double *) calloc(ndim8*ndim8,sizeof(double));
+
+ // define output file
+ if (m_outfilename.size()==0) {
+ char filename[40];
+ if(true==m_allregion){
+ sprintf(filename,"matrix_%dL_%dDim_regall.root",nplane8,ndim8);
+ }else{
+ sprintf(filename,"matrix_%dL_%dDim_reg%d.root",nplane8,ndim8,m_region);
+ }
+ Lfile = new TFile(filename,"recreate");
+ }
+ else {
+ Lfile = TFile::Open(m_outfilename.c_str(),"recreate");
+ }
+
+ char name[5];
+ char mtitle[20];
+
+ m_extract_slice->Branch("c_max",&tmp_cmax);
+ m_extract_slice->Branch("phi_max",&tmp_phimax);
+ m_extract_slice->Branch("d0_max",&tmp_d0max);
+ m_extract_slice->Branch("z0_max",&tmp_z0max);
+ m_extract_slice->Branch("eta_max",&tmp_etamax);
+
+ m_extract_slice->Branch("c_min",&tmp_cmin);
+ m_extract_slice->Branch("phi_min",&tmp_phimin);
+ m_extract_slice->Branch("d0_min",&tmp_d0min);
+ m_extract_slice->Branch("z0_min",&tmp_z0min);
+ m_extract_slice->Branch("eta_min",&tmp_etamin);
+
+ m_extract_slice->Branch("c_slices",&tmp_cslices);
+ m_extract_slice->Branch("phi_slices",&tmp_phislices);
+ m_extract_slice->Branch("d0_slices",&tmp_d0slices);
+ m_extract_slice->Branch("z0_slices",&tmp_z0slices);
+ m_extract_slice->Branch("eta_slices",&tmp_etaslices);
+ m_extract_slice->Fill();
+ m_extract_slice->Write();
+
+ //
+ // define 8L matrix branch, sort by ntracks, and fill
+ //
+
+ for(int b=b_int;b<b_end;b++){
+ sprintf(name,"am%d",b);
+ sprintf(mtitle,"Ambank %d para",b);
+
+ m_tree = new TTree(name, mtitle);
+
+ m_tree->Branch("ndim",&ndim8,"ndim8/I");
+ m_tree->Branch("ndim2",&ndim2_8,"ndim2_8/I");
+ m_tree->Branch("Vec", extract_vec,"Vec[ndim8]/D");
+ m_tree->Branch("nplanes",&nplane8,"nplanes/I");
+ m_tree->Branch("sectorID", extract_Sec, "sectorID[nplanes]/I");
+ m_tree->Branch("hashID", extract_hash, "hashID[nplanes]/I");
+ m_tree->Branch("nhit", &extract_nhit,"nhit/F");
+ m_tree->Branch("tmpC", &extract_C,"tmpC/D");
+ m_tree->Branch("tmpD", &extract_D,"tmpD/D");
+ m_tree->Branch("tmpPhi", &extract_Phi,"tmpPhi/D");
+ m_tree->Branch("tmpCoto", &extract_Coto,"tmpCoto/D");
+ m_tree->Branch("tmpZ", &extract_Z,"tmpZ/D");
+ m_tree->Branch("tmpxC", extract_xC,"tmpxC[ndim8]/D");
+ m_tree->Branch("tmpxD", extract_xD,"tmpxD[ndim8]/D");
+ m_tree->Branch("tmpxPhi", extract_xPhi,"tmpxPhi[ndim8]/D");
+ m_tree->Branch("tmpxCoto", extract_xCoto,"tmpxCoto[ndim8]/D");
+ m_tree->Branch("tmpxZ", extract_xZ,"tmpxZ[ndim8]/D");
+ m_tree->Branch("tmpcovx", extract_covx,"tmpcovx[ndim2_8]/D");
+
+ m_extract_intc= new std::vector<short>;
+ m_extract_intphi= new std::vector<short>;
+ m_extract_intd0= new std::vector<short>;
+ m_extract_intz0= new std::vector<short>;
+ m_extract_inteta= new std::vector<short>;
+
+ m_tree->Branch("tmpintc", &m_extract_intc);
+ m_tree->Branch("tmpintphi", &m_extract_intphi);
+ m_tree->Branch("tmpintd0", &m_extract_intd0);
+ m_tree->Branch("tmpintz0", &m_extract_intz0);
+ m_tree->Branch("tmpinteta", &m_extract_inteta);
+
+ bank_order = b - b_int;
+
+ sortMPatterns(bank_order);
+
+ log << MSG::INFO <<"nsector "<< getNPatterns(bank_order) <<endmsg;
+ for(int i=0; i<getNPatterns(bank_order);i++){
+ m_extract_intc->clear();
+ m_extract_intphi->clear();
+ m_extract_intd0->clear();
+ m_extract_intz0->clear();
+ m_extract_inteta->clear();
+
+ log << MSG::INFO <<"sector ";
+ for(int k=0;k<nplane8;k++){
+ extract_Sec[k]=getPatternSS(bank_order,i,k);
+ extract_hash[k]=getPatthashID(bank_order,i,k);
+ log <<getPatternSS(bank_order,i,k)<<" ";
+ }
+ log <<" "<<getPattnhit(bank_order,i) <<endmsg;
+ extract_nhit=getPattnhit(bank_order,i);
+ extract_C=getPattC(bank_order,i);
+ extract_D=getPattD(bank_order,i);
+ extract_Phi=getPattPhi(bank_order,i);
+ extract_Coto=getPattCoto(bank_order,i);
+ extract_Z=getPattZ(bank_order,i);
+ for(int k=0;k<ndim8;k++){
+ extract_vec[k]=getPatthitc(bank_order,i,k);
+ extract_xC[k]=getPattxC(bank_order,i,k);
+ extract_xD[k]=getPattxD(bank_order,i,k);
+ extract_xPhi[k]=getPattxPhi(bank_order,i,k);
+ extract_xCoto[k]=getPattxCoto(bank_order,i,k);
+ extract_xZ[k]=getPattxZ(bank_order,i,k);
+ for(int l=0;l<ndim8;l++){
+ extract_covx[k*ndim8+l]=getPattcovx(bank_order,i,k*ndim8+l);
+ log << MSG::DEBUG <<" i= " << k*ndim8+l <<"bank= "<< extract_covx[k*ndim8+l] <<endmsg;
+ }
+ log <<getPatthitc(bank_order,i,k)<<" ";
+ }
+
+ log <<" "<<endmsg;
+
+ for(int m=0;m<extract_nhit;m++){
+ m_extract_intc->push_back(getPattintc(bank_order,i,m));
+ m_extract_intphi->push_back(getPattintphi(bank_order,i,m));
+ m_extract_intd0->push_back(getPattintd0(bank_order,i,m));
+ m_extract_intz0->push_back(getPattintz0(bank_order,i,m));
+ m_extract_inteta->push_back(getPattinteta(bank_order,i,m));
+ }
+
+ // fill the output TTree after the reduce information has been informed
+ m_tree->Fill();
+ }
+ // save the result in the output TTree
+ Lfile->cd();
+ m_tree->Write();
+ gROOT->cd();
+
+ delete m_tree;
+ m_tree=NULL;
+ }// loop over regions
+
+ free(extract_Sec);
+ free(extract_hash);
+ free(extract_vec);
+ free(extract_xC);
+ free(extract_xD);
+ free(extract_xPhi);
+ free(extract_xCoto);
+ free(extract_xZ);
+ free(extract_covx);
+}
+
+void FTKConstGenAlgo::make_subregion()
+{
+ MsgStream log(msgSvc(), name());
+
+ char **sector_filename;
+ char **gcon_filename;
+ FILE *sector_file;
+ FILE *gcon_file;
+
+ sector_filename = (char **) malloc(m_nsubregion*sizeof(char*));
+ gcon_filename = (char **) malloc(m_nsubregion*sizeof(char*));
+ for(int i=0;i<m_nsubregion;i++){
+ sector_filename[i] = (char *) calloc(50,sizeof(char));
+ gcon_filename[i] = (char *) calloc(50,sizeof(char));
+ }
+
+ // sector file
+
+ for(unsigned int i=0;i<m_sfpath.size();i++){
+ int nlayer;
+ int nsector;
+ int **sector;
+ int *ntrack;
+ int brank;
+ int sectorID;
+
+ const string &sfpath = m_sfpath[i];
+ ifstream slice_file(sfpath.c_str());
+
+ slice_file >>nsector;
+ log << MSG::INFO <<" nsector = " << nsector << endmsg;
+
+ slice_file >>nlayer;
+ log << MSG::INFO <<" nlayer = " << nlayer << endmsg;
+ sector = (int **) malloc(nsector*sizeof(int*));
+ ntrack=(int *) calloc(nsector,sizeof(int));
+
+ for(int id=0;id<nsector;id++){
+ sector[id] =(int *) calloc(nlayer,sizeof(int));
+ }
+
+ for(int id=0;id<nsector;id++){
+ slice_file >> sectorID;
+ if(id!=sectorID){log << MSG::FATAL <<" This file is bad format " << sfpath.c_str() << endmsg;}else{
+ for(int layer=0;layer<nlayer;layer++){
+ slice_file >> sector[id][layer];
+ }
+ slice_file >>brank;
+ slice_file>>ntrack[id];
+ }
+
+ }
+
+ for(int sub=0;sub<m_nsubregion;sub++){
+ int sub_nsector;
+ sub_nsector=nsector/m_nsubregion;
+ if(sub<nsector%m_nsubregion){
+ sub_nsector=sub_nsector+1;
+ }
+
+ sprintf(sector_filename[sub],"sectors_raw_%dL_%dM_reg%d_sub%d.patt",nlayer,m_nsubregion,i,sub);
+ sector_file = fopen(sector_filename[sub],"w");
+ fprintf(sector_file,"%d %d\n",sub_nsector,nlayer);
+
+ for(int id=0;id<sub_nsector;id++){
+ fprintf(sector_file,"%d ",id);
+ for(int layer=0;layer<nlayer;layer++){
+ fprintf(sector_file,"%d ", sector[id*m_nsubregion+sub][layer]);
+ }
+ fprintf(sector_file,"0 %d",ntrack[id*m_nsubregion+sub]);
+ fprintf(sector_file,"\n");
+ }
+
+ }//for subregion
+ }// for region
+
+ //sector file
+ //gcon file
+
+ for(unsigned int i=0;i<m_gfpath.size();i++){
+ int nlayer;
+ int nsector;
+ int ndim=0,NDIM;
+ int *sectorID;
+ string tmp_e;
+ string identifier;
+ geo_constants *tmp_const;
+ const string &gfpath = m_gfpath[i];
+ ifstream slice_file(gfpath.c_str());
+
+ string init_line[10];
+ for(int j=0;j<6;j++){
+ getline(slice_file, init_line[j]);
+ }
+ slice_file>>nlayer;
+ getline(slice_file, init_line[6]);
+ getline(slice_file, init_line[6]);
+ slice_file>>nsector;
+ getline(slice_file, init_line[7]);
+ getline(slice_file, init_line[7]);
+ slice_file>>NDIM;
+ getline(slice_file, init_line[8]);
+
+ if(nlayer==11 || nlayer==8) ndim=nlayer+3;//w/o IBL or 1st stage
+ else if(nlayer==12) ndim=nlayer+4;//IBL
+
+ tmp_const =(struct geo_constants *) malloc(nsector*sizeof(struct geo_constants));
+ sectorID=(int *) calloc(nsector,sizeof(int));
+ for(int j=0;j<nsector;j++){
+ tmp_const[j].Vd = (double *) calloc(ndim,sizeof(double));
+ tmp_const[j].Vc = (double *) calloc(ndim,sizeof(double));
+ tmp_const[j].Vf = (double *) calloc(ndim,sizeof(double));
+ tmp_const[j].Vz0 = (double *) calloc(ndim,sizeof(double));
+ tmp_const[j].Vo = (double *) calloc(ndim,sizeof(double));
+ tmp_const[j].kaverages = (double *) calloc((ndim-NPARS),sizeof(double));
+ tmp_const[j].kernel = (double **) malloc((ndim-NPARS)*sizeof(double *));
+ for(int k=0;k<ndim-NPARS;k++){
+ tmp_const[j].kernel[k] = (double *) calloc(ndim,sizeof(double));
+ }
+ }
+
+ int id=0;
+ while(1){
+ if(nsector==id){
+ break;
+ }
+ getline(slice_file,identifier);
+ if("sector"==identifier){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>sectorID[id];
+ }
+
+ if(" Vc "==identifier){
+ for(int l=0;l<ndim;l++){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Vc[l];
+ }
+ }
+ if(" Vd "==identifier){
+ for(int l=0;l<ndim;l++){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Vd[l];
+ }
+ }
+ if(" Vf "==identifier){
+ for(int l=0;l<ndim;l++){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Vf[l];
+ }
+ }
+ if(" Vz0 "==identifier){
+ for(int l=0;l<ndim;l++){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Vz0[l];
+ }
+ }
+
+ if(" Vo "==identifier){
+ for(int l=0;l<ndim;l++){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Vo[l];
+ }
+ }
+
+ if("kaverages"==identifier){
+ for(int l=0;l<ndim-NPARS;l++){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].kaverages[l];
+ }
+ }
+
+ if("kernel"==identifier){
+ for(int l=0;l<ndim-NPARS;l++){
+ for(int m=0;m<ndim;m++){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].kernel[l][m];
+ }
+ }
+ }
+
+ if("Cc"==identifier){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Cc;
+ }
+
+ if("Cd"==identifier){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Cd;
+ }
+
+ if("Cf"==identifier){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Cf;
+ }
+
+ if("Cz0"==identifier){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Cz0;
+ }
+
+ if("Co"==identifier){
+ getline(slice_file,tmp_e);
+ istringstream is( tmp_e );
+ is>>tmp_const[id].Co;
+ id++;
+ }
+ }//read ASCII file
+
+ for(int sub=0;sub<m_nsubregion;sub++){
+ int sub_nsector;
+ sub_nsector=nsector/m_nsubregion;
+ if(sub<nsector%m_nsubregion){
+ sub_nsector=sub_nsector+1;
+ }
+ sprintf(gcon_filename[sub],"corrgen_raw_%dL_%dM_reg%d_sub%d.gcon",nlayer,m_nsubregion,i,sub);
+ gcon_file = fopen(gcon_filename[sub],"w");
+ for(int j=0;j<6;j++){
+ fprintf(gcon_file,init_line[j].c_str());
+ fprintf(gcon_file,"\n");
+ }
+ fprintf(gcon_file," %d\n",nlayer);
+ fprintf(gcon_file,init_line[6].c_str());
+ fprintf(gcon_file,"\n");
+ fprintf(gcon_file,"%d\n",sub_nsector);
+ fprintf(gcon_file,init_line[7].c_str());
+ fprintf(gcon_file,"\n");
+ fprintf(gcon_file," %d\n",2);
+ fprintf(gcon_file,init_line[8].c_str());
+ for(int id=0;id<sub_nsector;id++){
+ fprintf(gcon_file,"sector\n");
+ fprintf(gcon_file,"%d\n",id);
+ fprintf(gcon_file," Vc \n");
+ for(int k=0;k<ndim;k++){
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Vc[k]);
+ }
+ fprintf(gcon_file," Vd \n");
+ for(int k=0;k<ndim;k++){
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Vd[k]);
+ }
+ fprintf(gcon_file," Vf \n");
+ for(int k=0;k<ndim;k++){
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Vf[k]);
+ }
+ fprintf(gcon_file," Vz0 \n");
+ for(int k=0;k<ndim;k++){
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Vz0[k]);
+ }
+ fprintf(gcon_file," Vo \n");
+ for(int k=0;k<ndim;k++){
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Vo[k]);
+ }
+ fprintf(gcon_file,"kaverages\n");
+ for(int k=0;k<ndim-NPARS;k++){
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].kaverages[k]);
+ }
+ fprintf(gcon_file,"kernel\n");
+ for(int k=0;k<ndim-NPARS;k++){
+ for(int m=0;m<ndim;m++){
+ fprintf(gcon_file,"%e \n",tmp_const[id*m_nsubregion+sub].kernel[k][m]);
+ }
+ }
+ fprintf(gcon_file,"Cc\n");
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Cc);
+ fprintf(gcon_file,"Cd\n");
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Cd);
+ fprintf(gcon_file,"Cf\n");
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Cf);
+ fprintf(gcon_file,"Cz0\n");
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Cz0);
+ fprintf(gcon_file,"Co\n");
+ fprintf(gcon_file,"%e\n",tmp_const[id*m_nsubregion+sub].Co);
+ }
+
+
+ }//for subregion
+ }// for region
+ //gcon file
+
+
+}
+
+int FTKConstGenAlgo::mtx_eigen(int dim, double *mtx_v, double *eigval_v, double *eigvecs_v) {
+ TMatrixD mtx(dim,dim,mtx_v);
+
+ // Catching singular matrix
+ TMatrixD chk_mtx(dim,dim,mtx_v);
+ TDecompLU dc(chk_mtx);
+ int status = dc.InvertLU(chk_mtx,MTX_TOLERANCE);
+ if(!status) return -1;
+ // Catching singular matrix
+
+ TVectorD eigvals(dim);
+ TMatrixD eigvecs(dim,dim);
+
+ // calculate eigvecs and aigvals
+ eigvecs = mtx.EigenVectors(eigvals);
+
+ // copy into the vectors in the right mode: autovetors per columun
+ double *tmpv = eigvals.GetMatrixArray();
+ // double *tmpm = eigvecs.GetMatrixArray();
+
+ for (int i=0;i<dim;++i){
+ for (int j=0;j<dim;++j) {
+ eigvecs_v[i*dim+j] = eigvecs[j][dim-1-i];
+ }
+ }
+
+ for (int i=0;i<dim;++i) {
+ eigval_v[i] = tmpv[dim-1-i];
+ }
+ return 0;
+}
+
+
+int FTKConstGenAlgo::mtx_invert(int dim, double *mtx_v) {
+ TMatrixD mtx(dim,dim,mtx_v);
+
+ // Catching singular matrix
+ TMatrixD chk_mtx(dim,dim,mtx_v);
+ TDecompLU dc(chk_mtx);
+ int status = dc.InvertLU(chk_mtx,MTX_TOLERANCE);
+ if(!status) return -1;
+ // Catching singular matrix
+
+ //mtx.Print();
+ mtx.Invert();
+
+ double *tmpm = mtx.GetMatrixArray();
+ for (int i=0;i<dim;++i) for (int j=0;j<dim;++j) {
+ mtx_v[i*dim+j] =tmpm[i*dim+j];
+ }
+
+ return 0;
+}
+
+// FlagAK: If constants are bad (eg, contain "nan"), fill them up with zeros!
+void FTKConstGenAlgo::nullifyConstants(int sector,int ndim) {
+ int i;
+ int j;
+ //printf("Sector %d has bad constants; nullifying them!\n",sector);
+ // to don't leave unitialized the variables
+ // fill of zero, matrix ad vector
+ gcorth[sector].Cc = geo_const[sector].Cc = .0;
+ gcorth[sector].Cd = geo_const[sector].Cd = .0;
+ gcorth[sector].Cf = geo_const[sector].Cf = .0;
+ gcorth[sector].Cz0 = geo_const[sector].Cz0 = .0;
+ gcorth[sector].Co = geo_const[sector].Co = .0;
+
+ for (i=0;i<ndim;++i) {
+ gcorth[sector].Vc[i] = geo_const[sector].Vc[i] = .0;
+ gcorth[sector].Vd[i] = geo_const[sector].Vd[i] = .0;
+ gcorth[sector].Vf[i] = geo_const[sector].Vf[i] = .0;
+ gcorth[sector].Vz0[i] = geo_const[sector].Vz0[i] = .0;
+ gcorth[sector].Vo[i] = geo_const[sector].Vo[i] = .0;
+ }
+
+ for (i=0;i<ndim-NPARS;++i) {
+ geo_const[sector].kaverages[i] = .0;
+ for (j=0;j<ndim;++j)
+ geo_const[sector].kernel[i][j] = .0;
+ }
+
+ geo_const[sector].real = 0; // flag for validate constants
+
+ return;
+}
+
+void FTKConstGenAlgo::sigmad(double *geoconstvect/*, double **marray*/, double **marrayinv,double *v,int ndim)
+{
+ //int i,k,j;
+ //double *vd,*sreturn,sigmadreturn,ssd;
+
+ int i,j;
+ double *vd;
+
+ if ((vd = (double*) calloc(ndim,sizeof(double)))==NULL) {
+ // svt_err(1,"main:error allocating vd") ;
+ }
+ for(i=0;i<ndim;i++)
+ {
+ for(j=0;j<ndim;j++)
+ vd[i] += marrayinv[i][j]*v[j];
+ }
+
+ for(i = 0;i < ndim;i++)
+ geoconstvect[i] = vd[i];
+
+ free(vd);
+}
+
+float FTKConstGenAlgo::proj(double *vec1, double *vec2, int size)
+{
+ float total=0;
+ int i;
+ for(i=0;i<size;i++)
+ total+=vec1[i]*vec2[i];
+ return (float)total;
+}
+
+// FlagAK: Check if constants are bad (eg, contain "nan")
+int FTKConstGenAlgo::failedConstants(int sector,int ndim) {
+ MsgStream log(msgSvc(), name());
+
+ int status = 0;
+ int i;
+ int j;
+
+ //check if the constants are reasonable
+ //Cc
+ if(TMath::IsNaN(gcorth[sector].Cc)) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Cc: " << gcorth[sector].Cc << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Cc)) {
+ // if(TMath::IsNaN(geo_const[sector].Cc) || geo_const[sector].Cc==0) {//tomoya
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Cc: " << geo_const[sector].Cc << endmsg;
+ status++;
+ }
+
+ //Cd
+ if(TMath::IsNaN(gcorth[sector].Cd)) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Cd: " << gcorth[sector].Cd << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Cd)) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Cd: " << geo_const[sector].Cd << endmsg;
+ status++;
+ }
+
+ //Cf
+ if(TMath::IsNaN(gcorth[sector].Cf)) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Cf: " << gcorth[sector].Cf << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Cf)) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Cf: " << geo_const[sector].Cf << endmsg;
+ status++;
+ }
+
+ //Cz0
+ if(TMath::IsNaN(gcorth[sector].Cz0)) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Cz0: " << gcorth[sector].Cz0 << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Cz0)) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Cz0: " << geo_const[sector].Cz0 << endmsg;
+ status++;
+ }
+
+ //Co
+ if(TMath::IsNaN(gcorth[sector].Co)) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Co: " << gcorth[sector].Co << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Co)) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Co: " << geo_const[sector].Co << endmsg;
+ status++;
+ }
+
+ for (i=0;i<ndim;++i) {
+ //Vc
+ if(TMath::IsNaN(gcorth[sector].Vc[i])) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Vc[" << i << "]: " << gcorth[sector].Vc[i] << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Vc[i])) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Vc[" << i << "]: " << geo_const[sector].Vc[i] << endmsg;
+ status++;
+ }
+
+ //Vd
+ if(TMath::IsNaN(gcorth[sector].Vd[i])) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Vd[" << i << "]: " << gcorth[sector].Vd[i] << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Vd[i])) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Vd[" << i << "]: " << geo_const[sector].Vd[i] << endmsg;
+ status++;
+ }
+
+ //Vf
+ if(TMath::IsNaN(gcorth[sector].Vf[i])) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Vf[" << i << "]: " << gcorth[sector].Vf[i] << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Vf[i])) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Vf[" << i << "]: " << geo_const[sector].Vf[i] << endmsg;
+ status++;
+ }
+
+ //Vz0
+ if(TMath::IsNaN(gcorth[sector].Vz0[i])) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Vz0[" << i << "]: " << gcorth[sector].Vz0[i] << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Vz0[i])) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Vz0[" << i << "]: " << geo_const[sector].Vz0[i] << endmsg;
+ status++;
+ }
+
+ //Vo
+ if(TMath::IsNaN(gcorth[sector].Vo[i])) {
+ log << MSG::DEBUG << "Bad gcorth[" << sector << "].Vo[" << i << "]: " << gcorth[sector].Vo[i] << endmsg;
+ status++;
+ }
+ if(TMath::IsNaN(geo_const[sector].Vo[i])) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].Vo[" << i << "]: " << geo_const[sector].Vo[i] << endmsg;
+ status++;
+ }
+
+ }
+
+ for (i=0;i<ndim-NPARS;++i) {
+ if(TMath::IsNaN(geo_const[sector].kaverages[i])) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].kaverages[" << i << "]: " << geo_const[sector].kaverages[i] << endmsg;
+ status++;
+ }
+ for (j=0;j<ndim;++j)
+ if(TMath::IsNaN(geo_const[sector].kernel[i][j])) {
+ log << MSG::DEBUG << "Bad geo_const[" << sector << "].kernel[" << i << "][" << j << "]: " << geo_const[sector].kernel[i][j];
+ status++;
+ }
+ }
+
+ return status;
+}
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattGenRoot.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattGenRoot.cxx
new file mode 100644
index 00000000000..60c0daadf7f
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattGenRoot.cxx
@@ -0,0 +1,1059 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "TrigFTKBankGen/FTKPattGenRoot.h"
+#include <fstream>
+#include <cmath>
+#include <algorithm>
+#include <TFile.h>
+#include <TDirectory.h>
+#include "TrigFTKSim/FTKSetup.h"
+#include "TrigFTKSim/FTKRootFile.h"
+#include <TFile.h>
+#include "TrigFTKSim/FTKTrack.h"
+// #include "TrigFTKSim/FTKPatternBySector.h"
+// #include "TrigFTKSim/ftk_dcap.h"
+#include "TrigFTKSim/ftk_dcap_helper.h"
+#include "TrigFTKBankGen/decodeEtacode.h"
+
+#ifdef DEBUG_BEAMSPOT
+#include "TrkGeometry/MagneticFieldProperties.h"
+#endif
+
+/* class FTKPattGenRoot
+ *
+ * Generate patterns from constants.
+ * authors: D. Britzger, after PattBankGenAlgo by L. Luongo, G. Volpi, ....
+ *
+ * Usage:
+ * FTKPattGenRoot pattgen(pmap,ssmap,sectorslice,rmap,m_curreg,constbank);
+ * pattgen.SetRootOutput("patterns.root");
+ * repeated times:
+ * pattgen.trackInvertion(m_trials,true);
+ * // patterns will be written when pattgen is destroyed
+ * Alternative usage: Use pointers and 'delete pattgen'.
+ *
+ * If desired write out also ascii format:
+ * (not yet implemented)
+ *
+ */
+
+using namespace std;
+
+//================== class FTKPattGenRoot =================
+
+
+
+FTKPattGenRoot::FTKPattGenRoot(int curreg, FTKSSMap* ssmap, FTKSectorSlice* slices, FTKConstantBank* constbank,int keep7of8,double tolerance7of8
+#ifdef DEBUG_BEAMSPOT
+ ,ToolHandle<Trk::IPropagator> *propagator
+#endif
+ )
+ : FTKLogging("FTKPattGenRoot"), m_curreg(curreg), m_ssmap(ssmap),
+ m_sectorslice(slices), m_constbank(constbank),
+ m_RndGauss(0),
+ m_RndFlat(0),
+ m_output(0),
+ m_patternWriter(0),
+ m_keep7of8(keep7of8),m_tolerance7of8(tolerance7of8),
+ m_d0_alpha(0.)
+#ifdef DEBUG_BEAMSPOT
+,m_propagator(propagator)
+#endif
+ {
+ /************************************************
+ *
+ * Create patterns from constants
+ * Input parameters are:
+ * + Current region: (int)curreg
+ * + SS map: ssmap (how many strips, pixels are in each layer's modules)
+ * + Sector slices: slices
+ * + Geometry constants: constbank
+ *
+ ************************************************/
+
+ SetSliceParameters(); // init slice parameters
+ m_constbank->prepareInvConstants();
+
+ m_select = ModuleGeometry; //FTKPattGenRoot::RndSector;
+
+ ostream & out=
+ (Info("FTKPattGenRoot")<<"keep 7/8 patterns for missing planes [");
+ unsigned mask=keep7of8;
+ for(int missing =0;mask;missing ++,mask>>=1) {
+ if(mask & 1) {
+ out<<" "<<missing;
+ }
+ }
+ out<<"]\n";
+}
+
+void FTKPattGenRoot::SetRandomNumberGenerator(CLHEP::HepRandomEngine* RndEng ) {
+ m_RndGauss=new CLHEP::RandGauss(RndEng);
+ m_RndFlat=new CLHEP::RandFlat(RndEng);
+}
+
+//___________________________________________________________________________________________ //
+FTKPattGenRoot::~FTKPattGenRoot() {
+ //! Destructor
+ //! Destroy pattern writer object to safe patterns to disk
+ Info("~FTKPattGenRoot")<<"Deleting PatternWriter = write root-patterns to disk"<<endl;
+ if ( m_patternWriter) delete m_patternWriter;
+ if(m_output) delete m_output;
+}
+
+
+//___________________________________________________________________________________________ //
+const FTKPlaneMap* FTKPattGenRoot::pmap() const {
+ return m_ssmap->getPlaneMap(); // same as m_rmap->getPlaneMap();
+}
+
+
+//___________________________________________________________________________________________ //
+void FTKPattGenRoot::DeleteMaps() {
+ // delete pointers of input files
+ m_ssmap=NULL;
+ Info("DeleteMaps")<<"Delete m_sectorslice"<<endl;
+ if (m_sectorslice) delete m_sectorslice;
+ m_sectorslice=NULL;
+ Info("DeleteMaps")<<"Delete m_constbank"<<endl;
+ if (m_constbank) delete m_constbank;
+ m_constbank=NULL;
+}
+
+
+//___________________________________________________________________________________________ //
+bool FTKPattGenRoot::GoodTrack(const FTKTrack& track, int isector, FTKPatternWithSector* tmp_curpatt,int *missingPlanesPtr,double *distancePtr) {
+ /**
+ * Check if track is in sector
+ * returns true or false
+ * tmp_curpatt is filled coordinates
+ */
+ int missing=0;
+ double distance=0.0;
+ for (int p=0; p<pmap()->getNPlanes(); ++p) {
+ int ndim = pmap()->getDim(p,1)==-1 ? 1 : 2;
+ FTKHit hit(ndim);
+ int ssid=-1;
+ // potential BUG with HWMODEID=2
+ // the section number and module number are not known
+ int section=0;
+ int phimod=0;
+ int etamod=0;
+ if(FTKSetup::getFTKSetup().getHWModeSS()==0) {
+ hit.setSector(m_sectorbank[isector].GetHit(p));
+ hit.setITkMode(FTKSetup::getFTKSetup().getITkMode());
+ section=hit.getSection();
+ phimod=hit.getPhiModule();
+ etamod=hit.getEtaModule();
+ }
+ double x_width=m_ssmap->getMap(p,section,phimod).m_phiwidth;
+ int ix = pmap()->getDim(p,0);
+ double x_track = track.getCoord(ix);
+ double x_ssid=x_track;
+ if(x_ssid<0) {
+ x_ssid=0.;
+ missing |= (1<<p);
+ } else if(x_ssid>=x_width) {
+ x_ssid=x_width-1.;
+ missing |= (1<<p);
+ }
+ double y_width=0.,y_track=0.,y_ssid=0.;
+ if(ndim==2) {
+ y_width=m_ssmap->getMap(p,section,etamod).m_etawidth;
+ int iy = pmap()->getDim(p,1);
+ y_track = track.getCoord(iy);
+ y_ssid=y_track;
+ if(y_ssid<0.) {
+ y_ssid=0.;
+ missing |= (1<<p);
+ } else if(y_ssid>=y_width) {
+ y_ssid=y_width-1;
+ missing |= (1<<p);
+ }
+ }
+ if (FTKSetup::getFTKSetup().getHWModeSS()==0) {
+ hit.setCoord(0, x_ssid);
+ if ( ndim==2) {
+ hit.setCoord(1, y_ssid);
+ }
+ // build hit
+ hit.setPlane(p);
+ hit.setEtaWidth(1);
+ hit.setPhiWidth(1);
+ ssid=m_ssmap->getSSGlobal(hit);
+ } else {
+ // HWMIDEID==2
+ int globalModuleId=m_sectorbank[isector].GetHit(p);
+ int localModuleID=m_ssmap->getRegionMap()
+ ->getLocalId(m_curreg,p,globalModuleId);
+ if(localModuleID<0) {
+ cout<<"globalModuleId="<<globalModuleId
+ <<" -> local="<<localModuleID<<"\n";
+ }
+ if(ndim==2) {
+ ssid=m_ssmap->compressed_ssid_word_pixel
+ (localModuleID,p,section,x_ssid,y_ssid);
+ } else {
+ ssid=m_ssmap->compressed_ssid_word_strip
+ (localModuleID,p,section,x_ssid);
+ }
+ }
+ tmp_curpatt->SetHit(p,ssid);
+ if(missing & (1<<p)) {
+ double d=(x_ssid-x_track)/x_width;
+ if(fabs(d)>distance) distance=d;
+ if(ndim==2) {
+ d=(y_ssid-y_track)/y_width;
+ if(fabs(d)>distance) distance=d;
+ }
+ }
+ } // for n-planes
+ if(missingPlanesPtr) *missingPlanesPtr=missing;
+ if(distancePtr) *distancePtr=distance;
+ return !missing;
+
+}
+
+
+//___________________________________________________________________________________________ //
+uint64_t FTKPattGenRoot::trackInvertion(u_int64_t ntrials, bool smear) {
+ //!
+ //! 'main' function ot do the track inversion
+ //! and generate patterns
+ //!
+
+ if (m_sectorbank.empty()) {
+ Error("trackInvertion")<<"No sectors given. Please call ReadSectorFile(filename) first."<<endl;
+ return 0;
+ }
+ FTKTrack track;
+ track.setNCoords(pmap()->getTotalDim());
+ static FTKPatternWithSector* tmp_curpatt = new FTKPatternWithSector(pmap()->getNPlanes());
+ static vector<double> constr(m_constbank->getNConstr()); // filled with 0
+
+ uint64_t nFound=0;
+ uint64_t nFound7of8=0;
+ uint64_t nSuccTrials=0;
+
+ ofstream *gap_monitoring=0;
+ ofstream *overlap_monitoring=0;
+ ofstream *trackpar_monitoring=0;
+#ifdef DEBUG_GAP_MONITORING
+ ostringstream gap_file_name;
+ gap_file_name<<"gap_monitoring_reg"<<m_curreg<<".txt";
+ gap_monitoring=new ofstream(gap_file_name.str().c_str());
+#endif
+#ifdef DEBUG_OVERLAP
+ ostringstream overlap_file_name;
+ overlap_file_name<<"overlap_monitoring_reg"<<m_curreg<<".txt";
+ overlap_monitoring=new ofstream(overlap_file_name.str().c_str());
+#endif
+#ifdef DEBUG_BEAMSPOT
+ ostringstream trackpar_file_name;
+ trackpar_file_name<<"trackpar_monitoring_reg"<<m_curreg<<".txt";
+ trackpar_monitoring=new ofstream(trackpar_file_name.str().c_str());
+#endif
+
+ for (u_int64_t t=0; t<ntrials; ++t) {
+ nSuccTrials++;
+ if ( nSuccTrials%1000000==0 )
+ Info("trackInvertion()")
+ <<"Number of all trials: "<<nSuccTrials
+ <<". Number of successful trials: "<<nFound
+ <<" with 7/8: "<<nFound7of8<<endl; //nFound==t
+ // build track with random numbers
+ GetRandomTrack(track);
+ // Convert phi to the format used in the constants calculations
+ ConvertPhi(track);
+
+ vector<int>* sectors = m_sectorslice->searchSectors(track);
+ //m_sectorHist->Fill((Double_t)sectors->size());
+ if (sectors->size() == 0) {
+ t--; // we want to have ntrials patterns (also below)
+ delete sectors;
+ continue;
+ }
+
+ // Generate constraints (random numbers from the standard Gaussian Distribution or 0)
+ if (smear)
+ for (unsigned int i=0; i<constr.size(); ++i)
+ constr[i] = getRandomGaus();
+
+ // loop over found sectors
+ std::vector<FTKPatternWithSector> found_patterns,found_patterns7of8;
+ std::map<int,pair<int,double> > info7of8;
+ for ( auto isec : *sectors ) {
+ tmp_curpatt->SetSectorID(isec); // not available in FTKPatternWithCoverage
+ tmp_curpatt->SetCoverage(1);
+ m_constbank->invlinfit(isec, track, &constr[0]); // set: track.setCoord
+ int missingPlanes=0;
+ double distance=0.;
+ if ( GoodTrack(track,isec,tmp_curpatt,&missingPlanes,&distance) ) {
+ found_patterns.push_back(*tmp_curpatt);
+ } else {
+ for(int missingPlane=0;missingPlane<pmap()->getNPlanes();
+ missingPlane++) {
+ // check whetrher 7/8 is allowed for this plane
+ if(!(m_keep7of8 & (1<<missingPlane))) continue;
+ // check whether there is exactly one hit missing in this plane
+ if(missingPlanes != (1<<missingPlane)) continue;
+ // check wthere distance is small enough
+ if(fabs(distance)>m_tolerance7of8) continue;
+
+ // check whether this is the first 7/8 pattern
+ // for the given missing plane
+ std::map<int,pair<int,double> >::iterator infoPtr=
+ info7of8.find(missingPlane);
+ if(infoPtr!=info7of8.end()) {
+ // previous pattern exists
+ if( fabs(distance)<fabs((*infoPtr).second.second)) {
+ // new hit has a smaller distance, replace
+ // old pattern
+ (*infoPtr).second.second= distance;
+ found_patterns7of8[(*infoPtr).second.first]=
+ *tmp_curpatt;
+ }
+ } else {
+ // first 7/8 pattern for this plane, always store it
+ info7of8[missingPlane]=
+ make_pair(found_patterns7of8.size(),distance);
+ found_patterns7of8.push_back(*tmp_curpatt);
+ }
+ }
+ }
+ }
+
+ // if there is no 8/8 pattern, try 7/8
+ bool is7of8=false;
+ if(found_patterns.empty() && m_keep7of8) {
+ found_patterns=found_patterns7of8;
+ is7of8=true;
+ } else {
+ if(overlap_monitoring && found_patterns.size()>1) {
+ (*overlap_monitoring)<<found_patterns.size();
+ for(unsigned i=0;i<found_patterns.size();i++) {
+ (*overlap_monitoring)
+ <<" "<<found_patterns[i].GetSectorID();
+ }
+ (*overlap_monitoring)<<"\n";
+ }
+ }
+ if(gap_monitoring && is7of8 && info7of8.size()) {
+ (*gap_monitoring)<< info7of8.size()<<"\n";
+ for(std::map<int,pair<int,double> >::const_iterator infoPtr=
+ info7of8.begin();infoPtr!=info7of8.end();infoPtr++) {
+ int isector=found_patterns[(*infoPtr).second.first].GetSectorID();
+ int moduleID=m_sectorbank[isector].GetHit((*infoPtr).first);
+ (*gap_monitoring)
+ <<(*infoPtr).first
+ <<" "<<moduleID
+ <<" "<<(*infoPtr).second.second<<"\n";
+ gap_monitoring->flush();
+ }
+ }
+
+ OverlapRemoval(found_patterns );
+
+ // patterns found? keep it following the selection criterion
+ if ( !found_patterns.empty() ) {
+ // sector selection
+ unsigned patt=0;
+ if ( m_select == FTKPattGenRoot::RndSector ) {
+ // prepare to iterate on the list of sector IDs
+ patt = (unsigned int)(found_patterns.size() * getRandom());//m_pEng->flat());
+ if(patt>=found_patterns.size()) patt=found_patterns.size();
+ } else if((m_select==ModuleGeometry)||
+ (m_select==ModuleGeometrySmallestSector)||
+ (m_select==ModuleGeometryBestMatch)) {
+ if(FTKSetup::getFTKSetup().getHWModeSS()!=2) {
+ Fatal("trackInvertion")
+ <<"Selector="<<m_select<<" only implemented for HDMODEID==2\n";
+ }
+ // for each candidate, calculate a weight 0<w<1
+ vector<double> weight(found_patterns.size());
+ unsigned nFound=0;
+ vector<unsigned> exactMatch;
+ static double const B_FACTOR=-0.3*2.083;// conversion factor 1/Mev -> 1/mm
+ double rho=B_FACTOR*track.getHalfInvPt() *(2.0);
+ for(unsigned ipatt=0;ipatt<found_patterns.size();ipatt++) {
+ double w=1.0;
+ bool found=true;
+ int isector=found_patterns[ipatt].GetSectorID();
+ // the weight w is the a product of the weights from each plane
+ for (int p=0; p<pmap()->getNPlanes(); ++p) {
+ // skip pixel planes - for sime reason it does not work
+ if(pmap()->getDim(p,1)!=-1) continue;
+ int id=m_sectorbank[isector].GetHit(p);
+ // lookup geometry by module ID
+ map<int,RZminmax_t>::const_iterator irz=
+ m_moduleBounds.find(id);
+ if(irz==m_moduleBounds.end()) {
+ // module not found
+ found=false;
+ } else {
+ RZminmax_t const &rz=(*irz).second;
+ // rMin,rMax and zMin,zMax are the
+ // module bounds in r,z
+ float dz=rz.zMax-rz.zMin;
+ float dr=rz.rMax-rz.rMin;
+ // track parameters in r,z
+ double cotTh=track.getCotTheta();
+ double z0=track.getZ0();
+ // d is the distance from the border
+ // in units of module size
+ // if the track is inside bounds, d=0
+ double d=0.0;
+ if(dz>dr) {
+ // barrel: module dimension in z is larger than in r
+ double r=0.5*(rz.rMax+rz.rMin);
+ // sagitta correction
+ double rrho=r*rho;
+ double s=r*(1.+rrho*rrho/24.);
+ double z=s*cotTh+z0;
+ if(z<rz.zMin) d=(rz.zMin-z)/dz;
+ if(z>rz.zMax) d=(z-rz.zMax)/dz;
+ /* cout<<"barr"<<p<<" "<<isector
+ <<" "<<z<<" "<<rz.zMin<<" "<<rz.zMax
+ <<" d="<<d<<"\n"; */
+ } else {
+ // endcap: module is smaller in z than in r
+ double z=0.5*(rz.zMax+rz.zMin);
+ double s=(z-z0)/cotTh;
+ // sagitta correction
+ double srho=s*rho;
+ double r=s*(1.-srho*srho/24.);
+ if(r<rz.rMin) d=(rz.rMin-r)/dr;
+ if(r>rz.rMax) d=(r-rz.rMax)/dr;
+ /*cout<<"endc"<<p<<" "<<isector
+ <<" "<<s<<" "<<rz.rMin<<" "<<rz.rMax
+ <<" d="<<d<<"\n"; */
+ }
+ if(d>0.0) {
+ w *=TMath::Exp(-d*d*50.);
+ }
+ }
+ }
+ if(found) {
+ nFound++;
+ }
+ weight[ipatt]=w;
+ if(w>=1.0) exactMatch.push_back(ipatt);
+ }
+ // here: sectors where track is within all modules bounds
+ // have weight=1
+ // the indices are stored in: exactMatch
+ // other sectors have 0<weight<1
+ // the weight is stored in weight[]
+ if(nFound!=found_patterns.size()) {
+ Fatal("trackInvertion")<<"some modules not found\n";
+ }
+ // throw a random number here, even if it is not sued
+ // -> algorithms can be compared event by event
+ double rndForSector=getRandom();
+ if(exactMatch.size()>0) {
+ // have an exact match
+ if((m_select==ModuleGeometrySmallestSector)||
+ (m_select==ModuleGeometryBestMatch)) {
+ // use smallest sector ID
+ patt=exactMatch[0];
+ } else {
+ // random selection
+ unsigned i= (unsigned)(exactMatch.size() * rndForSector);
+ if(i>=exactMatch.size()) i=exactMatch.size()-1;
+ patt=exactMatch[i];
+ }
+ } else {
+ // no exact match
+ if(m_select==ModuleGeometryBestMatch) {
+ // find sector with largest weight and use it
+ double maxw=-1.;
+ patt=0;
+ for(unsigned ipatt=0;ipatt<found_patterns.size();ipatt++) {
+ double w=weight[ipatt];
+ if(w>maxw) {
+ maxw=w;
+ patt=ipatt;
+ }
+ }
+ } else {
+ // random selection
+ // select a pattern according to probability
+ // given by the pattern weight
+ double wSum=0.0;
+ for(unsigned ipatt=0;ipatt<found_patterns.size();ipatt++) {
+ wSum+=weight[ipatt];
+ }
+ double threshold= wSum*rndForSector;
+ for(patt=0;patt<found_patterns.size()-1;patt++) {
+ threshold -=weight[patt];
+ if(threshold<=0.0) break;
+ }
+ }
+ }
+ static int print=30;
+ if(print) {
+ cout<<"candidates: [";
+ for(unsigned ipatt=0;ipatt<found_patterns.size();ipatt++) {
+ cout<<" "<<weight[ipatt];
+ }
+ cout<<"] selected: "<<patt<<" w="<<weight[patt]<<"\n";
+ print--;
+ //if(!print) exit(0);
+ }
+ } else {
+ Fatal("trackInvertion")<<"Selector not yet implemented."<<endl;
+ }
+
+ if ( m_patternWriter ) m_patternWriter->AppendPattern(found_patterns[patt]);
+ if(trackpar_monitoring) {
+#ifdef DEBUG_BEAMSPOT
+ Amg::Vector3D nominal(0.,0.,0.);
+ double theta=atan2(1.,track.getCotTheta());
+ Trk::Perigee trackpar
+ (track.getIP(),track.getZ0(),track.getPhi(),
+ theta,
+ 2.*track.getHalfInvPt()*sin(theta),
+ Trk::PerigeeSurface(nominal));
+
+ Trk::PerigeeSurface beamspot
+ (Amg::Vector3D(m_beamspot[0],m_beamspot[1],0.));
+
+ Trk::MagneticFieldProperties magnet
+ =Trk::MagneticFieldProperties(Trk::FullField);;
+ const Trk::TrackParameters* tP=
+ (*m_propagator)->propagate
+ (trackpar,beamspot,Trk::anyDirection, false,magnet);
+ double sinth=sin(tP->parameters()[Trk::theta]);
+#endif
+
+ (*trackpar_monitoring)
+ <<track.getPhi()
+ <<" "<<2.*track.getHalfInvPt()
+ <<" "<<track.getIP()
+ <<" "<<track.getZ0()
+ <<" "<<track.getCotTheta()
+#ifdef DEBUG_BEAMSPOT
+ <<" "<< tP->parameters()[Trk::phi]
+ <<" "<< tP->parameters()[Trk::qOverP]/sinth
+ <<" "<< tP->parameters()[Trk::d0]
+ <<" "<< tP->parameters()[Trk::z0]
+ <<" "<< cos(tP->parameters()[Trk::theta])/sinth
+ <<" "<<m_d0BS<<" "<<m_z0BS
+#endif
+ <<"\n";
+#ifdef DEBUG_BEAMSPOT
+ delete tP;
+#endif
+ }
+ nFound++;
+ if(is7of8) nFound7of8++;
+ }
+ else {
+ t--; // we want to have ntrials patterns (also above)
+ }
+ delete sectors;
+
+ } // for ntrials
+ if(gap_monitoring) delete gap_monitoring;
+ if(overlap_monitoring) delete overlap_monitoring;
+ if(trackpar_monitoring) delete trackpar_monitoring;
+
+ return nSuccTrials;
+}
+
+
+//___________________________________________________________________________________________ //
+void FTKPattGenRoot::OverlapRemoval(std::vector<FTKPatternWithSector>& patterns){
+ set<unsigned int> remove;
+ for ( unsigned int i = 0 ; i<patterns.size() ; i++ ) {
+ int s1 = patterns[i].GetSectorID();
+ for ( unsigned int j = i+1 ; j<patterns.size() ; j++ ) {
+ int s2 = patterns[j].GetSectorID();
+ int compsect = 0;
+ if ( !remove.count(s1) && !remove.count(s2) ) { // one of the two is already listed
+ if (m_overlap==0 ) compsect = 0 ; // no overlap removal
+ else if (m_overlap==1 ) compsect = OverlapSectorBarrel( s1, s2);
+ else if (m_overlap==2 ) compsect = OverlapSector( s1, s2);
+ else printf("Warning. cannot understand m_overlap. Allowed values are 0,1,2 but is %d\n",m_overlap);
+ //printf("(s1=%d,s2=%d)\tCOMPSECT=%d \n",s1,s2,compsect);
+ if ( compsect == 1 ) remove.insert(i);
+ if ( compsect == -1 ) remove.insert(j);
+ }
+ }
+ }
+
+ if (!remove.empty() ) {
+ for (set<unsigned int>::iterator it=remove.end(); it!=remove.begin(); ) {
+ it--;
+ }
+ }
+}
+
+
+//___________________________________________________________________________________________ //
+void FTKPattGenRoot::RemovePattern(std::vector<FTKPatternWithSector>& patterns, unsigned int id) {
+ if ( patterns.empty() ) return; // nothing todo
+ patterns.erase(patterns.begin()+id);
+}
+
+
+//___________________________________________________________________________________________ //
+int FTKPattGenRoot::OverlapSectorBarrel(int s1, int s2){
+ //! adapted from pe2sector.c
+ const FTKHitPattern& m1 = m_sectorbank[s1];
+ const FTKHitPattern& m2 = m_sectorbank[s2];
+ int score = 0;
+ int zero = 0;
+
+ if(pmap()->getNPlanes()==4){
+ Fatal("OverlapSectorBarrel")<<"NPLANES=4 Not implemented.\n";
+ }
+ if(FTKSetup::getFTKSetup().getHWModeSS()!=0) {
+ Fatal("OverlapSectorBarrel")
+ <<"HWMODEID="<<FTKSetup::getFTKSetup().getHWModeSS()
+ <<" not implemented.\n";
+ }
+
+ for(int i = 0; i < pmap()->getNPlanes(); ++i) {
+ int section = SECTION_INT(m1.GetHit(i));
+ int ireg = m_ssmap->getRegionMap()->getNumRegions()-1;
+ int rmap_maxplane = m_ssmap->getRegionMap()->getRegionMapItem(ireg,i,section).getPhiTot()-1; // crmap.map[crmap.regions-1][i][section].phi_tot-1;
+
+ if(m1.GetHit(i)%1000 == m2.GetHit(i)%1000) {
+ int diff = m1.GetHit(i)/1000 - m2.GetHit(i)/1000;
+ if(diff == 0)
+ zero++;
+ else if (diff == 1 || diff == -rmap_maxplane)
+ score++;
+ else if (diff == -1 || diff == rmap_maxplane)
+ score--;
+ else
+ return 0; // |diff|>1, no overlap
+
+ } else {
+ return 0; // diff eta, no overlap
+ }
+ }
+
+ if(score+zero == pmap()->getNPlanes() ) // complete overlap
+ return 1;
+ else if (zero-score == pmap()->getNPlanes()) // complete overlap reversed
+ return -1;
+ else
+ return 0; // no overlap
+}
+
+
+//___________________________________________________________________________________________ //
+int FTKPattGenRoot::OverlapSector(int s1, int s2){
+ //! adapted from pe2sector.c
+ const FTKHitPattern& m1 = m_sectorbank[s1];
+ const FTKHitPattern& m2 = m_sectorbank[s2];
+
+ int score=0;
+ int zero=0;
+
+ if(pmap()->getNPlanes()==4){
+ Fatal("OverlapSector")<<"NPLANES=4 Not implemented.\n";
+ }
+ if(FTKSetup::getFTKSetup().getHWModeSS()!=0) {
+ Fatal("OverlapSector")
+ <<"HWMODEID="<<FTKSetup::getFTKSetup().getHWModeSS()
+ <<" not implemented.\n";
+ }
+
+ // code adapted from pe2sector.c from stanalone code
+ for(int i = 0; i < pmap()->getNPlanes(); ++i) {
+ if( m1.GetHit(i) == m2.GetHit(i) ) { // Same module
+ zero++;
+ }
+ else { // Different module
+ int sdiff = SECTION_INT(m1.GetHit(i)) - SECTION_INT(m2.GetHit(i));
+ int pdiff = PHI_MOD_INT(m1.GetHit(i)) - PHI_MOD_INT(m2.GetHit(i));
+ int ediff = ETA_MOD_INT(m1.GetHit(i)) - ETA_MOD_INT(m2.GetHit(i));
+
+ if( ediff==0 && sdiff==0 ) { // Same eta and section, check phi
+ int section = SECTION_INT(m1.GetHit(i));
+ int ireg = m_ssmap->getRegionMap()->getNumRegions()-1;
+ int rmap_maxplane = m_ssmap->getRegionMap()->getRegionMapItem(ireg,i,section).getPhiTot()-1; // crmap.map[crmap.regions-1][i][section].phi_tot-1;
+ if (pdiff == 1 || pdiff == -rmap_maxplane)
+ score++; // Phi overlap in favor of s2
+ else if (pdiff == -1 || pdiff == rmap_maxplane)
+ score--; // Phi overlap in favor of s1
+ else
+ return 0; // |diff|>1, no overlap
+ }
+ else if (sdiff != 0) { // Section overlap is ok for disks
+ // If one is barrel and one endcap, take the barrel hit
+
+
+ if (pmap()->getPlane(i,SECTION_INT(m1.GetHit(i))).getIsEndcap()
+ && !pmap()->getPlane(i,SECTION_INT(m2.GetHit(i))).getIsEndcap()) {
+ // Section overlap in favor of s2
+ score++;
+ }
+ else if (!pmap()->getPlane(i,SECTION_INT(m1.GetHit(i))).getIsEndcap()
+ && pmap()->getPlane(i,SECTION_INT(m2.GetHit(i))).getIsEndcap()) {
+ // Section overlap in favor of s1
+ score--;
+ }
+ else if (pmap()->getPlane(i,SECTION_INT(m1.GetHit(i))).getPDisk()
+ == pmap()->getPlane(i,SECTION_INT(m2.GetHit(i))).getPDisk() ) {
+ // Same physical disk, different section -- no overlap
+ return 0;
+ }
+ else if ((CSIDE_INT(m1.GetHit(i)) && ASIDE_INT(m2.GetHit(i)))
+ || (ASIDE_INT(m1.GetHit(i)) && CSIDE_INT(m2.GetHit(i)))) {
+ // Opposite sides of the detector -- no overlap
+ return 0;
+ }
+ else {
+ // Now we have 2 endcap hits on the same side. Take the lower-z one.
+ if (pmap()->getPlane(i,SECTION_INT(m1.GetHit(i))).getPDisk()
+ > pmap()->getPlane(i,SECTION_INT(m2.GetHit(i))).getPDisk()) {
+ score++; // Section overlap in favor of s2
+ }
+ else {
+ score--; // Section overlap in favor of s1
+ }
+ }
+
+ }
+ else {
+ // Now we have ediff != 0 -- no overlap
+ return 0;
+ }
+ }
+ }
+
+ if(zero+score == pmap()->getNPlanes()) // complete overlap
+ return 1;
+ else if (zero-score == pmap()->getNPlanes()) // complete overlap reversed
+ return -1;
+ else
+ return 0; // no overlap
+}
+
+
+//___________________________________________________________________________________________ //
+void FTKPattGenRoot::SetRootOutput(const string& outfilename){
+ //! Set filename for output root file
+ if (m_patternWriter){
+ Warning("SetOutputFilename")<<"Pattern writer already initialized with a filename."<<endl;
+ delete m_patternWriter;
+ }
+ if(m_output) delete m_output;
+ m_output =
+ FTKRootFile::Instance()->CreateRootFile(outfilename.c_str());
+ if(!m_output) {
+ Fatal("SetRootOutput")<<" can not open file "<<outfilename<<"\n";
+ } else {
+ m_patternWriter = FTKPatternBySectorWriter::Factory(*m_output);
+ m_patternWriter->SetNLayers(pmap()->getNPlanes());
+ }
+ return;
+}
+
+
+//___________________________________________________________________________________________ //
+void FTKPattGenRoot::WriteMapsToFile() {
+ //! Write pmap to root-file
+ // check if filename is set
+ if ( !m_patternWriter ) {
+ Fatal("WriteMapsToFile") << "RootOutput not yet set."<<endl;
+ }
+ if ( !m_ssmap ) {
+ Fatal("WriteMapsToFile") << "ssmap not set."<<endl;
+ }
+ m_ssmap->WriteMapToRootFile(m_output, "TSP" );
+}
+
+
+//___________________________________________________________________________________________ //
+void FTKPattGenRoot::SetSliceParameters(double phi_min,double phi_max, double c_min,double c_max,
+ double d0_min,double d0_max, double z0_min,double z0_max,
+ double eta_min, double eta_max){
+ //! set slice parameters
+ //! Use +/- 999 for autotune parameters.
+ if ( !m_sectorslice ) {
+ Fatal("SetSliceParameters") << "*** Sector file must be specified first."<< endl;
+ exit(1);
+ }
+ m_phi_min = phi_min==-999. ? m_sectorslice->getAutotunePhiMin() : phi_min;
+ m_phi_max = phi_max== 999. ? m_sectorslice->getAutotunePhiMax() : phi_max;
+
+ m_c_min = c_min==-999. ? m_sectorslice->getAutotuneCMin() : c_min;//-0.000625;
+ m_c_max = c_max== 999. ? m_sectorslice->getAutotuneCMax() : c_max;// 0.000625;
+
+ m_d0_min = d0_min==-999. ? m_sectorslice->getAutotuneDMin() : d0_min;
+ m_d0_max = d0_max== 999. ? m_sectorslice->getAutotuneDMax() : d0_max;
+
+ m_z0_min = z0_min==-999. ? m_sectorslice->getAutotuneZ0Min() : z0_min;
+ m_z0_max = z0_max== 999. ? m_sectorslice->getAutotuneZ0Max() : z0_max;
+
+ m_eta_min = eta_min==-999. ? m_sectorslice->getAutotuneEtaMin() : eta_min;
+ m_eta_max = eta_max== 999. ? m_sectorslice->getAutotuneEtaMax() : eta_max;
+
+ // JW (2016.9.14) - Update the FTKSectorSlice object with these parameter ranges
+ if( phi_min != -999 ) m_sectorslice->setPhiMin( phi_min );
+ if( phi_max != 999 ) m_sectorslice->setPhiMax( phi_max );
+ if( c_min != -999 ) m_sectorslice->setCMin( c_min );
+ if( c_max != 999 ) m_sectorslice->setCMax( c_max );
+ if( d0_min != -999 ) m_sectorslice->setD0Min( d0_min );
+ if( d0_max != 999 ) m_sectorslice->setD0Max( d0_max );
+ if( z0_min != -999 ) m_sectorslice->setZ0Min( z0_min );
+ if( z0_max != 999 ) m_sectorslice->setZ0Max( z0_max );
+ if( eta_min != -999 ) m_sectorslice->setEtaMin( eta_min );
+ if( eta_max != 999 ) m_sectorslice->setEtaMax( eta_max );
+ m_sectorslice->resetStepSizes();
+
+ Info("SetSliceParameters")<<"Phi: "<<m_phi_min<<" "<<m_phi_max<<"\n";
+ Info("SetSliceParameters")<<"Eta: "<<m_eta_min<<" "<<m_eta_max<<"\n";
+ Info("SetSliceParameters")<<"C: "<<m_c_min<<" "<<m_c_max<<"\n";
+ Info("SetSliceParameters")<<"D0: "<<m_d0_min<<" "<<m_d0_max<<"\n";
+ Info("SetSliceParameters")<<"Z0: "<<m_z0_min<<" "<<m_z0_max<<"\n";
+
+}
+
+
+//___________________________________________________________________________________________ //
+double FTKPattGenRoot::getRandom(){
+ double rndm = m_RndFlat->fire();
+ return rndm;}
+
+
+//___________________________________________________________________________________________ //
+double FTKPattGenRoot::getRandomGaus(){
+ double rndm = m_RndGauss->fire();
+ return rndm;
+}
+
+
+//___________________________________________________________________________________________ //
+void FTKPattGenRoot::GetRandomTrack(FTKTrack& track){
+ //! Get random track using the sector parameters
+
+ track.setHalfInvPt(0.5*((m_c_max - m_c_min) * getRandom() + m_c_min)); // diff!?
+
+ track.setPhi( getRandom() * (m_phi_max - m_phi_min) + m_phi_min, false); //ok
+ track.setPhiRaw(track.getPhi(),false);
+
+ track.setCotTheta(TMath::SinH((m_eta_max - m_eta_min) * getRandom() + m_eta_min)); //ok
+
+ double d0;
+ if((m_d0_min!=m_d0_max)&&(m_d0_alpha!=0.)) {
+ // generate density f(r)= k*abs(r)^n
+ // int_0^x dx' = int_r0^r f(r')dr'
+ // x = F(r)-F(r0)
+ // z=x+F(r0) = F(r)
+ // F^-1(z) = r
+ // F(r) = k*r*abs(r)^n
+ // 1/k = r1*abs(r1)^n-r0*abs(r0)^n
+ // z/abs(z) * (abs(z)/k)^(1/(n+1)) = r
+
+ double f0=(m_d0_min!=0.) ? m_d0_min*pow(fabs(m_d0_min),m_d0_alpha) : m_d0_min;
+ double f1=(m_d0_max!=0.) ? m_d0_max*pow(fabs(m_d0_max),m_d0_alpha) : m_d0_max;
+ double k=1./(f1-f0);
+ if(k<0.0) {
+ // swap f0,f1
+ k=f0; f0=f1; f1=k;
+ k=1./(f1-f0);
+ }
+ double z=getRandom()+k*f0;
+ d0 = (z !=0.0) ? pow(fabs(z)/k,1./(1.+m_d0_alpha)) : 0.0;
+ if(z<0.0) d0= -d0;
+
+ // test: m_d0_alpha=0:
+ // f0=m_d0_min
+ // f1=m_d0_max
+ // k=1./(m_d0_max-m_d0_min)
+ // z = rnd + m_d0_min/(m_d0_max-m_d0_min)
+ // d0 = rnd*(m_d0_max-m_d0_min) + m_d0_min -> OK
+ //
+ } else {
+ d0=(m_d0_max - m_d0_min) * getRandom() + m_d0_min;
+ }
+ track.setIP(d0);
+ track.setZ0( getRandom() * (m_z0_max - m_z0_min) + m_z0_min); //ok
+
+#ifdef DEBUG_BEAMSPOT
+ m_d0BS=track.getIP();
+ m_z0BS=track.getZ0();
+#endif
+ if(!isBeamAtZero()) {
+ // transform D0,Z0 (defined wrt beamspot) to origin
+ transformToOrigin(track);
+ }
+
+ track.setIPRaw(track.getIP());
+ track.setZ0Raw(track.getZ0());
+}
+
+
+//___________________________________________________________________________________________ //
+bool FTKPattGenRoot::ReadSectorFile(const std::string& sectorfile){
+ //! Read sector file in ascii format
+ //! Return boolean if file was read successfully
+
+ if (!m_sectorbank.empty()) {
+ Warning("ReadSectorFile") << "*** Sector bank already initialized."<<endl;
+ return false;
+ }
+
+ // ftk_dcap can read gzip and bzip2 files
+ ftk_dcap::istream ifile;
+ bool okread = ftk_dcap::open_for_read(sectorfile.c_str(), ifile);
+ if (!ifile || !okread) {
+ Fatal("ReadSectorFile") << "*** Error loading the sector bank: " << sectorfile << endl;
+ }
+ if (!ifile || !okread) return false;
+
+ // Retrieve the number of patterns and planes
+ int tmpnplanes;
+ int nsectors;
+ ifile >> nsectors >> tmpnplanes;
+ if (tmpnplanes != pmap()->getNPlanes() ) {
+ cerr << "Wrong planes number in the sectors file: " << sectorfile << endl;
+ return false;
+ }
+ cout << "Loading " << nsectors << " sectors..." << endl;
+ if (nsectors > 0) {
+ m_sectorbank.resize(nsectors,FTKHitPattern(tmpnplanes));
+ for (int id=0; id<nsectors; id++) {
+ int ssid, sID, pID, cov;
+ {
+ ifile >> pID;
+ for (int ip=0; ip<tmpnplanes;++ip) { // loop on the planes
+ // the m_nplnes+1 element is the number of the sector
+ // the other are the SS index
+ ifile >> ssid;// patt.m_ssid[iplane];
+ m_sectorbank[id].SetHit(ip,ssid);
+ }
+ ifile >> sID;
+ ifile >> cov;
+ }
+ }
+ }
+ return true;
+}
+
+void FTKPattGenRoot::setBeamspot(double beamspotX,double beamspotY) {
+ m_beamspot[0]=beamspotX;
+ m_beamspot[1]=beamspotY;
+}
+
+bool FTKPattGenRoot::isBeamAtZero(void) const {
+ return hypot(m_beamspot[0],m_beamspot[1])<1.E-14;
+}
+
+void FTKPattGenRoot::transformToOrigin(FTKTrack &track) {
+ static double const B_FACTOR=-0.3*2.083;// conversion factor 1/Mev -> 1/mm
+ // parameters defined at the nominal vertex
+ double phi=track.getPhi();
+ double rho=B_FACTOR*track.getHalfInvPt() *(2.0);
+ double cotTheta=track.getCotTheta();
+ // parameters defined at beamspot
+ double d1=track.getIP();
+ double z1=track.getZ0();
+
+ double sPhi=sin(phi);
+ double cPhi=cos(phi);
+ double R= -m_beamspot[0]*sPhi+m_beamspot[1]*cPhi;
+ double Q= m_beamspot[0]*cPhi+m_beamspot[1]*sPhi;
+
+ double h1=2.*d1+rho*(d1*d1-Q*Q);
+ double d0=R+h1/(sqrt(rho*h1+1.)+1.);
+
+ double s= -Q/(rho*d1+1.);
+ double alpha=rho*s;
+ if(fabs(alpha)>1.E-7) {
+ s=asin(alpha)/rho;
+ }
+ double z0=z1+cotTheta*s;
+
+ track.setIP(d0);
+ track.setZ0(z0);
+}
+
+//___________________________________________________________________________________________ //
+void FTKPattGenRoot::ConvertPhi(FTKTrack& track){
+ //! Convert phi to the format used in the constants calculations
+ //! Requires
+ //! + m_curreg
+ //! + m_rmap
+ double local_phi(track.getPhi());
+ track.setPhi(remainder(local_phi,2.*M_PI));
+}
+
+#ifdef REALLY_UNUSED
+ if (m_ssmap->getRegionMap()->getNumRegions()==8) {
+ if (m_curreg>=3 && m_curreg<=5) {
+ while (local_phi<0) local_phi += TMath::TwoPi();
+ track.setPhi(local_phi);
+ }
+ }
+ else {
+ if (m_curreg==9 || m_curreg==10 || m_curreg==25 || m_curreg==26 ||
+ m_curreg==41 || m_curreg==42 || m_curreg==57 || m_curreg==58 ) {
+ while (local_phi>=TMath::TwoPi()) local_phi -= TMath::TwoPi();
+ while (local_phi<0) local_phi += TMath::TwoPi();
+ track.setPhi(local_phi);
+ }
+ }
+}
+#endif
+
+void FTKPattGenRoot::SetModuleGeometryCheck(const std::string &fileName,
+ SectorSelection select) {
+ m_select = select;
+ if(m_select==RndSector) {
+ Info("SetModuleGeometryCheck")
+ <<"select="<<m_select<<": no boudary check, random sector selection\n";
+ } else {
+ // read module geometry
+ TFile *f=new TFile(fileName.c_str());
+ TTree *t=0;
+ f->GetObject("modulePositions",t);
+ if(t) {
+ int id;
+ float r[2],z[2];
+ t->SetBranchAddress("id",&id);
+ t->SetBranchAddress("r",r);
+ t->SetBranchAddress("z",z);
+ for(int i=0;i<t->GetEntries();i++) {
+ t->GetEntry(i);
+ RZminmax_t &module=m_moduleBounds[id];
+ module.rMin=r[0];
+ module.rMax=r[1];
+ module.zMin=z[0];
+ module.zMax=z[1];
+ }
+ }
+ delete f;
+ if(m_moduleBounds.size()) {
+ Info("SetModuleGeometryCheck")
+ <<"found "<<m_moduleBounds.size()<<" modules\n";
+ if(m_select==ModuleGeometry) {
+ Info("SetModuleGeometryCheck")
+ <<"select="<<m_select<<" random sector within module bounds, or weighted by distance\n";
+ } else if(m_select==ModuleGeometrySmallestSector) {
+ Info("SetModuleGeometryCheck")
+ <<"select="<<m_select<<" smallest sector ID within module bounds, or weighted by distance\n";
+ } else if(m_select==ModuleGeometryBestMatch) {
+ Info("SetModuleGeometryCheck")
+ <<"select="<<m_select<<" smallest sector ID within module bounds, or best distance\n";
+ } else {
+ Error("SetModuleGeometryCheck")
+ <<"select="<<" (undefined selection algorithm)\n";
+ }
+ } else {
+ m_select= RndSector;
+ Error("SetModuleGeometryCheck")
+ <<"module geometry "<<fileName<<" not found\n";
+ Warning("SetModuleGeometryCheck")
+ <<"revert to select="<<m_select
+ <<": no boudary check, random sector selection\n";
+ }
+ }
+}
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattGenRootAlgo.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattGenRootAlgo.cxx
new file mode 100644
index 00000000000..1fa73d0505e
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattGenRootAlgo.cxx
@@ -0,0 +1,315 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "TrigFTKBankGen/FTKPattGenRootAlgo.h"
+#include "TrigFTKSim/FTKPMap.h"
+#include "TrigFTKSim/FTKRegionMap.h"
+#include "TrigFTKSim/FTKSSMap.h"
+#include "TrigFTKSim/FTKConstantBank.h"
+#include "TrigFTKSim/FTKTrack.h"
+#include "TrigFTKBankGen/FTKSectorSlice.h"
+#include "AthenaKernel/IAtRndmGenSvc.h"
+#include "TrigFTKSim/ftk_dcap.h"
+#include "TrigFTKSim/FTKSetup.h"
+#include "CLHEP/Random/RandomEngine.h"
+#include <sstream>
+#include <iostream>
+#include <fstream>
+#include <TMath.h>
+#include <boost/unordered_map.hpp>
+#include <list>
+#include "TrigFTKSim/FTKRootFile.h"
+#include "TrigFTKSim/FTKPatternBySector.h"
+#include "TrigFTKSim/FTKPatternWithCoverage.h"
+#include "AthenaKernel/IAtRndmGenSvc.h" // random numbers
+
+using namespace std;
+/////////////////////////////////////////////////////////////////////////////
+
+FTKPattGenRootAlgo::FTKPattGenRootAlgo(const std::string& name, ISvcLocator* pSvcLocator):
+ AthAlgorithm(name, pSvcLocator),
+ m_rndmSvc("AtRanluxGenSvc", name),
+ // m_pmap(0x0),
+ // m_rmap(0x0),
+ // m_ssmap(0x0), m_ssmap_tsp(0x0),
+ // m_constbank(0x0),
+ // m_sectorslice(0x0),
+ // m_force_am_hashmap(true),
+ m_ssmap_path(),
+ //m_ssmaptsp_path(),
+ m_pmap_path(),
+ m_rmap_path(),
+ m_modulelut_path(),
+ m_slices_path(),
+ m_fitconstants_path(),
+ m_sectors_path(),
+ m_IBLMode(1), // flag to change the IBLMode
+ m_fixEndcapL0(false),
+ m_ITkMode(false),
+ // m_dbghit_path(),
+ // m_ifile(),
+ // m_okread(false),
+ // m_ready(false),
+ // m_phi_min(),
+ // m_phi_max(),
+ // m_c_min(),
+ // m_c_max(),
+ // m_d0_min(),
+ // m_d0_max(),
+ // m_z0_min(),
+ // m_z0_max(),
+ // //m_ctheta_min(),
+ // //m_ctheta_max(),
+ // m_eta_min(),
+ // m_eta_max(),
+ m_rndStreamName("RANDOM"),
+ m_d0_alpha(0.),
+ //m_pEng(0),
+ // m_trials(0),
+ // m_track(),
+ // m_fin(),
+ // m_pattern_counter(0),
+ // m_npatterns_partial(0),
+ // m_emptySectorList(0),
+ // m_notAnyGoodSector(0),
+ // m_ss(0),
+ // m_dimspa(0),
+ // m_dimker(0),
+ // m_curreg(0),
+ // m_seed(0),
+ //m_PCONST_OVERLAP(0),
+ // m_rndGen(0x0),
+ // m_nplanes(0),
+ // m_nsectors(0),
+ // m_constr(0x0),
+ // m_smear(),
+ // m_rnd_sector_selection(),
+ // m_weighted_rnd_sector_selection(),
+ // m_no_sector_selection(),
+ // m_rnd_pattern_selection(),
+ // m_weighted_rnd_pattern_selection(),
+ // m_hitVector(0x0),
+ // m_npatterns_reproduced(0),
+ // m_npatterns_reproduced_partial(0),
+ // m_npatterns_merged(0),
+ // m_sectorbank(0x0),
+ // m_pattmap(0x0), m_curpatt(0x0),
+ // m_found_patterns(),
+ // m_sectors_covInt(0x0)
+ m_keep7of8(0),
+ m_tolerance7of8(0.1),
+
+ m_sectorSelection(FTKPattGenRoot::SectorSelection::ModuleGeometry),
+
+ m_pattgen(0),
+ m_totalPatterns(0),m_totalThrown(0)
+{
+ SetLogger(this);
+ declareProperty("ssmap_path", m_ssmap_path);
+ declareProperty("hwmodeid", m_HWMODEID);
+ //declareProperty("ssmaptsp_path", m_ssmaptsp_path);
+ declareProperty("pmap_path", m_pmap_path);
+ declareProperty("rmap_path", m_rmap_path);
+ declareProperty("ModuleLUTPath", m_modulelut_path);
+ declareProperty("slices", m_slices_path);
+ declareProperty("fitconsts", m_fitconstants_path);
+ declareProperty("sectors", m_sectors_path);
+ // declareProperty("dbghit_path", m_dbghit_path);
+ declareProperty("phi_min", m_phi_min);
+ declareProperty("phi_max", m_phi_max);
+ declareProperty("c_min", m_c_min);
+ declareProperty("c_max", m_c_max);
+ declareProperty("d0_min", m_d0_min);
+ declareProperty("d0_max", m_d0_max);
+ declareProperty("z0_min", m_z0_min);
+ declareProperty("z0_max", m_z0_max);
+ declareProperty("eta_min", m_eta_min);
+ declareProperty("eta_max", m_eta_max);
+ declareProperty("d0_alpha", m_d0_alpha);
+ declareProperty("beamspotX", m_beamspotX);
+ declareProperty("beamspotY", m_beamspotY);
+ //declareProperty("ctheta_min", m_ctheta_min);
+ //declareProperty("ctheta_max", m_ctheta_max);
+ declareProperty("rndmSvc", m_rndmSvc);
+ declareProperty("trials", m_trials);
+ // declareProperty("writeafternpatterns", m_writeafter);
+ // declareProperty("maxopenrootfiles", m_maxopenfiles);
+ declareProperty("curreg", m_curreg);
+ declareProperty("pconst_overlap", m_overlap);
+ declareProperty("OutputFile",m_OutputFile);
+ declareProperty("sectorSelection", m_sectorSelection);
+
+ // declareProperty("smear", m_smear);
+ // declareProperty("rnd_sector_selection", m_rnd_sector_selection);
+ // declareProperty("weighted_rnd_sector_selection", m_weighted_rnd_sector_selection);
+ // declareProperty("no_sector_selection", m_no_sector_selection);
+ // declareProperty("rnd_pattern_selection", m_rnd_pattern_selection);
+ // declareProperty("weighted_rnd_pattern_selection", m_weighted_rnd_pattern_selection);
+ declareProperty("IBLMode",m_IBLMode);
+ declareProperty("FixEndcapL0",m_fixEndcapL0);
+ declareProperty("ITkMode",m_ITkMode);
+ declareProperty("keep7of8",m_keep7of8);
+ declareProperty("tolerance7of8",m_tolerance7of8);
+ declareProperty("rndStreamName",m_rndStreamName);
+
+ declareProperty("ModuleGeometryFile",m_ModuleGeometryFile);
+
+#ifdef DEBUG_BEAMSPOT
+ m_propagator = new ToolHandle<Trk::IPropagator>
+ ( "Trk::RungeKuttaPropagator/DefaultPropagator");
+#endif
+}
+
+FTKPattGenRootAlgo::~FTKPattGenRootAlgo() {
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+StatusCode FTKPattGenRootAlgo::initialize() {
+
+#ifdef DEBUG_BEAMSPOT
+ if( (*m_propagator).retrieve().isFailure() ) {
+ ATH_MSG_FATAL( "Propagator tool not found");
+ return StatusCode::FAILURE;
+ }
+#endif
+
+ MsgStream log(msgSvc(), name());
+
+ // --- check input
+ if (m_pmap_path.empty()) { // check pmap file
+ log << MSG::FATAL << "Main plane map definition missing" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ if (m_rmap_path.empty()) { // check rmap file
+ log << MSG::FATAL << "Region map file needed" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ if (m_ssmap_path.empty() ) {// check ss file
+ log << MSG::FATAL << "No SS configuration file given" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ if (m_slices_path.empty()) { // check slices file
+ log << MSG::FATAL << "Slices file missing" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ if (m_fitconstants_path.empty()) { // check constants file
+ log << MSG::FATAL << "Fit constants bank missing" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ if (m_sectors_path.empty()) {
+ log << MSG::FATAL << "Sector file missing" << endmsg;
+ return StatusCode::FAILURE;
+ }
+ // --- ---
+
+ // --- set HWMODEID
+ FTKSetup &ftkset = FTKSetup::getFTKSetup();
+ ftkset.setHWModeSS(m_HWMODEID);
+ ftkset.setIBLMode(m_IBLMode);
+ ftkset.setfixEndcapL0(m_fixEndcapL0);
+ ftkset.setITkMode(m_ITkMode);
+
+ // --- Create the pmap file object
+ log << MSG::INFO << "RunPattGen() Make FTKPlaneMap." << endmsg;
+ FTKPlaneMap* pmap = new FTKPlaneMap(m_pmap_path.c_str());
+ if (!(*pmap)) {
+ log << MSG::FATAL << "Error using plane map: " << m_pmap_path << endmsg;
+ return StatusCode::FAILURE;
+ }
+
+ // --- Create region map object
+ log << MSG::INFO << "RunPattGen() Make FTKRegionMap." << endmsg;
+ FTKRegionMap* rmap = new FTKRegionMap(pmap, m_rmap_path.c_str());
+
+ if(m_HWMODEID==2) {
+ if(m_modulelut_path.empty()) {
+ log << MSG::FATAL <<"RunPattGen() A module LUT is required when HW SS calculation is required"<<endmsg;
+ return StatusCode::FAILURE;
+ } else {
+ rmap->loadModuleIDLUT(m_modulelut_path.c_str());
+ }
+ }
+
+ // --- Create ssmap
+ const bool force_am_hashmap = false;
+ log << MSG::INFO << "RunPattGen() Make FTKSSMap." << endmsg;
+ FTKSSMap* ssmap = new FTKSSMap(rmap, m_ssmap_path.c_str(), force_am_hashmap);
+
+ // --- Create the slices file object
+ log << MSG::INFO << "RunPattGen() Make FTKSectorSlice." << endmsg;
+ FTKSectorSlice* sectorslice = new FTKSectorSlice();
+ sectorslice->loadSlices(m_slices_path);
+
+ // --- create FTKConstantBank
+ log << MSG::INFO << "RunPattGen() Make FTKConstantBank." << endmsg;
+ FTKConstantBank* constbank = new FTKConstantBank(pmap->getTotalDim(), m_fitconstants_path.c_str());
+
+ // --- create pattgen object
+ log << MSG::INFO << "RunPattGen() Make FTKPattGenRoot."
+ << endmsg;
+
+ m_pattgen=new FTKPattGenRoot(m_curreg,ssmap,sectorslice,constbank,m_keep7of8,
+ m_tolerance7of8
+#ifdef DEBUG_BEAMSPOT
+ ,m_propagator
+#endif
+ );
+ log << MSG::INFO << "RunPattGen() beam spot at "
+ <<m_beamspotX<<" "<<m_beamspotY
+ << endmsg;
+ m_pattgen->SetRandomNumberGenerator(m_rndmSvc->GetEngine(m_rndStreamName));
+ m_pattgen->setBeamspot(m_beamspotX,m_beamspotY);
+ m_pattgen->ReadSectorFile(m_sectors_path); // set sectors path
+ m_pattgen->SetSliceParameters(m_phi_min,m_phi_max, m_c_min, m_c_max,
+ m_d0_min, m_d0_max, m_z0_min, m_z0_max, m_eta_min, m_eta_max);
+ m_pattgen->SetD0Exponent(m_d0_alpha);
+ m_pattgen->SetOverlapRemoval(m_overlap);
+ m_pattgen->SetModuleGeometryCheck
+ (m_ModuleGeometryFile,(FTKPattGenRoot::SectorSelection)m_sectorSelection);
+
+ // open output file
+ m_pattgen->SetRootOutput(m_OutputFile);
+
+ return StatusCode::SUCCESS;
+}
+
+
+// // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+StatusCode FTKPattGenRootAlgo::execute() {
+ uint64_t n=m_pattgen->trackInvertion(m_trials);
+ m_totalPatterns+=m_trials;
+ m_totalThrown+=n;
+ MsgStream log(msgSvc(), name());
+ log << MSG::INFO << "Number of trials: "
+ <<m_totalPatterns<<" / "<<m_totalThrown<<endmsg;
+
+ return StatusCode::SUCCESS;
+}
+
+
+// // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+
+StatusCode FTKPattGenRootAlgo::finalize() {
+ delete m_pattgen;
+ MsgStream log(msgSvc(), name());
+ log << MSG::INFO << "Total number of patterns: "
+ <<m_totalPatterns<<" / "<<m_totalThrown<<endmsg;
+ return StatusCode::SUCCESS;
+}
+
+
+// // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+
+void FTKPattGenRootAlgo::PostMessage(void) {
+ if (FTKLogger::m_type==0) ATH_MSG_FATAL(m_buffer->str());
+ else if(FTKLogger::m_type==1) ATH_MSG_ERROR(m_buffer->str());
+ else if(FTKLogger::m_type==2) ATH_MSG_WARNING(m_buffer->str());
+ else if(FTKLogger::m_type==3) ATH_MSG_INFO(m_buffer->str());
+ else if(FTKLogger::m_type==4) ATH_MSG_DEBUG(m_buffer->str());
+}
+
+
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattKDTree.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattKDTree.cxx
new file mode 100644
index 00000000000..2a5acaa75dd
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKPattKDTree.cxx
@@ -0,0 +1,765 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "TrigFTKBankGen/FTKPattKDTree.h"
+#include "TrigFTKBankGen/FTKBankGenAlgo.h"
+#include "TrigFTKBankGen/FTKConstGenAlgo.h"
+
+#include <stdio.h>
+#include <algorithm>
+#include <cmath>
+#include <ctime>
+#include <cassert>
+
+#include <iostream>
+
+using namespace std;
+
+// kdtree: First index is the bank, second index is the bitmask
+// We keep one kdtree for each bitmask
+static vector<map<unsigned int, FTKPattKDTree*> > kdtree;
+static vector<vector< FTKPattKDTree* > > sortedPatterns;
+static int kdplanes(0);
+static int kddims(0);
+matrix added;
+vector<double> added_hitc;
+vector<double> added_xC;
+vector<double> added_xD;
+vector<double> added_xPhi;
+vector<double> added_xCoto;
+vector<double> added_xZ;
+vector<double> added_covx;
+vector<short> new_intc;
+vector<short> new_intphi;
+vector<short> new_intd0;
+vector<short> new_intz0;
+vector<short> new_inteta;
+
+
+//FTKPattKDTree::FTKPattKDTree(const std::vector<int>& pattern,
+FTKPattKDTree::FTKPattKDTree(const std::vector<int>& pattern,
+ const std::vector<int>& hashID,
+ const std::vector<double>& tmphitc,
+ const std::vector<double>& tmpxC,
+ const std::vector<double>& tmpxD,
+ const std::vector<double>& tmpxPhi,
+ const std::vector<double>& tmpxCoto,
+ const std::vector<double>& tmpxZ,
+ const std::vector<double>& tmpcovx,
+ const std::vector<short>& int_c,
+ const std::vector<short>& int_phi,
+ const std::vector<short>& int_d0,
+ const std::vector<short>& int_z0,
+ const std::vector<short>& int_eta,
+ const float& hitcount,
+ int depth, FTKPattKDTree *parent,
+ const double& tmpC,const double& tmpD,const double& tmpPhi,
+ const double& tmpCoto,const double& tmpZ,const float& tmpnhit
+ ) :
+ // Convention for m_dim is that the last number is just the sector
+ m_dim(pattern.size()-1), m_depth(depth), m_below(1), m_pattern(pattern), m_hashID(hashID), m_hitcount(hitcount),m_tmpC(tmpC),
+ m_tmpD(tmpD),m_tmpPhi(tmpPhi),m_tmpCoto(tmpCoto),m_tmpZ(tmpZ),m_tmpnhit(tmpnhit),m_tmphitc(tmphitc),
+ m_tmpxC(tmpxC),m_tmpxD(tmpxD),m_tmpxPhi(tmpxPhi),m_tmpxCoto(tmpxCoto),m_tmpxZ(tmpxZ), m_tmpcovx(tmpcovx),
+ m_intc(int_c),m_intphi(int_phi),m_intd0(int_d0),m_intz0(int_z0),m_inteta(int_eta),m_nmissing(0), m_parent(parent), m_left(0), m_right(0)
+{
+
+ assert(m_dim>0);
+ // determine the SS that splits the hyper-space
+ m_splitplane = parent ? (parent->getSplitPlane()+1) : 0;
+ m_splitplane %= m_dim;
+
+ while( m_pattern[m_splitplane]/100 == -999 ) { m_splitplane++; m_splitplane %= m_dim; }
+
+ for( unsigned int i = 0, np=m_dim; i < np; i++ )
+ if( m_pattern[i]/100 == -999 ) m_nmissing++;
+
+}
+
+/** destructor of the Tree, recursively destroy all the level */
+FTKPattKDTree::~FTKPattKDTree()
+{
+ if (m_left) delete m_left;
+ if (m_right) delete m_right;
+}
+
+
+/** find an empty leaf to place this road in the kd-tree*/
+int
+//FTKPattKDTree::addNode(const std::vector<int>& pattern,
+FTKPattKDTree::addNode(const std::vector<int>& pattern,
+ const std::vector<int>& hashID,
+ const std::vector<double>& tmphitc,
+ const std::vector<double>& tmpxC,
+ const std::vector<double>& tmpxD,
+ const std::vector<double>& tmpxPhi,
+ const std::vector<double>& tmpxCoto,
+ const std::vector<double>& tmpxZ,
+ const std::vector<double>& tmpcovx,
+ const std::vector<short>& int_c,
+ const std::vector<short>& int_phi,
+ const std::vector<short>& int_d0,
+ const std::vector<short>& int_z0,
+ const std::vector<short>& int_eta,
+ const float& hitcount,
+ const double& tmpC,const double& tmpD,const double& tmpPhi,
+ const double& tmpCoto,const double& tmpZ,const float& tmpnhit)
+{
+
+ int nadded = 0;
+ // determine the direction
+ if ( pattern[m_splitplane] <= m_pattern[m_splitplane] ) {
+ // is the left part the axis
+ if (!m_left) {
+ // create a new sub-tree
+ m_left = new FTKPattKDTree(pattern,hashID,tmphitc,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ int_c,int_phi,int_d0,int_z0,int_eta,
+ hitcount,m_depth+1,this,tmpC,tmpD,tmpPhi,tmpCoto,tmpZ,tmpnhit);
+ ++nadded;
+ }
+ else {
+ // continue the search
+ nadded+=m_left->addNode(pattern,hashID,tmphitc,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ int_c,int_phi,int_d0,int_z0,int_eta,
+ hitcount,tmpC,tmpD,tmpPhi,tmpCoto,tmpZ,tmpnhit);
+ }
+ }
+ else if( pattern[m_splitplane] > m_pattern[m_splitplane] ) {
+ // is on the right part of the axis
+ if (!m_right) {
+ // create a new sub-tree
+ m_right = new FTKPattKDTree(pattern,hashID,tmphitc,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ int_c,int_phi,int_d0,int_z0,int_eta,
+ hitcount,m_depth+1,this,tmpC,tmpD,tmpPhi,tmpCoto,tmpZ,tmpnhit);
+ ++nadded;
+ }
+ else {
+ // continue the search
+ nadded+=m_right->addNode(pattern,hashID,tmphitc,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ int_c,int_phi,int_d0,int_z0,int_eta,
+ hitcount,tmpC,tmpD,tmpPhi,tmpCoto,tmpZ,tmpnhit);
+ }
+ }
+
+ m_below += nadded;
+ return nadded;
+}
+
+void
+FTKPattKDTree::markForRemoval() {
+
+ m_hitcount = -1;
+
+}
+
+void FTKPattKDTree::getAllBelow( std::vector< FTKPattKDTree* >& activePatts) {
+
+
+
+ if( !markedForRemoval() )
+ activePatts.push_back( this );
+
+ if( m_left )
+ m_left->getAllBelow(activePatts);
+
+ if( m_right )
+ m_right->getAllBelow(activePatts);
+
+
+}
+
+// Find all patterns in the tree similar to refpatt. If refpatt is in
+// the tree, it will be included.
+void FTKPattKDTree::findSimilar(bool const_test,
+ const vector<int>& refpatt,
+ const vector<double>& hitc,
+ const std::vector<double>& tmpxC,
+ const std::vector<double>& tmpxD,
+ const std::vector<double>& tmpxPhi,
+ const std::vector<double>& tmpxCoto,
+ const std::vector<double>& tmpxZ,
+ const std::vector<double>& tmpcovx,
+ const std::vector<short>& int_c,
+ const std::vector<short>& int_phi,
+ const std::vector<short>& int_d0,
+ const std::vector<short>& int_z0,
+ const std::vector<short>& int_eta,
+ set<FTKPattKDTree*> &nodes,
+ bool exactmatch,const double& C,const double& D,
+ const double& Phi,const double& Coto,const double& Z,
+ const float& nhit)
+{
+
+ if( m_hitcount > 0) {
+ // If refpatt matches this node, automatically insert it:
+ bool fullmatch(true);
+ for(unsigned int i = 0, j = m_dim; i < j && fullmatch; i++) {
+ if( refpatt[i] != m_pattern[i] &&
+ (refpatt[i]/100 != -999 || m_pattern[i]/100 != -999) )
+ fullmatch = false;
+ }
+
+
+ if( fullmatch ) {
+ nodes.insert(this);
+ if(!const_test){
+ added.C=m_tmpC+C;
+ added.D=m_tmpD+D;
+ added.Phi=m_tmpPhi+Phi;
+ added.Coto=m_tmpCoto+Coto;
+ added.Z=m_tmpZ+Z;
+
+ for (int i=0;i < kddims ;++i) {
+ added_hitc[i]=m_tmphitc[i]+hitc[i];
+ added_xC[i]=m_tmpxC[i]+tmpxC[i];
+ added_xD[i]=m_tmpxD[i]+tmpxD[i];
+ added_xPhi[i]=m_tmpxPhi[i]+tmpxPhi[i];
+ added_xCoto[i]=m_tmpxCoto[i]+tmpxCoto[i];
+ added_xZ[i]=m_tmpxZ[i]+tmpxZ[i];
+ for (int j=i;j < kddims ;++j) {
+ added_covx[i*kddims+j]=m_tmpcovx[i*kddims+j]+tmpcovx[i*kddims+j];
+ }
+ }
+
+ added.nhit=m_tmpnhit+nhit;
+
+ new_intc.resize(int(added.nhit));
+ new_intphi.resize(int(added.nhit));
+ new_intd0.resize(int(added.nhit));
+ new_intz0.resize(int(added.nhit));
+ new_inteta.resize(int(added.nhit));
+
+ for (int i=0;i <added.nhit ;++i) {
+ if(i<m_tmpnhit){
+ new_intc[i]= m_intc[i];
+ new_intphi[i]= m_intphi[i];
+ new_intd0[i]= m_intd0[i];
+ new_intz0[i]= m_intz0[i];
+ new_inteta[i]= m_inteta[i];
+
+ }else{
+ new_intc[i]= int_c[i-m_tmpnhit];
+ new_intphi[i]= int_phi[i-m_tmpnhit];
+ new_intd0[i]= int_d0[i-m_tmpnhit];
+ new_intz0[i]= int_z0[i-m_tmpnhit];
+ new_inteta[i]= int_eta[i-m_tmpnhit];
+
+ }
+ }
+ }//const test
+
+ // If we're looking for an exact match, we're done
+ if( exactmatch )
+ return;
+ }
+ else if( !exactmatch ) {
+ // evaluate if the superstrips are similar
+ bool match(true);
+ int refmissing(0);
+
+ for (int ip=0;ip < m_dim && match;++ip) {
+ // Count how many hits are missing. We only want to find similar
+ // patterns with more or fewer hits. The only found pattern with
+ // the same number of hits as the refpatt should be that pattern
+ // itself, if it is in the tree.
+
+ if( refpatt[ip]/100 == -999 ) {
+ refmissing++;
+ continue;
+ }
+
+ if( m_pattern[ip]/100 == -999 ) continue;
+
+ if( refpatt[ip] != m_pattern[ip] )
+ match = false;
+ }
+ if (match && refmissing != m_nmissing ) {
+ // this node is similar.
+ nodes.insert(this);
+ }
+ }
+ }
+
+ if (m_left) {
+ // if similar patterns could be in this part continue the search
+ if ( (!exactmatch && refpatt[m_splitplane]/100 == -999) ||
+ refpatt[m_splitplane] <= m_pattern[m_splitplane] ) {
+ m_left->findSimilar(const_test,refpatt,hitc,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ int_c,int_phi,int_d0,int_z0,int_eta,
+ nodes,exactmatch,C,D,Phi,Coto,Z,nhit);
+ }
+ }
+
+ if (m_right) {
+ // if similar patterns could be in this part continue the search
+ if ( (!exactmatch && refpatt[m_splitplane]/100 == -999) ||
+ refpatt[m_splitplane] > m_pattern[m_splitplane] ) {
+ m_right->findSimilar(const_test,refpatt,hitc,tmpxC,tmpxD,tmpxPhi,tmpxCoto,tmpxZ,tmpcovx,
+ int_c,int_phi,int_d0,int_z0,int_eta,
+ nodes,exactmatch,C,D,Phi,Coto,Z,nhit);
+ }
+ }
+}
+
+// Interface functions
+void initPattTree(int nbanks, int nplanes,int ndims) {
+
+ for(int i = 0; i < nbanks; i++) { kdtree.push_back( map<unsigned int, FTKPattKDTree*>() ); }
+ kdplanes = nplanes;
+ kddims = ndims;
+ added_hitc.resize(kddims);
+ added_xC.resize(kddims);
+ added_xD.resize(kddims);
+ added_xPhi.resize(kddims);
+ added_xCoto.resize(kddims);
+ added_xZ.resize(kddims);
+ added_covx.resize(kddims*kddims);
+
+}
+
+void finishPattTree() {
+ // Get rid of the pattern KD trees
+ sortedPatterns.clear();
+
+ for( unsigned int i = 0, nt = kdtree.size(); i < nt; i++ )
+ for( map<unsigned int, FTKPattKDTree*>::iterator j = kdtree[i].begin(),
+ jend = kdtree[i].end(); j != jend; j++ )
+ delete j->second;
+
+ kdtree.clear();
+
+}
+
+
+//int addKDPattern(int bank, bool const_test_mode, int* pattern, int mult,matrix Mtmp,double* hitc,
+int addKDPattern(int bank, bool const_test_mode, int* pattern, int *hashID, int mult,matrix Mtmp,double* hitc,
+ double* xC,double* xD,double* xPhi,double* xCoto,double* xZ,double* covx,
+ vector<short> int_c,vector<short> int_phi,vector<short> int_d0,
+ vector<short> int_z0,vector<short> int_eta){
+
+
+ // Return codes:
+ // -1 - cannot find matched pattern in const_test_mode
+ // 0 - Error
+ // 1 - Added
+ // 2 - Already existed
+
+ int nmissing = 0;
+ vector<int> thePatt;
+ vector<int> theHash;
+ vector<double> thehitc;
+ vector<double> thexC;
+ vector<double> thexD;
+ vector<double> thexPhi;
+ vector<double> thexCoto;
+ vector<double> thexZ;
+ vector<double> thecovx;
+
+ vector<short> intc;
+ vector<short> intphi;
+ vector<short> intd0;
+ vector<short> intz0;
+ vector<short> inteta;
+
+ set<FTKPattKDTree*> sims;
+
+ thePatt.resize(kdplanes);
+ theHash.resize(kdplanes);
+ thehitc.resize(kddims);
+ thexC.resize(kddims);
+ thexD.resize(kddims);
+ thexPhi.resize(kddims);
+ thexCoto.resize(kddims);
+ thexZ.resize(kddims);
+ thecovx.resize(kddims*kddims);
+
+ unsigned int bitmask = 0;
+ for( int i = 0; i < kdplanes; i++ ) {
+ if( pattern[i]/100 == -999 ) nmissing++;
+ else if( i < kdplanes-1 )
+ bitmask |= (1<<i);
+
+ thePatt[i] = pattern[i];
+ theHash[i] = hashID[i];
+ }
+
+ for( int i = 0; i < kddims; i++ ) {
+ thehitc[i]=hitc[i];
+ thexC[i]=xC[i];
+ thexD[i]=xD[i];
+ thexPhi[i]=xPhi[i];
+ thexCoto[i]=xCoto[i];
+ thexZ[i]=xZ[i];
+ for( int j = i; j < kddims; j++ ) {
+ thecovx[i*kddims+j]=covx[i*kddims+j];
+ }
+ }
+
+ intc.resize(int(Mtmp.nhit));
+ intphi.resize(int(Mtmp.nhit));
+ intd0.resize(int(Mtmp.nhit));
+ intz0.resize(int(Mtmp.nhit));
+ inteta.resize(int(Mtmp.nhit));
+
+
+ for( int i = 0; i < Mtmp.nhit; i++ ) {
+ intc[i]=int_c[i];
+ intphi[i]=int_phi[i];
+ intd0[i]=int_d0[i];
+ intz0[i]=int_z0[i];
+ inteta[i]=int_eta[i];
+ }
+
+ // Initialize the KD tree for this bank if it's not yet done:
+ if( kdtree[bank].count(bitmask) == 0 ) {
+ kdtree[bank][bitmask] = new FTKPattKDTree(thePatt,theHash,thehitc,thexC,thexD,thexPhi,thexCoto,thexZ,thecovx,
+ intc,intphi,intd0,intz0,inteta,
+ mult,0,0,Mtmp.C,Mtmp.D,Mtmp.Phi,Mtmp.Coto,Mtmp.Z,Mtmp.nhit);
+ return 1;
+ }
+
+ // Check for an exact match:
+ kdtree[bank][bitmask]->findSimilar(const_test_mode,thePatt,thehitc,thexC,thexD,thexPhi,thexCoto,thexZ,thecovx,
+ intc,intphi,intd0,intz0,inteta,
+ sims, true,Mtmp.C,Mtmp.D,Mtmp.Phi,Mtmp.Coto,Mtmp.Z,Mtmp.nhit);
+ assert(sims.size()<=1); // sanity check
+
+ // If the pattern is already in the tree, keep the one with the
+ // lower sector number.
+ if( sims.size() == 1 ) {
+
+ if( (*sims.begin())->getPattern()[kdplanes-1] <= thePatt[kdplanes-1] ) {
+ // Just increment the one in the tree and exit
+ if(const_test_mode){
+ return (*sims.begin())->getPattern()[kdplanes-1];
+ }else{
+ (*sims.begin())->incHitCount(mult);
+ (*sims.begin())->settmpC(added.C);
+ (*sims.begin())->settmpD(added.D);
+ (*sims.begin())->settmpPhi(added.Phi);
+ (*sims.begin())->settmpCoto(added.Coto);
+ (*sims.begin())->settmpZ(added.Z);
+ (*sims.begin())->settmpnhit(added.nhit);
+ (*sims.begin())->settmphitc(added_hitc);
+ (*sims.begin())->settmpxC(added_xC);
+ (*sims.begin())->settmpxD(added_xD);
+ (*sims.begin())->settmpxPhi(added_xPhi);
+ (*sims.begin())->settmpxCoto(added_xCoto);
+ (*sims.begin())->settmpxZ(added_xZ);
+ (*sims.begin())->settmpcovx(added_covx);
+ (*sims.begin())->setintc(new_intc);
+ (*sims.begin())->setintphi(new_intphi);
+ (*sims.begin())->setintd0(new_intd0);
+ (*sims.begin())->setintz0(new_intz0);
+ (*sims.begin())->setinteta(new_inteta);
+ }//const test mode
+ }
+ else {
+ // Need to deactivate the one in the tree add add this one
+ if(!const_test_mode){
+ float newCount = mult;
+ newCount += (*sims.begin())->getHitCount();
+ (*sims.begin())->markForRemoval();
+ kdtree[bank][bitmask]->addNode(thePatt,theHash,added_hitc,thexC,thexD,thexPhi,thexCoto,thexZ,thecovx,
+ intc,intphi,intd0,intz0,inteta,
+ newCount,added.C,added.D,added.Phi,added.Coto,added.Z,added.nhit);
+ }//const test mode
+ }
+ return 2;
+ }
+
+ sims.clear();
+
+ // Get all higher patterns similar to this one:
+ if( nmissing ) {
+ for( map<unsigned int, FTKPattKDTree*>::iterator it = kdtree[bank].begin(),
+ end = kdtree[bank].end(); it != end; it++ )
+ if( it->second->getNMissing() < nmissing )
+ it->second->findSimilar(const_test_mode,thePatt,thehitc,thexC,thexD,thexPhi,thexCoto,thexZ,thecovx,
+ int_c,int_phi,int_d0,int_z0,int_eta,sims);
+
+ // If it is similar to any higher patterns, increment those and exit
+ int nhigher = sims.size();
+
+ if( nhigher ) {
+ // Only increment by this amount since the current pattern could
+ // have multiple higher patterns, but we want to keep the overall
+ // normalization of tracks constant.
+ double inc = (double)mult/(double)nhigher;
+ for( set<FTKPattKDTree*>::iterator it = sims.begin(), end = sims.end();
+ it != end; it++ ) {
+ (*it)->incHitCount(inc);
+ }
+
+ return 2;
+ }
+ }
+
+ if(const_test_mode == true && Mtmp.nhit == 5){
+ return -1;//not match pattern
+ }else{
+ // If we are at this point, then we are going to add the pattern.
+ sims.clear();
+ for( map<unsigned int, FTKPattKDTree*>::iterator it = kdtree[bank].begin(),
+ end = kdtree[bank].end(); it != end; it++ )
+ if( it->second->getNMissing() > nmissing )
+ it->second->findSimilar(const_test_mode,thePatt,thehitc,thexC,thexD,thexPhi,thexCoto,thexZ,thecovx,
+ intc,intphi,intd0,intz0,inteta,sims);
+
+ // Absorb the hit counts of any similar patterns with fewer hits,
+ // then remove them from the tree.
+ double newmult = mult;
+ for( set<FTKPattKDTree*>::iterator it = sims.begin(), end = sims.end();
+ it != end; it++ ) {
+
+ newmult += (*it)->getHitCount();
+ (*it)->markForRemoval();
+ }
+
+ // Add the new pattern to the list
+ kdtree[bank][bitmask]->addNode(thePatt,theHash,thehitc,thexC,thexD,thexPhi,thexCoto,thexZ,thecovx,
+ intc,intphi,intd0,intz0,inteta,
+ newmult,Mtmp.C,Mtmp.D,Mtmp.Phi,Mtmp.Coto,Mtmp.Z,Mtmp.nhit);
+
+ return 1;
+ }
+}
+
+bool compare_patt(const FTKPattKDTree* a, const FTKPattKDTree* b) {
+ // The std::sort function takes a comparison operator that returns
+ // true if 'a' goes before the 'b'. Since we want to sort from
+ // most number of hits to least number, 'a' goes before 'b' if it
+ // has more hits.
+
+ if( a->getHitCount() > b->getHitCount() ) return true;
+ else return false;
+}
+
+bool compare_Mpatt(const FTKPattKDTree* a, const FTKPattKDTree* b) {
+
+ if( a->gettmpnhit() > b->gettmpnhit() ) return true;
+ else return false;
+}
+
+int sortPatterns(int bank) {
+
+
+ if( sortedPatterns.size() <= bank )
+ sortedPatterns.resize(bank+1);
+
+ sortedPatterns[bank].clear();
+
+ for(map<unsigned int, FTKPattKDTree*>::iterator it = kdtree[bank].begin(),
+ end = kdtree[bank].end(); it != end; it++ ) {
+ it->second->getAllBelow(sortedPatterns[bank]);
+ }
+ kdtree[bank].clear();
+
+ sort( sortedPatterns[bank].begin(),
+ sortedPatterns[bank].end(),
+ compare_patt );
+
+ return 1;
+
+}
+
+int sortMPatterns(int bank) {
+
+
+ if( sortedPatterns.size() <= bank )
+ sortedPatterns.resize(bank+1);
+
+ sortedPatterns[bank].clear();
+
+ for(map<unsigned int, FTKPattKDTree*>::iterator it = kdtree[bank].begin(),
+ end = kdtree[bank].end(); it != end; it++ ) {
+ it->second->getAllBelow(sortedPatterns[bank]);
+ }
+ kdtree[bank].clear();
+
+ sort( sortedPatterns[bank].begin(),
+ sortedPatterns[bank].end(),
+ compare_Mpatt );
+
+ return 1;
+
+}
+
+
+int getNPatterns(int bank) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ return sortedPatterns[bank].size();
+
+}
+
+int getPatternSS( int bank, int pattid, int plane) {
+
+ if( bank >= sortedPatterns.size() ) return -1;
+ if( pattid >= sortedPatterns[bank].size() ) return -1;
+
+ return sortedPatterns[bank][pattid]->getPattern()[plane];
+
+}
+
+int getPatthashID( int bank, int pattid, int plane) {
+
+ if( bank >= sortedPatterns.size() ) return -1;
+ if( pattid >= sortedPatterns[bank].size() ) return -1;
+
+ return sortedPatterns[bank][pattid]->gethashID()[plane];
+
+}
+
+int getPattNHits(int bank, int pattid) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+
+ return (int) sortedPatterns[bank][pattid]->getHitCount();
+
+}
+
+double getPattC(int bank, int pattid) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+
+ return sortedPatterns[bank][pattid]->gettmpC();
+
+}
+
+double getPattD(int bank, int pattid) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+
+ return sortedPatterns[bank][pattid]->gettmpD();
+
+}
+
+double getPattPhi(int bank, int pattid) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+
+ return sortedPatterns[bank][pattid]->gettmpPhi();
+
+}
+
+double getPattCoto(int bank, int pattid) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+
+ return sortedPatterns[bank][pattid]->gettmpCoto();
+
+}
+double getPattZ(int bank, int pattid) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+
+ return sortedPatterns[bank][pattid]->gettmpZ();
+
+}
+
+double getPatthitc(int bank, int pattid, int dim) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+
+ return sortedPatterns[bank][pattid]->gettmphitc()[dim];
+
+}
+
+float getPattnhit(int bank, int pattid) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+
+ return sortedPatterns[bank][pattid]->gettmpnhit();
+
+}
+
+double getPattxC(int bank, int pattid, int dim) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->gettmpxC()[dim];
+}
+
+double getPattxD(int bank, int pattid, int dim) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->gettmpxD()[dim];
+}
+
+double getPattxPhi(int bank, int pattid, int dim) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->gettmpxPhi()[dim];
+}
+
+double getPattxCoto(int bank, int pattid, int dim) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->gettmpxCoto()[dim];
+}
+
+double getPattxZ(int bank, int pattid, int dim) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->gettmpxZ()[dim];
+}
+
+double getPattcovx(int bank, int pattid, int dim2) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->gettmpcovx()[dim2];
+}
+
+
+
+
+short getPattintc(int bank, int pattid ,int nhit) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->getintc()[nhit];
+}
+
+
+short getPattintphi(int bank, int pattid ,int nhit) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->getintphi()[nhit];
+}
+
+
+short getPattintd0(int bank, int pattid ,int nhit) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->getintd0()[nhit];
+}
+
+short getPattintz0(int bank, int pattid ,int nhit) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->getintz0()[nhit];
+}
+
+
+short getPattinteta(int bank, int pattid ,int nhit) {
+
+ if( bank >= sortedPatterns.size() ) return 0;
+ if( pattid >= sortedPatterns[bank].size() ) return 0;
+ return sortedPatterns[bank][pattid]->getinteta()[nhit];
+}
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/FTKSectorSlice.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKSectorSlice.cxx
new file mode 100644
index 00000000000..c97883361ef
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/FTKSectorSlice.cxx
@@ -0,0 +1,321 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "TrigFTKBankGen/FTKSectorSlice.h"
+#include "TrigFTKSim/FTKSetup.h"
+#include <TROOT.h>
+#include <TFile.h>
+#include <TClonesArray.h>
+#include <TBits.h>
+#include <TMath.h>
+#include <GaudiKernel/MsgStream.h>
+#include <iostream>
+
+using namespace std;
+
+FTKSectorSlice::FTKSectorSlice() :
+ bits_phi(0x0),
+ bits_c(0x0),
+ bits_d(0x0),
+ bits_z0(0x0),
+ bits_ctheta(0x0),
+
+ m_phi_min(-TMath::Pi()),
+ m_phi_max(TMath::Pi()),
+ // m_c_min(-7e-4),
+ // m_c_max(7e-4),
+ m_c_min(-1e-3),
+ m_c_max(1e-3),
+ m_d0_min(-2.2),
+ m_d0_max(2.2),
+ m_z0_min(-120),
+ m_z0_max(120),
+ m_ctheta_min(TMath::SinH(-3)),
+ m_ctheta_max(TMath::SinH(3)),
+ m_eta_min(-3),
+ m_eta_max(3),
+
+ m_autotune_phi_min(999),
+ m_autotune_c_min(999),
+ m_autotune_d0_min(999),
+ m_autotune_z0_min(999),
+ m_autotune_ctheta_min(999),
+ m_autotune_eta_min(999),
+ m_autotune_phi_max(-999),
+ m_autotune_c_max(-999),
+ m_autotune_d0_max(-999),
+ m_autotune_z0_max(-999),
+ m_autotune_ctheta_max(-999),
+ m_autotune_eta_max(-999),
+
+ m_phi_nbins(0),
+ m_c_nbins(0),
+ m_d0_nbins(0),
+ m_z0_nbins(0),
+ m_ctheta_nbins(0),
+
+ m_step_phi(0),
+ m_step_c(0),
+ m_step_d0(0),
+ m_step_z0(0),
+ m_step_ctheta(0),
+
+ m_ITkMode(false)
+
+{
+ // nothing to do
+}
+
+void FTKSectorSlice::loadSlices(std::string slice_file_path) {
+
+ // Check if using ITk geometry
+ m_ITkMode = FTKSetup::getFTKSetup().getITkMode();
+
+ TFile slice_file(slice_file_path.c_str());
+
+ //TClonesArray *bits_phi = (TClonesArray*)slice_file.Get("c_bits_phi");
+ bits_phi = (TClonesArray*) (slice_file.Get("c_bits_phi")->Clone("bitsphi"));
+ m_phi_nbins = bits_phi->GetEntries();
+ m_step_phi = (m_phi_max - m_phi_min)/m_phi_nbins;
+
+ autotune(bits_phi,m_phi_min,m_phi_max,m_autotune_phi_min,m_autotune_phi_max,
+ true,"phi");
+ //TClonesArray *bits_c = (TClonesArray*) slice_file.Get("c_bits_c");
+ bits_c = (TClonesArray*) slice_file.Get("c_bits_c");
+ m_c_nbins = bits_c->GetEntries();
+ m_step_c = (m_c_max - m_c_min)/m_c_nbins;
+
+ autotune(bits_c,m_c_min,m_c_max,m_autotune_c_min,m_autotune_c_max,false,"c");
+
+ //TClonesArray *bits_d = (TClonesArray*)slice_file.Get("c_bits_d");
+ bits_d = (TClonesArray*)slice_file.Get("c_bits_d");
+ m_d0_nbins = bits_d->GetEntries();
+ m_step_d0 = (m_d0_max - m_d0_min)/m_d0_nbins;
+
+ autotune(bits_d,m_d0_min,m_d0_max,m_autotune_d0_min,m_autotune_d0_max,false,
+ "d0");
+
+ //TClonesArray *bits_z0 = (TClonesArray*)slice_file.Get("c_bits_z0");
+ bits_z0 = (TClonesArray*)slice_file.Get("c_bits_z0");
+ m_z0_nbins = bits_z0->GetEntries();
+ m_step_z0 = (m_z0_max - m_z0_min)/m_z0_nbins;
+
+ autotune(bits_z0,m_z0_min,m_z0_max,m_autotune_z0_min,m_autotune_z0_max,false,
+ "z0");
+
+ //TClonesArray *bits_ctheta = (TClonesArray*)slice_file.Get("c_bits_ctheta");
+ bits_ctheta = (TClonesArray*)slice_file.Get("c_bits_ctheta");
+ m_ctheta_nbins = bits_ctheta->GetEntries();
+ m_step_ctheta = (m_ctheta_max - m_ctheta_min)/m_ctheta_nbins;
+
+ autotune(bits_ctheta,m_ctheta_min,m_ctheta_max,
+ m_autotune_ctheta_min,m_autotune_ctheta_max,false,"cos(theta)");
+
+
+ m_autotune_eta_min=TMath::ASinH(m_autotune_ctheta_min);
+ m_autotune_eta_max=TMath::ASinH(m_autotune_ctheta_max);
+
+#if 0
+ for (int ibin=0;ibin!=m_phi_nbins;++ibin) {
+ TBits *curtbit = (TBits*) bits_phi->At(ibin);
+
+ }
+#endif
+ cout<<"number of sectors in the slide file \""<<slice_file_path
+ <<"\" : "<<((TBits const *)bits_ctheta->UncheckedAt(0))->GetNbits()
+ <<"\n";
+}
+
+void FTKSectorSlice::autotune
+(const TClonesArray *array,double_t x0,double_t x1,
+ double &autoMin,double &autoMax,bool isAzimuth,const char *debug) {
+ int nbin=array->GetEntries();
+ int i0,i1;
+ for(i0=0;(i0<nbin-1) &&
+ !((TBits const *)array->UncheckedAt(i0))->CountBits();i0++) { }
+ for(i1=nbin-1;(i1>0) &&
+ !((TBits const *)array->UncheckedAt(i1))->CountBits();i1--) { }
+ if(isAzimuth) {
+ int j;
+ vector<char> phi(nbin);
+ for(j=0;j<nbin;j++) {
+ if(((TBits const *)array->UncheckedAt(j%nbin))->CountBits()) {
+ // add safety margin: +/- 1 bin
+ phi[(j+nbin-1)%nbin]++;
+ phi[(j+nbin)%nbin]++;
+ phi[(j+nbin+1)%nbin]++;
+ }
+ }
+ // locate largest continuous region
+ int gap0=-1,gapStart=-1,gapSize=0;
+ for(j=0;j<2*nbin;j++) {
+ if(phi[j%nbin]) {
+ if(gap0<0) {
+ // start gap
+ gap0=j;
+ }
+ int size=j+1-gap0;
+ if(size>gapSize) {
+ gapStart=gap0;
+ gapSize=size;
+ }
+ } else {
+ // end gap
+ gap0=-1;
+ }
+ }
+ i0=gapStart;
+ i1=gapStart+gapSize-1;
+ }
+ autoMin=x0+((x1-x0)*i0)/nbin;
+ autoMax=x0+((x1-x0)*(i1+1))/nbin;
+ if(debug) {
+ cout<<"FTKSectorSlice::autotune "<<debug
+ <<" nbin="<<nbin<<" range=[ "<<x0<<" ; "<<x1
+ <<" ] result=[ "<<autoMin<<" ; "<<autoMax<<" ]\n";
+ }
+}
+
+double FTKSectorSlice::getAutotunePhiMin() {
+ return m_autotune_phi_min;
+}
+
+double FTKSectorSlice::getAutotuneCMin() {
+ return m_autotune_c_min;
+}
+
+double FTKSectorSlice::getAutotuneDMin() {
+ return m_autotune_d0_min;
+}
+
+double FTKSectorSlice::getAutotuneZ0Min() {
+ return m_autotune_z0_min;
+}
+
+double FTKSectorSlice::getAutotuneCthetaMin() {
+ return m_autotune_ctheta_min;
+}
+
+double FTKSectorSlice::getAutotuneEtaMin() {
+ return m_autotune_eta_min;
+}
+
+double FTKSectorSlice::getAutotunePhiMax() {
+ return m_autotune_phi_max;
+}
+
+double FTKSectorSlice::getAutotuneCMax() {
+ return m_autotune_c_max;
+}
+
+double FTKSectorSlice::getAutotuneDMax() {
+ return m_autotune_d0_max;
+}
+
+double FTKSectorSlice::getAutotuneZ0Max() {
+ return m_autotune_z0_max;
+}
+
+double FTKSectorSlice::getAutotuneCthetaMax() {
+ return m_autotune_ctheta_max;
+}
+
+double FTKSectorSlice::getAutotuneEtaMax() {
+ return m_autotune_eta_max;
+}
+
+vector<int>* FTKSectorSlice::searchSectors(FTKTrack& track) {
+
+ //std::vector<int> sectors;
+ Int_t bin;
+ //Int_t bin_phi, bin_c, bin_d0, bin_z0, bin_ctheta;
+ TBits *phi_bits;
+ TBits *c_bits;
+ TBits *d0_bits;
+ TBits *z0_bits;
+ TBits *ctheta_bits;
+
+ int error=0;
+
+ if ((track.getPhi()<m_phi_min) || (track.getPhi()>m_phi_max)) {
+ cout << "Error: wrong phi parameter " << track.getPhi() << '\n';
+ error++;
+ }
+ if ((2.*track.getHalfInvPt()<m_c_min) ||
+ (2.*track.getHalfInvPt()>m_c_max)) {
+ cout << "Error: wrong c parameter " << 2.*track.getHalfInvPt() << '\n';
+ error++;
+ }
+ if ((track.getIP()<m_d0_min) || (track.getIP()>m_d0_max)) {
+ cout << "Error: wrong d0 parameter " << track.getIP() << '\n';
+ error++;
+ }
+ if ((track.getZ0()<m_z0_min) || (track.getZ0()>m_z0_max)) {
+ cout << "Error: wrong z0 parameter " << track.getZ0() << '\n';
+ error++;
+ }
+ if ((track.getCotTheta()<m_ctheta_min) || (track.getCotTheta()>m_ctheta_max)) {
+ cout << "Error: wrong ctheta parameter " << track.getCotTheta() << '\n';
+ error++;
+ }
+ //if(error) exit(0);
+
+
+ bin = (Int_t)((track.getPhi()-m_phi_min)/m_step_phi);
+ bin = (bin+ m_phi_nbins)% m_phi_nbins; // modulo operator: phi wraps around
+ //bin_phi = bin;
+ phi_bits = (TBits*)(bits_phi->UncheckedAt(bin));
+ //phi_bits = (TBits*)(bits_phi->At(bin));
+
+ bin = (Int_t)((2.*track.getHalfInvPt()-m_c_min)/m_step_c);
+ // If the bin underrun or overrun set to min or max bin
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > m_c_nbins-1) ? m_c_nbins-1 : bin;
+ //bin_c = bin;
+ c_bits = (TBits*)(bits_c->UncheckedAt(bin));
+ //c_bits = (TBits*)(bits_c->At(bin));
+
+ bin = (Int_t)((track.getIP()-m_d0_min)/m_step_d0);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > m_d0_nbins-1) ? m_d0_nbins-1 : bin;
+ //bin_d0 = bin;
+ d0_bits = (TBits*)(bits_d->UncheckedAt(bin));
+ //d0_bits = (TBits*)(bits_d->At(bin));
+
+ bin = (Int_t)((track.getZ0()-m_z0_min)/m_step_z0);
+ bin = (bin < 0) ? 0 : bin;
+ //bin = (bin > m_z0_nbins) ? m_z0_nbins-1 : bin;
+ bin = (bin > m_z0_nbins-1) ? m_z0_nbins-1 : bin;
+ //bin_z0 = bin;
+ z0_bits = (TBits*)(bits_z0->UncheckedAt(bin));
+ //z0_bits = (TBits*)(bits_z0->At(bin));
+
+ bin = (Int_t)((track.getCotTheta()-m_ctheta_min)/m_step_ctheta);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > m_ctheta_nbins-1) ? m_ctheta_nbins-1 : bin;
+ //bin_ctheta = bin;
+ ctheta_bits = (TBits*)(bits_ctheta->UncheckedAt(bin));
+ //ctheta_bits = (TBits*)(bits_ctheta->At(bin));
+
+ TBits result_bits(c_bits->GetNbits());
+
+ // AND of all TBits
+ /// c-slices are ill-defined ???
+ /// remove 29.11.2016, STS
+ /// result_bits = *c_bits;
+ /// result_bits &= *d0_bits;
+ result_bits = *d0_bits;
+ result_bits &= *phi_bits;
+ result_bits &= *z0_bits;
+ result_bits &= *ctheta_bits;
+
+ vector<int> *sectors = new vector<int>();
+ unsigned int curPos = result_bits.FirstSetBit(0);
+ while (curPos != result_bits.GetNbits()) {
+ sectors->push_back((int) curPos);
+
+ curPos = result_bits.FirstSetBit(curPos+1);
+ }
+
+ return sectors;
+}
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/PattMergeRootAlgo.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/PattMergeRootAlgo.cxx
new file mode 100644
index 00000000000..fa8c83e4356
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/PattMergeRootAlgo.cxx
@@ -0,0 +1,116 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "TrigFTKBankGen/PattMergeRootAlgo.h"
+#include "TString.h"
+#include "TrigFTKSim/FTKMergeRoot.h"
+
+
+// #include "TrigFTKSim/FTKRootFile.h"
+// #include "TrigFTKSim/FTKPatternBySector.h"
+// #include "TrigFTKSim/FTKPatternWithCoverage.h"
+
+using namespace std;
+/////////////////////////////////////////////////////////////////////////////
+
+PattMergeRootAlgo::PattMergeRootAlgo(const std::string& name, ISvcLocator* pSvcLocator):
+ AthAlgorithm(name, pSvcLocator), m_MinCov(0),m_Compression(-1)
+{
+ SetLogger(this);
+ declareProperty("MinCoverage",m_MinCov);
+ declareProperty("Compression",m_Compression);
+ declareProperty("TextImportRootFile",m_TextImportRootFile);
+ declareProperty("RootOutFile",m_RootOutFile);
+ declareProperty("TextOutFile",m_TextOutFile);
+ declareProperty("NSub",m_NSub);
+ declareProperty("InputFiles",m_InputFiles, "Input files.");
+ declareProperty("WhereToRunMerging",m_WhereToRunMerging);
+ declareProperty("DeleteFilesAfterMerging",m_DeleteAfterMerging);
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+
+PattMergeRootAlgo::~PattMergeRootAlgo() {
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+StatusCode PattMergeRootAlgo::initialize() {
+
+ if ( !( TString(m_WhereToRunMerging).BeginsWith("i")
+ || TString(m_WhereToRunMerging).BeginsWith("f")
+ || TString(m_WhereToRunMerging).BeginsWith("e")) ) {
+ ATH_MSG_WARNING("PattMergeRootAlgo() "<< "WhereToRunMerging must start with 'i', 'e' or 'f' referring to the three steps of an athena algorithm (initialize, execute, finalize), but is: "<<m_WhereToRunMerging);
+ return StatusCode::FAILURE;
+ }
+
+ SetLogger(this);
+ ATH_MSG_INFO ("initialize()");
+ if ( TString(m_WhereToRunMerging).BeginsWith("i") ) return RunMerging();
+ else return StatusCode::SUCCESS;
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+
+StatusCode PattMergeRootAlgo::execute() {
+ ATH_MSG_INFO ("execute()");
+ if ( TString(m_WhereToRunMerging).BeginsWith("e") ) return RunMerging();
+ else return StatusCode::SUCCESS;
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+
+StatusCode PattMergeRootAlgo::finalize() {
+ ATH_MSG_INFO ("finalize()");
+ if ( TString(m_WhereToRunMerging).BeginsWith("f") ) return RunMerging();
+ else return StatusCode::SUCCESS;
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+
+StatusCode PattMergeRootAlgo::RunMerging() {
+ //! Do merging.
+ int error=0;
+ FTKMergeRoot merger(m_RootOutFile);
+ merger.SetDeleteFilesAfterMerging(m_DeleteAfterMerging);
+ // set text-import name if available
+ if ( m_TextImportRootFile!="" && TString(m_TextImportRootFile).EndsWith(".root") )
+ merger.SetTempRootFileName(m_TextImportRootFile);
+ else if ( m_TextImportRootFile!="" && TString(m_TextImportRootFile).EndsWith(".root") )
+ ATH_MSG_WARNING("TextImportRootFile does not end with .root. Using default TextImportName instead for temporary file.");
+ // add files to merger
+ merger.AddFiles(m_InputFiles);
+ // set number of sub regions (only supported by 'text-output')
+ //ATH_MSG_INFO ("RunMerging(). SetNSubregions: "<<m_NSub);
+ merger.SetNSubregions(m_NSub);
+ // do merging
+ error += merger.DoMerge(m_MinCov,m_Compression);
+ // write out in addition ascii-file if output file did not ended with '.root'
+ if ( m_TextOutFile!="" && !TString(m_TextOutFile).EndsWith(".root") )
+ merger.DoTextExport(m_TextOutFile);
+ //done
+ return error>0? StatusCode::FAILURE : StatusCode::SUCCESS;
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+
+
+void PattMergeRootAlgo::PostMessage(void) {
+ if(FTKLogger::m_type==0) ATH_MSG_FATAL(m_buffer->str());
+ else if(FTKLogger::m_type==1) ATH_MSG_ERROR(m_buffer->str());
+ else if(FTKLogger::m_type==2) ATH_MSG_WARNING(m_buffer->str());
+ else if(FTKLogger::m_type==3) ATH_MSG_INFO(m_buffer->str());
+ else if(FTKLogger::m_type==4) ATH_MSG_DEBUG(m_buffer->str());
+}
+
+
+// // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/atlparslice_root.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/atlparslice_root.cxx
new file mode 100644
index 00000000000..7ce390a52ff
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/atlparslice_root.cxx
@@ -0,0 +1,459 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "TrigFTKBankGen/atlparslice_root.h"
+#include <cstdlib>
+
+TSlices **s;
+
+TSlices::TSlices(int *nslices, double *minvals, double *maxvals) {
+ curPos=0;
+ result_bits=0;
+ ofile=0;
+ par_c_slices = nslices[0];
+ par_c_max = maxvals[0];
+ par_c_min = minvals[0];
+
+ par_d_slices = nslices[1];
+ par_d_max = maxvals[1];
+ par_d_min = minvals[1];
+
+ par_phi_slices = nslices[2];
+ par_phi_max = maxvals[2];
+ par_phi_min = minvals[2];
+
+ par_z0_slices = nslices[3];
+ par_z0_max = maxvals[3];
+ par_z0_min = minvals[3];
+
+ par_ctheta_slices = nslices[4];
+ par_ctheta_max = maxvals[4];
+ par_ctheta_min = minvals[4];
+}
+
+TSlices::~TSlices() {
+ if(ofile) if(ofile->IsOpen()) ofile->Close();
+ return;
+}
+
+void initNSlices(int N, int *nslices, double *minvals, double *maxvals) {
+ s = new TSlices*[N];
+ if(!s) {
+ std::cout << "Failed to allocate TSlices*[] of size " << N << "; exiting..." << std::endl;
+ exit(-1);
+ }
+ for(int i=0;i<N;i++) {
+ s[i] = new TSlices(nslices,minvals,maxvals);
+ if(!s) {
+ std::cout << "Failed to allocate TSlices[" << i << "]; exiting..." << std::endl;
+ exit(-1);
+ }
+ }
+}
+
+void initSlices(int index, int nsectors) {
+ s[index]->c_bits_c = new TClonesArray("TBits",s[index]->par_c_slices);
+ for(Int_t i = 0; i < s[index]->par_c_slices; ++i) {
+ new((*s[index]->c_bits_c)[i]) TBits(nsectors);
+ }
+ s[index]->c_bits_d = new TClonesArray("TBits",s[index]->par_d_slices);
+ for(Int_t i = 0; i < s[index]->par_d_slices; ++i) {
+ new((*s[index]->c_bits_d)[i]) TBits(nsectors);
+ }
+ s[index]->c_bits_phi = new TClonesArray("TBits",s[index]->par_phi_slices);
+ for(Int_t i = 0; i < s[index]->par_phi_slices; ++i) {
+ new((*s[index]->c_bits_phi)[i]) TBits(nsectors);
+ }
+ s[index]->c_bits_z0 = new TClonesArray("TBits",s[index]->par_z0_slices);
+ for(Int_t i = 0; i < s[index]->par_z0_slices; ++i) {
+ new((*s[index]->c_bits_z0)[i]) TBits(nsectors);
+ }
+ s[index]->c_bits_ctheta = new TClonesArray("TBits",s[index]->par_ctheta_slices);
+ for(Int_t i = 0; i < s[index]->par_ctheta_slices; ++i) {
+ new((*s[index]->c_bits_ctheta)[i]) TBits(nsectors);
+ }
+}
+void addSectorToSlice(int index, int sector, int c, int d, int phi, int z0, int ctheta) {
+ Int_t bin;
+ TBits *t;
+
+#ifdef DEBUG_ADDSECTORTOSLICE
+ Int_t bin_c,bin_d,bin_phi,bin_z0,bin_ctheta;
+#endif
+ bin =c;
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_c_slices-1) ? s[index]->par_c_slices-1 : bin;
+#ifdef DEBUG_ADDSECTORTOSLICE
+ bin_c = bin;
+#endif
+ t = (TBits *)(s[index]->c_bits_c->UncheckedAt(bin));
+ t->SetBitNumber(sector);
+
+ bin = d;
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_d_slices-1) ? s[index]->par_d_slices-1 : bin;
+#ifdef DEBUG_ADDSECTORTOSLICE
+ bin_d = bin;
+#endif
+ t = (TBits *)(s[index]->c_bits_d->UncheckedAt(bin));
+ t->SetBitNumber(sector);
+
+ bin= phi;
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_phi_slices-1) ? s[index]->par_phi_slices-1 : bin;
+#ifdef DEBUG_ADDSECTORTOSLICE
+ bin_phi = bin;
+#endif
+ t = (TBits *)(s[index]->c_bits_phi->UncheckedAt(bin));
+ t->SetBitNumber(sector);
+
+
+ bin =z0;
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_z0_slices-1) ? s[index]->par_z0_slices-1 : bin;
+#ifdef DEBUG_ADDSECTORTOSLICE
+ bin_z0 = bin;
+#endif
+ t = (TBits *)(s[index]->c_bits_z0->UncheckedAt(bin));
+ t->SetBitNumber(sector);
+
+ bin = ctheta;
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_ctheta_slices-1) ? s[index]->par_ctheta_slices-1 : bin;
+#ifdef DEBUG_ADDSECTORTOSLICE
+ bin_ctheta = bin;
+#endif
+ t = (TBits *)(s[index]->c_bits_ctheta->UncheckedAt(bin));
+ t->SetBitNumber(sector);
+
+#ifdef DEBUG_ADDSECTORTOSLICE
+ printf("AK %d %d %f %d %f %d %f %d %f %d %f\n",sector,bin_c,1/2.0/c,bin_d,d,bin_phi,phi,bin_z0,z0,bin_ctheta,ctheta);
+#endif
+}
+
+void saveSlices(int index, char *slice_file) {
+ s[index]->ofile = new TFile(slice_file,"recreate");
+ s[index]->c_bits_c->Write("c_bits_c",TObject::kSingleKey);
+ s[index]->c_bits_d->Write("c_bits_d",TObject::kSingleKey);
+ s[index]->c_bits_phi->Write("c_bits_phi",TObject::kSingleKey);
+ s[index]->c_bits_z0->Write("c_bits_z0",TObject::kSingleKey);
+ s[index]->c_bits_ctheta->Write("c_bits_ctheta",TObject::kSingleKey);
+ s[index]->ofile->Close();
+}
+
+void loadSlices(int index, char *slice_file) {
+ s[index]->ofile = new TFile(slice_file);
+ s[index]->c_bits_c = (TClonesArray*)s[index]->ofile->Get("c_bits_c");
+ s[index]->c_bits_d = (TClonesArray*)s[index]->ofile->Get("c_bits_d");
+ s[index]->c_bits_phi = (TClonesArray*)s[index]->ofile->Get("c_bits_phi");
+ s[index]->c_bits_z0 = (TClonesArray*)s[index]->ofile->Get("c_bits_z0");
+ s[index]->c_bits_ctheta = (TClonesArray*)s[index]->ofile->Get("c_bits_ctheta");
+}
+
+void searchSectors(int index, double c, double d, double phi, double z0, double ctheta) {
+ TBits *c_bits;
+ TBits *d_bits;
+ TBits *phi_bits;
+ TBits *z0_bits;
+ TBits *ctheta_bits;
+ Int_t bin;
+ Double_t step;
+
+#ifdef DEBUG_SEARCH_SECTORS
+ Int_t bin1,bin2,bin3,bin4,bin5;
+#endif
+
+ // Find bit arrays
+ // Compute form parameters the step size
+ step = (s[index]->par_c_max - s[index]->par_c_min)/s[index]->par_c_slices;
+ // Compute the bin
+ bin = (Int_t)((c - s[index]->par_c_min)/step);
+ // If the bin underrun or overrun set to min or max bin
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_c_slices-1) ? s[index]->par_c_slices-1 : bin;
+#ifdef DEBUG_SEARCH_SECTORS
+ bin1=bin;
+#endif
+ // Fetch TBits for the bin, the use of UncheckedAt is fast but risky
+ c_bits = (TBits *)(s[index]->c_bits_c->UncheckedAt(bin));
+ // Same for other parameters
+ step = (s[index]->par_d_max - s[index]->par_d_min)/s[index]->par_d_slices;
+ bin = (Int_t)((d - s[index]->par_d_min)/step);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_d_slices-1) ? s[index]->par_d_slices-1 : bin;
+#ifdef DEBUG_SEARCH_SECTORS
+ bin2=bin;
+#endif
+ d_bits = (TBits *)(s[index]->c_bits_d->UncheckedAt(bin));
+ step = (s[index]->par_phi_max - s[index]->par_phi_min)/s[index]->par_phi_slices;
+ bin = (Int_t)((phi - s[index]->par_phi_min)/step);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_phi_slices-1) ? s[index]->par_phi_slices-1 : bin;
+#ifdef DEBUG_SEARCH_SECTORS
+ bin3=bin;
+#endif
+ phi_bits = (TBits *)(s[index]->c_bits_phi->UncheckedAt(bin));
+ step = (s[index]->par_z0_max - s[index]->par_z0_min)/s[index]->par_z0_slices;
+ bin = (Int_t)((z0 - s[index]->par_z0_min)/step);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_z0_slices-1) ? s[index]->par_z0_slices-1 : bin;
+#ifdef DEBUG_SEARCH_SECTORS
+ bin4=bin;
+#endif
+ z0_bits = (TBits *)(s[index]->c_bits_z0->UncheckedAt(bin));
+ step = (s[index]->par_ctheta_max - s[index]->par_ctheta_min)/s[index]->par_ctheta_slices;
+ bin = (Int_t)((ctheta - s[index]->par_ctheta_min)/step);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_ctheta_slices-1) ? s[index]->par_ctheta_slices-1 : bin;
+#ifdef DEBUG_SEARCH_SECTORS
+ bin5=bin;
+#endif
+ ctheta_bits = (TBits *)(s[index]->c_bits_ctheta->UncheckedAt(bin));
+
+ // Initialize result bits
+ if(s[index]->result_bits == NULL)
+ s[index]->result_bits = new TBits(c_bits->GetNbits());
+
+ // AND of all TBits
+ *s[index]->result_bits = *c_bits;
+ *s[index]->result_bits &= *d_bits;
+ *s[index]->result_bits &= *phi_bits;
+ *s[index]->result_bits &= *z0_bits;
+ *s[index]->result_bits &= *ctheta_bits;
+
+#ifdef DEBUG_SEARCH_SECTORS
+ printf("pt=%.2f\td0=%.2f\tphi=%.2f\tz0=%.2f\tctheta=%.2f\n",1/(2*c),d,phi,z0,ctheta);
+ printf("bins = %d\t%d\t%d\t%d\t%d\n",bin1,bin2,bin3,bin4,bin5);
+ std::cout << c_bits->CountBits() << std::endl;
+ std::cout << d_bits->CountBits() << std::endl;
+ std::cout << phi_bits->CountBits() << std::endl;
+ std::cout << z0_bits->CountBits() << std::endl;
+ std::cout << ctheta_bits->CountBits() << std::endl;
+ std::cout << "FINAL: " << (*s[index]->result_bits).CountBits() << std::endl;
+#endif
+
+ // Reset position
+ s[index]->curPos=0;
+ // printf("phi=%f, bins = %d,%d,%d,%d,%d\n",phi,bin1,bin2,bin3,bin4,bin5);
+
+}
+
+int checkSector(int index, int sector, double c, double d, double phi, double z0, double ctheta) {
+ TBits *c_bits;
+ TBits *d_bits;
+ TBits *phi_bits;
+ TBits *z0_bits;
+ TBits *ctheta_bits;
+ Double_t step;
+ Int_t bin;
+
+ // Find bit arrays
+ step = (s[index]->par_c_max - s[index]->par_c_min)/s[index]->par_c_slices;
+ bin = (Int_t)((c - s[index]->par_c_min)/step);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_c_slices-1) ? s[index]->par_c_slices-1 : bin;
+ c_bits = (TBits *)(s[index]->c_bits_c->UncheckedAt(bin));
+ step = (s[index]->par_d_max - s[index]->par_d_min)/s[index]->par_d_slices;
+ bin = (Int_t)((d - s[index]->par_d_min)/step);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_d_slices-1) ? s[index]->par_d_slices-1 : bin;
+ d_bits = (TBits *)(s[index]->c_bits_d->UncheckedAt(bin));
+ step = (s[index]->par_phi_max - s[index]->par_phi_min)/s[index]->par_phi_slices;
+ bin = (Int_t)((phi - s[index]->par_phi_min)/step);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_phi_slices-1) ? s[index]->par_phi_slices-1 : bin;
+ phi_bits = (TBits *)(s[index]->c_bits_phi->UncheckedAt(bin));
+ step = (s[index]->par_z0_max - s[index]->par_z0_min)/s[index]->par_z0_slices;
+ bin = (Int_t)((z0 - s[index]->par_z0_min)/step);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_z0_slices-1) ? s[index]->par_z0_slices-1 : bin;
+ z0_bits = (TBits *)(s[index]->c_bits_z0->UncheckedAt(bin));
+ step = (s[index]->par_ctheta_max - s[index]->par_ctheta_min)/s[index]->par_ctheta_slices;
+ bin = (Int_t)((ctheta - s[index]->par_ctheta_min)/step);
+ bin = (bin < 0) ? 0 : bin;
+ bin = (bin > s[index]->par_ctheta_slices-1) ? s[index]->par_ctheta_slices-1 : bin;
+ ctheta_bits = (TBits *)(s[index]->c_bits_ctheta->UncheckedAt(bin));
+
+ if(c_bits->TestBitNumber(sector) &&
+ d_bits->TestBitNumber(sector) &&
+ phi_bits->TestBitNumber(sector) &&
+ z0_bits->TestBitNumber(sector) &&
+ ctheta_bits->TestBitNumber(sector))
+ return 1;
+ return 0;
+ // done
+}
+
+/*
+double autotuneMinC(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = 0; i < s[index]->c_bits_c->GetEntries(); ++i) {
+ tb = (TBits *)(s[index]->c_bits_c->UncheckedAt(i));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_c_max - s[index]->par_c_min)/s[index]->par_c_slices;
+ return s[index]->par_c_min + step*i;
+ }
+ }
+}
+double autotuneMinD(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = 0; i < s[index]->c_bits_d->GetEntries(); ++i) {
+ tb = (TBits *)(s[index]->c_bits_d->UncheckedAt(i));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_d_max - s[index]->par_d_min)/s[index]->par_d_slices;
+ return s[index]->par_d_min + step*i;
+ }
+ }
+}
+double autotuneMinPhi(int index) {
+ Double_t step;
+ Double_t val;
+ bool ignore_neg = false;
+ TBits *tb;
+ for(Int_t i = 0; i < s[index]->c_bits_phi->GetEntries(); ++i) {
+ tb = (TBits *)(s[index]->c_bits_phi->UncheckedAt(i));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ if(i==0) ignore_neg=true; // Special fix at the boundary -pi
+ step = (s[index]->par_phi_max - s[index]->par_phi_min)/s[index]->par_phi_slices;
+ val = (double)s[index]->par_phi_min + (double)step*i;
+ if(ignore_neg && val<0) continue;
+ return val;
+ }
+ }
+}
+double autotuneMinZ0(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = 0; i < s[index]->c_bits_z0->GetEntries(); ++i) {
+ tb = (TBits *)(s[index]->c_bits_z0->UncheckedAt(i));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_z0_max - s[index]->par_z0_min)/s[index]->par_z0_slices;
+ return s[index]->par_z0_min + step*i;
+ }
+ }
+}
+double autotuneMinCtheta(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = 0; i < s[index]->c_bits_ctheta->GetEntries(); ++i) {
+ tb = (TBits *)(s[index]->c_bits_ctheta->UncheckedAt(i));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_ctheta_max - s[index]->par_ctheta_min)/s[index]->par_ctheta_slices;
+ return s[index]->par_ctheta_min + step*i;
+ }
+ }
+}
+double autotuneMinEta(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = 0; i < s[index]->c_bits_ctheta->GetEntries(); ++i) {
+ tb = (TBits *)(s[index]->c_bits_ctheta->UncheckedAt(i));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_ctheta_max - s[index]->par_ctheta_min)/s[index]->par_ctheta_slices;
+ return TMath::ASinH(s[index]->par_ctheta_min + step*i);
+ }
+ }
+}
+
+double autotuneMaxC(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = s[index]->c_bits_c->GetEntries(); i > 0; --i) {
+ tb = (TBits *)(s[index]->c_bits_c->UncheckedAt(i-1));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_c_max - s[index]->par_c_min)/s[index]->par_c_slices;
+ return s[index]->par_c_max - step*(s[index]->c_bits_c->GetEntries() - i);
+ }
+ }
+}
+double autotuneMaxD(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = s[index]->c_bits_d->GetEntries(); i > 0; --i) {
+ tb = (TBits *)(s[index]->c_bits_d->UncheckedAt(i-1));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_d_max - s[index]->par_d_min)/s[index]->par_d_slices;
+ return s[index]->par_d_max - step*(s[index]->c_bits_d->GetEntries() - i);
+ }
+ }
+}
+// this magic is needed to properly handle +/- Pi boundary. I won't work with <=4 regions
+double autotuneMaxPhi(int index) {
+ Double_t step;
+ Double_t val;
+ bool ignore_pos = false;
+ Int_t entries = s[index]->c_bits_phi->GetEntries();
+ TBits *tb;
+ step = (s[index]->par_phi_max - s[index]->par_phi_min)/s[index]->par_phi_slices;
+ for(Int_t i = entries; i > 0; --i) {
+ tb = (TBits *)(s[index]->c_bits_phi->UncheckedAt(i-1));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ if(i==entries) ignore_pos=true; // Special fix at the boundary +pi
+ val = s[index]->par_phi_max - step*(s[index]->c_bits_phi->GetEntries() - i);
+ if(ignore_pos && val>0) continue;
+ return (ignore_pos ? val + 2*TMath::Pi() : val);
+ }
+ }
+}
+double autotuneMaxZ0(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = s[index]->c_bits_z0->GetEntries(); i > 0; --i) {
+ tb = (TBits *)(s[index]->c_bits_z0->UncheckedAt(i-1));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_z0_max - s[index]->par_z0_min)/s[index]->par_z0_slices;
+ return s[index]->par_z0_max - step*(s[index]->c_bits_z0->GetEntries() - i);
+ }
+ }
+}
+double autotuneMaxCtheta(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = s[index]->c_bits_ctheta->GetEntries(); i > 0; --i) {
+ tb = (TBits *)(s[index]->c_bits_ctheta->UncheckedAt(i-1));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_ctheta_max - s[index]->par_ctheta_min)/s[index]->par_ctheta_slices;
+ return s[index]->par_ctheta_max - step*(s[index]->c_bits_ctheta->GetEntries() - i);
+ }
+ }
+}
+double autotuneMaxEta(int index) {
+ Double_t step;
+ TBits *tb;
+ for(Int_t i = s[index]->c_bits_ctheta->GetEntries(); i > 0; --i) {
+ tb = (TBits *)(s[index]->c_bits_ctheta->UncheckedAt(i-1));
+ if(tb->FirstSetBit() != tb->GetNbits()) {
+ step = (s[index]->par_ctheta_max - s[index]->par_ctheta_min)/s[index]->par_ctheta_slices;
+ return TMath::ASinH(s[index]->par_ctheta_max - step*(s[index]->c_bits_ctheta->GetEntries() - i));
+ }
+ }
+}
+
+
+void printSectors(int index) {
+ unsigned int pos = 0;
+ printf("Matched these sectors: ");
+ while(1) {
+ pos = s[index]->result_bits->FirstSetBit(pos+1);
+ if(pos == s[index]->result_bits->GetNbits()) {
+ pos = 0;
+ break;
+ }
+ printf("%d ",pos);
+ }
+ printf("\n");
+}
+
+int popSector(int index) {
+ unsigned int pbup = s[index]->curPos;
+ s[index]->curPos = s[index]->result_bits->FirstSetBit(s[index]->curPos+1);
+ if(s[index]->curPos == s[index]->result_bits->GetNbits()) {
+ s[index]->curPos = 0;
+ return -1;
+ } else {
+ return s[index]->curPos;
+ }
+}
+*/
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/components/TrigFTKBankGen_entries.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/components/TrigFTKBankGen_entries.cxx
new file mode 100644
index 00000000000..da304f527c2
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/components/TrigFTKBankGen_entries.cxx
@@ -0,0 +1,33 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "GaudiKernel/DeclareFactoryEntries.h"
+
+#include "TrigFTKBankGen/FTKBankGenAlgo.h"
+#include "TrigFTKBankGen/FTKConstGenAlgo.h"
+
+#include "TrigFTKBankGen/PattMergeRootAlgo.h"
+
+#include "TrigFTKBankGen/FTKPattGenRootAlgo.h"
+
+#include "TrigFTKBankGen/FTKCachedBankGenAlgo.h"
+
+DECLARE_ALGORITHM_FACTORY(FTKBankGenAlgo)
+DECLARE_ALGORITHM_FACTORY(FTKConstGenAlgo)
+
+DECLARE_ALGORITHM_FACTORY(PattMergeRootAlgo)
+
+DECLARE_ALGORITHM_FACTORY(FTKPattGenRootAlgo)
+
+DECLARE_ALGORITHM_FACTORY(FTKCachedBankGenAlgo)
+
+DECLARE_FACTORY_ENTRIES(TrigFTKBankGen) {
+ DECLARE_ALGORITHM(FTKBankGenAlgo);
+ DECLARE_ALGORITHM(FTKConstGenAlgo);
+
+ DECLARE_ALGORITHM(PattMergeRootAlgo);
+
+ DECLARE_ALGORITHM(FTKTSPBankGenAlgo);
+
+ DECLARE_ALGORITHM(FTKCachedBankGenAlgo);
+}
diff --git a/Trigger/TrigFTK/TrigFTKBankGen/src/components/TrigFTKBankGen_load.cxx b/Trigger/TrigFTK/TrigFTKBankGen/src/components/TrigFTKBankGen_load.cxx
new file mode 100644
index 00000000000..156d43e6928
--- /dev/null
+++ b/Trigger/TrigFTK/TrigFTKBankGen/src/components/TrigFTKBankGen_load.cxx
@@ -0,0 +1,6 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
+#include "GaudiKernel/LoadFactoryEntries.h"
+
+LOAD_FACTORY_ENTRIES(TrigFTKBankGen)
diff --git a/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDetectorTool.h b/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDetectorTool.h
index e1624c1bc0e..8e00b412847 100644
--- a/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDetectorTool.h
+++ b/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDetectorTool.h
@@ -136,6 +136,8 @@ public:
virtual void dumpGlobalToLocalModuleMap();
virtual void dumpIDMap();
+
+ virtual void dumpModulePositions();
};
#endif // FTKDetectorTool_h
diff --git a/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDetectorToolI.h b/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDetectorToolI.h
index d265d44ce04..6b1f1525c86 100644
--- a/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDetectorToolI.h
+++ b/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDetectorToolI.h
@@ -32,6 +32,8 @@ class FTKDetectorToolI : virtual public IAlgTool
virtual void dumpGlobalToLocalModuleMap() = 0;
+ virtual void dumpModulePositions() =0;
+
virtual void dumpIDMap() = 0;
};
diff --git a/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDumpCondAlgo.h b/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDumpCondAlgo.h
index d53a2eda02b..377191f190b 100644
--- a/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDumpCondAlgo.h
+++ b/Trigger/TrigFTK/TrigFTKSim/TrigFTKSim/FTKDumpCondAlgo.h
@@ -38,6 +38,8 @@ private:
bool m_DumpIDMap;
+ bool m_DumpModulePositions;
+
int m_IBLMode;
bool m_ITkMode;
bool m_fixEndcapL0; //fix for endcap L0 in clustering
diff --git a/Trigger/TrigFTK/TrigFTKSim/scripts/TrigFTKSim_tf.py b/Trigger/TrigFTK/TrigFTKSim/scripts/TrigFTKSim_tf.py
index de82fcfe1cf..9210adc7d1c 100755
--- a/Trigger/TrigFTK/TrigFTKSim/scripts/TrigFTKSim_tf.py
+++ b/Trigger/TrigFTK/TrigFTKSim/scripts/TrigFTKSim_tf.py
@@ -198,6 +198,8 @@ def addFTKSimulationArgs(parser):
help='6/8 option for transition region', group='TrigFTKSim')
parser.add_argument('--Save1stStageTrks', default=False, type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
help='keep 1st stage tracks', group='TrigFTKSim')
+ parser.add_argument('--dumpModuleGeom', default=False, type=trfArgClasses.argFactory(trfArgClasses.argBool, runarg=True),
+ help='dump module geometry', group='TrigFTKSim')
#end JDC
diff --git a/Trigger/TrigFTK/TrigFTKSim/share/FTKDumpCond_8LcIbl123_jobOptions.py b/Trigger/TrigFTK/TrigFTKSim/share/FTKDumpCond_8LcIbl123_jobOptions.py
index fbe387c73d4..100e31caef9 100644
--- a/Trigger/TrigFTK/TrigFTKSim/share/FTKDumpCond_8LcIbl123_jobOptions.py
+++ b/Trigger/TrigFTK/TrigFTKSim/share/FTKDumpCond_8LcIbl123_jobOptions.py
@@ -14,14 +14,15 @@ print "Add FTKDetector tool"
FTKDet = FTKDetectorTool()
FTKDet.FTK_BadModuleMapPath = "badModulemap_8Lc_FTK.bmap"
FTKDet.ATLAS_BadModuleMapPath = "badModulemap_8Lc_ATLAS.bmap"
-FTKDet.pmap_path = "../Trigger/TrigFTK/TrigFTKSim/config/map_file/raw_8LcIbl123.pmap"
-FTKDet.rmap_path = "../Trigger/TrigFTK/TrigFTKSim/config/map_file/raw_12Libl.tmap"
+FTKDet.pmap_path = "x86_64-slc6-gcc62-opt/share/ftk_configuration/map_files/raw_8LcIbl123.pmap"
+FTKDet.rmap_path = "x86_64-slc6-gcc62-opt/share/ftk_configuration/map_files/raw_12Libl.tmap"
ToolSvc += FTKDet
FTKDumpCond = FTKDumpCondAlgo( "FTKDumpCondAlgo" , OutputLevel=INFO)
FTKDumpCond.IBLMode = 1
FTKDumpCond.DumpBadModules = True
FTKDumpCond.DumpGlobalToLocalMap = True
+FTKDumpCond.DumpModulePositions = True
theJob += FTKDumpCond
print theJob
diff --git a/Trigger/TrigFTK/TrigFTKSim/share/skeleton.FTKStandaloneSim.py b/Trigger/TrigFTK/TrigFTKSim/share/skeleton.FTKStandaloneSim.py
index cc3fca21ad6..a74b0b1a722 100644
--- a/Trigger/TrigFTK/TrigFTKSim/share/skeleton.FTKStandaloneSim.py
+++ b/Trigger/TrigFTK/TrigFTKSim/share/skeleton.FTKStandaloneSim.py
@@ -1106,8 +1106,26 @@ for runArgName in (runArgsFromTrfMandatory
raise RuntimeError("Failed to find mandatory FTKTrackFitter runtime "
"argument for transform %s" % runArgName)
-alg += FTKRoadFinder
-alg += FTKTrackFitter
+if hasattr(runArgs,"dumpModuleGeom"):
+ from TrigFTKSim.TrigFTKSimConf import FTKDetectorTool, FTKDumpCondAlgo
+ FTKDet = FTKDetectorTool()
+ FTKDet.FTK_BadModuleMapPath = "badModulemap_FTK.bmap"
+ FTKDet.ATLAS_BadModuleMapPath = "badModulemap_ATLAS.bmap"
+ FTKDet.pmap_path = runArgs.pmap_path
+ FTKDet.rmap_path = runArgs.rmap_path
+ ToolSvc += FTKDet
+
+ FTKDumpCond = FTKDumpCondAlgo("FTKDumpCondAlgo" , OutputLevel=INFO)
+ FTKDumpCond.IBLMode = runArgs.IBLMode
+ FTKDumpCond.DumpBadModules = False
+ FTKDumpCond.DumpGlobalToLocalMap = False
+ FTKDumpCond.DumpModulePositions = True
+
+ alg += FTKDumpCond
+
+else :
+ alg += FTKRoadFinder
+ alg += FTKTrackFitter
if not FTKTrackFitter.doTrackFile :
from AthenaPoolCnvSvc.WriteAthenaPool import AthenaPoolOutputStream
diff --git a/Trigger/TrigFTK/TrigFTKSim/src/FTKDetectorTool.cxx b/Trigger/TrigFTK/TrigFTKSim/src/FTKDetectorTool.cxx
index e75119647b3..5bf579032ae 100644
--- a/Trigger/TrigFTK/TrigFTKSim/src/FTKDetectorTool.cxx
+++ b/Trigger/TrigFTK/TrigFTKSim/src/FTKDetectorTool.cxx
@@ -10,6 +10,10 @@
#include <fstream>
#include <iostream>
+#include <TFile.h>
+#include <TTree.h>
+#include <TMath.h>
+
using namespace std;
FTKDetectorTool::FTKDetectorTool(const std::string &algname,const std::string &name, const IInterface *ifc)
@@ -471,3 +475,39 @@ void FTKDetectorTool::dumpIDMap()
}
}
+
+void FTKDetectorTool::dumpModulePositions() {
+ m_log << MSG::INFO << "dumpModulePositions"<< endmsg;
+ TFile *output=new TFile("FTKmodulePositions.root","recreate");
+ TTree *t=new TTree("modulePositions","modulePositions");
+ int idhash;
+ Float_t phi[2],r[2],z[2];
+ t->Branch("id",&idhash,"id/I");
+ t->Branch("phi",phi,"phi[2]/F");
+ t->Branch("r",r,"r[2]/F");
+ t->Branch("z",z,"z[2]/F");
+ for( InDetDD::SiDetectorElementCollection::const_iterator i=m_PIX_mgr->getDetectorElementBegin(), f=m_PIX_mgr->getDetectorElementEnd() ; i!=f; ++i ) {
+ const InDetDD::SiDetectorElement* sielement( *i );
+ idhash=sielement->identifyHash();
+ r[0]=sielement->rMin();
+ r[1]=sielement->rMax();
+ z[0]=sielement->zMin();
+ z[1]=sielement->zMax();
+ phi[0]=sielement->phiMin();
+ phi[1]=sielement->phiMax();
+ t->Fill();
+ }
+ for( InDetDD::SiDetectorElementCollection::const_iterator i=m_SCT_mgr->getDetectorElementBegin(), f=m_SCT_mgr->getDetectorElementEnd() ; i!=f; ++i ) {
+ const InDetDD::SiDetectorElement* sielement( *i );
+ idhash=sielement->identifyHash();
+ r[0]=sielement->rMin();
+ r[1]=sielement->rMax();
+ z[0]=sielement->zMin();
+ z[1]=sielement->zMax();
+ phi[0]=sielement->phiMin();
+ phi[1]=sielement->phiMax();
+ t->Fill();
+ }
+ t->Write();
+ delete output;
+}
diff --git a/Trigger/TrigFTK/TrigFTKSim/src/FTKDumpCondAlgo.cxx b/Trigger/TrigFTK/TrigFTKSim/src/FTKDumpCondAlgo.cxx
index ae1631bc851..777f864b290 100644
--- a/Trigger/TrigFTK/TrigFTKSim/src/FTKDumpCondAlgo.cxx
+++ b/Trigger/TrigFTK/TrigFTKSim/src/FTKDumpCondAlgo.cxx
@@ -27,6 +27,7 @@ FTKDumpCondAlgo::FTKDumpCondAlgo(const std::string& name, ISvcLocator* pSvcLocat
m_DumpModuleIDMap(false),
m_DumpGlobalToLocalMap(false),
m_DumpIDMap(false),
+ m_DumpModulePositions(false),
m_IBLMode(0),
m_ITkMode(false),
m_fixEndcapL0(false)
@@ -35,6 +36,7 @@ FTKDumpCondAlgo::FTKDumpCondAlgo(const std::string& name, ISvcLocator* pSvcLocat
declareProperty("DumpModuleIDMap", m_DumpModuleIDMap, "If true dumps the map of the modules in each tower");
declareProperty("DumpGlobalToLocalMap",m_DumpGlobalToLocalMap, "True if you want to produce the Global-to-Local map");
declareProperty("DumpIDMap",m_DumpIDMap);
+ declareProperty("DumpModulePositions",m_DumpModulePositions,"To dump the corner positions of the modules");
declareProperty("IBLMode",m_IBLMode);
declareProperty("ITkMode",m_ITkMode,"True if you want to assume ITk geometry for FTK plane/tower maps");
declareProperty("FixEndCapL0",m_fixEndcapL0, "Fix endcap L0 clustering");
@@ -94,6 +96,7 @@ StatusCode FTKDumpCondAlgo::execute() {
if (m_DumpGlobalToLocalMap) {
m_detectorTool->dumpGlobalToLocalModuleMap(); // Dump the map of the module of each tower
+ m_DumpGlobalToLocalMap=false;
}
if (m_DumpIDMap) {
@@ -101,6 +104,11 @@ StatusCode FTKDumpCondAlgo::execute() {
m_DumpIDMap = false; // in case you run on more than 1 event, only dump once
}
+ if(m_DumpModulePositions) {
+ m_detectorTool->dumpModulePositions();
+ m_DumpModulePositions=false;
+ }
+
return StatusCode::SUCCESS;
}
diff --git a/Trigger/TrigFTK/TrigFTKSim/src/FTKMergerAlgo.cxx b/Trigger/TrigFTK/TrigFTKSim/src/FTKMergerAlgo.cxx
index d94576ec2ca..607b89de53b 100644
--- a/Trigger/TrigFTK/TrigFTKSim/src/FTKMergerAlgo.cxx
+++ b/Trigger/TrigFTK/TrigFTKSim/src/FTKMergerAlgo.cxx
@@ -782,7 +782,12 @@ StatusCode FTKMergerAlgo::initStandaloneTracks()
if(m_ftktrack_tomerge_tree[ireg][isub]->FindBranch(Form("FTKTracksStream%d.",regNum))){
log << MSG::VERBOSE << "Setting branch with region number: " << regNum << " ireg: " << ireg << " isub: " << isub << endmsg;
m_ftktrack_tomerge_tree[ireg][isub]->SetBranchAddress(Form("FTKTracksStream%d.",regNum),&m_ftktrack_tomerge_stream[ireg][isub],&m_ftktrack_tomerge_branch[ireg][isub]);
-
+ if( m_MergeRoads) {
+ m_ftktrack_tomerge_tree[ireg][isub]->SetBranchAddress
+ (Form("FTKRoadsStream%d.",regNum),
+ &m_srbanks[ireg][isub],
+ &m_ftkroad_tomerge_branch[ireg][isub]);
+ }
//
// If not, Try to find branches named after merging has been done
//
@@ -790,9 +795,21 @@ StatusCode FTKMergerAlgo::initStandaloneTracks()
} else if (m_ftktrack_tomerge_tree[ireg][isub]->FindBranch(Form("FTKMergedTracksStream%d",regNum))) {
log << MSG::VERBOSE << "Setting merged branch with region number: " << regNum << " ireg: " << ireg << " isub: " << isub << endmsg;
m_ftktrack_tomerge_tree[ireg][isub]->SetBranchAddress(Form("FTKMergedTracksStream%d",regNum),&m_ftktrack_tomerge_stream[ireg][isub],&m_ftktrack_tomerge_branch[ireg][isub]);
+ if( m_srbanks[ireg][isub]) {
+ m_ftktrack_tomerge_tree[ireg][isub]->SetBranchAddress
+ (Form("FTKMergedRoadsStream%d.",regNum),
+ &m_srbanks[ireg][isub],
+ &m_ftkroad_tomerge_branch[ireg][isub]);
+ }
} else {
log << MSG::DEBUG << "Setting branch with name: FTKMergedTracksStream" << endmsg;
m_ftktrack_tomerge_tree[ireg][isub]->SetBranchAddress("FTKMergedTracksStream",&m_ftktrack_tomerge_stream[ireg][isub],&m_ftktrack_tomerge_branch[ireg][isub]);
+ if( m_srbanks[ireg][isub]) {
+ m_ftktrack_tomerge_tree[ireg][isub]->SetBranchAddress
+ ("FTKMergedRoadsStream.",
+ &m_srbanks[ireg][isub],
+ &m_ftkroad_tomerge_branch[ireg][isub]);
+ }
}
/// } // from not used else
diff --git a/Trigger/TrigFTK/TrigFTKSim/src/FTK_CompressedAMBank.cxx b/Trigger/TrigFTK/TrigFTKSim/src/FTK_CompressedAMBank.cxx
index 30e81e25e26..d6a4b3bdf70 100644
--- a/Trigger/TrigFTK/TrigFTKSim/src/FTK_CompressedAMBank.cxx
+++ b/Trigger/TrigFTK/TrigFTKSim/src/FTK_CompressedAMBank.cxx
@@ -1419,7 +1419,34 @@ void FTK_CompressedAMBank::importDCpatterns
for(int ilamb=0;ilamb<nlamb;ilamb++) {
//
// sector loop
- for(unsigned sector=ilamb;sector<sectorPointer.size();sector+=nlamb) {
+ unsigned max_sectorByNlamb=(sectorPointer.size()-1)/nlamb;
+ unsigned top_sectorByNlamb=0;
+ while(top_sectorByNlamb+1 <= max_sectorByNlamb) top_sectorByNlamb=(top_sectorByNlamb+1)*2-1;
+ // here: top_sectorByLamb has all bits set to one and is larger or equal the largest sector/nlamb
+ unsigned leadingBitMask=(top_sectorByNlamb>>1)+1;
+ unsigned sectorByLamb=0;
+ while(true) {
+ //for(unsigned sector=ilamb;sector<sectorPointer.size();sector+=nlamb) {
+ unsigned sector=sectorByLamb*nlamb+ilamb;
+
+ // count sectorByLamb from zero to top_sectorByNlamb
+ // bits are counted in reverse order: MSB first, then next, etc:
+ // e.g. if top_sectorByNlamb has 12 bit:
+ // 0x000, 0x800, 0x400, 0xc00, 0x200, 0xa00, 0x600, 0xe00, 0x100, ... 0xfff
+ // This randomizes the sector ordering, for better load-balancing of patterns
+ // in the hardware
+ for(unsigned mask=leadingBitMask;mask;mask>>=1) {
+ // count the bit indicated in "mask"
+ sectorByLamb^=mask;
+ // if the it is set, we are done
+ if(sectorByLamb & mask) break;
+ // if the bit is zero, have to count the next bit
+ }
+ if(!sectorByLamb) break; // all bits were counted, stop
+ // when counting in reverse bit order, sectors are not produced in sequence
+ // high (invalid) sector numbers are produced in random order and have
+ // to be skipped
+ if(sector>=sectorPointer.size()) continue; // skip sector numbers outside range
int nPattern=(sectorPointer[sector].second-
sectorPointer[sector].first)/offsetSSID;
if(!nPattern) continue;
diff --git a/Trigger/TrigFTK/TrigFTKSim/src/components/TrigFTKSim_entries.cxx b/Trigger/TrigFTK/TrigFTKSim/src/components/TrigFTKSim_entries.cxx
index e3bb6ec4e8c..01027cba285 100644
--- a/Trigger/TrigFTK/TrigFTKSim/src/components/TrigFTKSim_entries.cxx
+++ b/Trigger/TrigFTK/TrigFTKSim/src/components/TrigFTKSim_entries.cxx
@@ -1,3 +1,6 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
#include "GaudiKernel/DeclareFactoryEntries.h"
#include "TrigFTKSim/FTKRoadFinderAlgo.h"
#include "TrigFTKSim/FTKDumpCondAlgo.h"
diff --git a/Trigger/TrigFTK/TrigFTKSim/src/components/TrigFTKSim_load.cxx b/Trigger/TrigFTK/TrigFTKSim/src/components/TrigFTKSim_load.cxx
index cc17e7785b5..53f50a648f9 100644
--- a/Trigger/TrigFTK/TrigFTKSim/src/components/TrigFTKSim_load.cxx
+++ b/Trigger/TrigFTK/TrigFTKSim/src/components/TrigFTKSim_load.cxx
@@ -1,3 +1,6 @@
+/*
+ Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
+*/
#include "GaudiKernel/LoadFactoryEntries.h"
LOAD_FACTORY_ENTRIES(TrigFTKSim)
diff --git a/Trigger/TrigFTK/TrigFTKSim/standalone/dataflow.cc b/Trigger/TrigFTK/TrigFTKSim/standalone/dataflow.cc
index f4288abc6da..11a4319ccab 100644
--- a/Trigger/TrigFTK/TrigFTKSim/standalone/dataflow.cc
+++ b/Trigger/TrigFTK/TrigFTKSim/standalone/dataflow.cc
@@ -6,6 +6,7 @@
#include "boost/program_options.hpp"
#include "boost/filesystem.hpp"
#include <iomanip>
+#include <cmath>
#include <TFile.h>
int SIGDIGITS=2;
@@ -55,7 +56,7 @@ int main(int argc, char **argv) {
Process(ientry);
}
} else {
- // loop over indifidual files (towers spread over files)
+ // loop over individual files (towers spread over files)
vector<unsigned> processed(ntower);
processedTower.resize(ntower);
for (size_t ifile=0; ifile < files.size(); ++ifile) {
@@ -262,9 +263,14 @@ void Init() {
}
cout<<"nloop="<<nloop<<"\n";
+ } else {
+ cout<<"Merged file with "<<ntower<<" towers\n";
}
divide = 1./nloop;
-
+ for(int i=0;i<ntower;i++) {
+ nRoad_tow_evt[i].reserve(nloop);
+ nFitI_tow_evt[i].reserve(nloop);
+ }
}
void Process(unsigned int ientry) {
@@ -277,7 +283,10 @@ void Process(unsigned int ientry) {
thisevt = stream[itower]->eventNumber();
break;
}
- if (ientry % 50 == 0) cerr << "ientry = " << ientry << " and run = " << thisrun << " and event = " << thisevt << endl;
+ if (ientry % 50 == 0)
+ cerr << "ientry = " << ientry << " and run = " << thisrun
+ << " and event = " << thisevt
+ << endl;
static int first=true;
@@ -290,9 +299,9 @@ void Process(unsigned int ientry) {
outputHistMin->SetBinContent(itower+1,ibin,x); \
if(first) { outputHistAvg->GetYaxis()->SetBinLabel(ibin,name); \
outputHistMin->GetYaxis()->SetBinLabel(ibin,name); \
- outputHistMax->GetYaxis()->SetBinLabel(ibin,name); }
-
- vector<float> nRoad_pertow, nFitI_pertow;
+ outputHistMax->GetYaxis()->SetBinLabel(ibin,name); \
+ cout<<"fill "<<name<<" at "<<ibin<<" val="<<x<<"\n"; \
+ }
for (int itower = 0; itower < ntower; itower++) {
if(!activeTower[itower]) continue;
@@ -300,26 +309,25 @@ void Process(unsigned int ientry) {
if (stream[itower] == 0) { cerr << "ERROR: Road stream " << itower << " = 0 " << std::endl; return;}
int ibin=0;
+ int nRoads=stream[itower]->naoGetNroadsAM();
+ if(!nRoads) nRoads=stream[itower]->getNRoads();
ADD_TO_HIST(1,"nevent");
- ADD_TO_HIST( stream[itower]->naoGetNroadsAM(),"nRoad");
+ ADD_TO_HIST( nRoads,"nRoad");
ADD_TO_HIST( trackstream[itower]->getNFits(),"nFit");
ADD_TO_HIST( trackstream[itower]->getNFitsI(),"nFitI");
ADD_TO_HIST( trackstream[itower]->getNTracks(),"nTrack");
ADD_TO_HIST( trackstream[itower]->getNTracks(),"nTrackI");
- nRoad[itower] += stream[itower]->naoGetNroadsAM()*divide;
+ nRoad[itower] += nRoads*divide;
nFit[itower] += trackstream[itower]->getNFits()*divide;
nFitI[itower] += trackstream[itower]->getNFitsI()*divide;
nTrack[itower] += trackstream[itower]->getNTracks()*divide;
nTrackI[itower] += trackstream[itower]->getNTracksI()*divide;
- nRoad_pertow.push_back(stream[itower]->naoGetNroadsAM());
- nFitI_pertow.push_back(trackstream[itower]->getNFitsI());
-
+ nRoad_tow_evt[itower].push_back(nRoads);
+ nFitI_tow_evt[itower].push_back(trackstream[itower]->getNFitsI());
// for each tower and each entry register the value to extract later the deciles
-
-
Int_t ntrackBeforeHW = trackstream[itower]->getNTracks() + trackstream[itower]->getNFitsHWRejected();
@@ -359,7 +367,7 @@ void Process(unsigned int ientry) {
for (int il = 0; il < 8; il++) {
nCluster[il][itower] += stream[itower]->naoGetNclus(il)*divide;
nCluster_road[il][itower] += stream[itower]->naoGetNclus_road(il)*divide;
- nSSID[il][itower] += stream[itower]->naoGetNss(il)*divide;
+ //SSID[il][itower] += stream[itower]->naoGetNss(il)*divide;
}
ADD_TO_HIST( stream[itower]->naoGetNclus(0),"nCluster0");
ADD_TO_HIST( stream[itower]->naoGetNclus(1),"nCluster1");
@@ -381,20 +389,17 @@ void Process(unsigned int ientry) {
ADD_TO_HIST( stream[itower]->naoGetNclus_road(7),"nCluster(road7)");
- ADD_TO_HIST( stream[itower]->naoGetNss(0),"nSSID0");
+ /* ADD_TO_HIST( stream[itower]->naoGetNss(0),"nSSID0");
ADD_TO_HIST( stream[itower]->naoGetNss(1),"nSSID1");
ADD_TO_HIST( stream[itower]->naoGetNss(2),"nSSID2");
ADD_TO_HIST( stream[itower]->naoGetNss(3),"nSSID3");
ADD_TO_HIST( stream[itower]->naoGetNss(4),"nSSID4");
ADD_TO_HIST( stream[itower]->naoGetNss(5),"nSSID5");
ADD_TO_HIST( stream[itower]->naoGetNss(6),"nSSID6");
- ADD_TO_HIST( stream[itower]->naoGetNss(7),"nSSID7");
+ ADD_TO_HIST( stream[itower]->naoGetNss(7),"nSSID7"); */
}
- nRoadArr.push_back(nRoad_pertow);
- nFitIArr.push_back(nFitI_pertow);
-
first=false;
}
@@ -434,52 +439,60 @@ void Terminate() {
printinfo (nFitMajority, "NFitSSB Majority");
printinfo (nFitMajoritySCT, "NFitSSB Majority missing SCT");
printinfo (nFitMajorityPix, "NFitSSB Majority missing Pix");
- int size_nRoad, first_decile_pos_nRoad, last_decile_pos_nRoad, max_quickselect_nRoad, first_decile_nRoad, last_decile_nRoad ;
- int size_nFitI, first_decile_pos_nFitI, last_decile_pos_nFitI, max_quickselect_nFitI, first_decile_nFitI, last_decile_nFitI ;
- // definition of the quartiles
- size_nRoad = nRoadArr.size();
- first_decile_pos_nRoad = size_nRoad/10;
- last_decile_pos_nRoad = 9*first_decile_pos_nRoad;
- max_quickselect_nRoad = size_nRoad - 1;
- size_nFitI = nFitIArr.size();
- first_decile_pos_nFitI = size_nFitI/10;
- last_decile_pos_nFitI = 9*first_decile_pos_nFitI;
- max_quickselect_nFitI = size_nFitI - 1;
+
for (int itower = 0; itower < ntower; itower++) {
- // if(!processedTower[itower]) continue;
-
- // to generalize in case we run on multiple towers
- vector<int> nRoad_perevt; nRoad_perevt.resize(size_nRoad);
- vector<int> nFitI_perevt; nRoad_perevt.resize(size_nFitI);
- AddBreak();
- for(int i = 0; i < size_nRoad; i++){
- nRoad_perevt[i]=nRoadArr[i][0];
+ if(!processedTower[itower]) continue;
+ int first_decile_nRoad=0;
+ int last_decile_nRoad=0;
+ int first_decile_pos_nRoad=nRoad_tow_evt[itower].size()/10;
+ int last_decile_pos_nRoad=nRoad_tow_evt[itower].size()*9/10;
+ if(nRoad_tow_evt[itower].size()) {
+ vector<float>::iterator nth;
+ nth=nRoad_tow_evt[itower].begin()+first_decile_pos_nRoad;
+ nth_element(nRoad_tow_evt[itower].begin(),nth,
+ nRoad_tow_evt[itower].end());
+ first_decile_nRoad=(*nth);
+ nth=nRoad_tow_evt[itower].begin()+last_decile_pos_nRoad;
+ nth_element(nRoad_tow_evt[itower].begin(),nth,
+ nRoad_tow_evt[itower].end());
+ last_decile_nRoad=(*nth);
}
- for(int i = 0; i < size_nFitI; i++){
- nFitI_perevt[i]=nFitIArr[i][0];
- }
-
- first_decile_nRoad = quick_select(nRoad_perevt, 0, max_quickselect_nRoad, first_decile_pos_nRoad);
- last_decile_nRoad = quick_select(nRoad_perevt, 0, max_quickselect_nRoad, last_decile_pos_nRoad);
-
- AddBreak();
- myfile << " nRoad first decile position is " << first_decile_pos_nRoad << " for a value of " << first_decile_nRoad << endl;
-
- myfile << "nRoad last decile position is " << last_decile_pos_nRoad << " for a value of " << last_decile_nRoad << endl;
+ int first_decile_nFitI=0;
+ int last_decile_nFitI=0;
+ int first_decile_pos_nFitI=nFitI_tow_evt[itower].size()/10;
+ int last_decile_pos_nFitI=nFitI_tow_evt[itower].size()*9/10;
+ if(nFitI_tow_evt[itower].size()) {
+ vector<float>::iterator nth;
+ nth=nFitI_tow_evt[itower].begin()+
+ nFitI_tow_evt[itower].size()/10;
+ nth_element(nFitI_tow_evt[itower].begin(),nth,
+ nFitI_tow_evt[itower].end());
+ first_decile_nFitI=(*nth);
+ nth=nFitI_tow_evt[itower].begin()+
+ nFitI_tow_evt[itower].size()*9/10;
+ nth_element(nFitI_tow_evt[itower].begin(),nth,
+ nFitI_tow_evt[itower].end());
+ last_decile_nFitI=(*nth);
+ }
+ AddBreak();
+ AddBreak();
+ myfile << " nRoad first decile position is " << first_decile_pos_nRoad
+ << " for a value of " << first_decile_nRoad << endl;
+ myfile << "nRoad last decile position is " << last_decile_pos_nRoad
+ << " for a value of " << last_decile_nRoad << endl;
- first_decile_nFitI = quick_select(nFitI_perevt, 0, max_quickselect_nFitI, first_decile_pos_nFitI);
- last_decile_nFitI = quick_select(nFitI_perevt, 0, max_quickselect_nFitI, last_decile_pos_nFitI);
+ myfile << " nFitI first decile position is " << first_decile_pos_nFitI
+ << " for a value of " << first_decile_nFitI << endl;
- myfile << " nFitI first decile position is " << first_decile_pos_nFitI << " for a value of " << first_decile_nFitI << endl;
-
- myfile << " nFitI last decile position is " << last_decile_pos_nFitI << " for a value of " << last_decile_nFitI << endl;
+ myfile << " nFitI last decile position is " << last_decile_pos_nFitI
+ << " for a value of " << last_decile_nFitI << endl;
- //fill out histo with values
- outputHistFirstDecile->SetBinContent(itower+1, 1, first_decile_nRoad);
- outputHistLastDecile->SetBinContent(itower+1, 1, last_decile_nRoad);
- outputHistFirstDecile->SetBinContent(itower+1, 2, first_decile_nFitI);
- outputHistLastDecile->SetBinContent(itower+1, 2, last_decile_nFitI);
+ //fill out histo with values
+ outputHistFirstDecile->SetBinContent(itower+1, 1, first_decile_nRoad);
+ outputHistLastDecile->SetBinContent(itower+1, 1, last_decile_nRoad);
+ outputHistFirstDecile->SetBinContent(itower+1, 2, first_decile_nFitI);
+ outputHistLastDecile->SetBinContent(itower+1, 2, last_decile_nFitI);
}
//myfile << " first decile position is cool " << endl;
@@ -507,38 +520,40 @@ void Terminate() {
outputRootFile=0;
}
+double roundTo(double x,int precision) {
+ int significantDigit=0;
+ if(x!=0) significantDigit=trunc(log10(fabs(x)));
+ if(precision>=1) {
+ double factor=pow(10.,precision-1-significantDigit);
+ return round(x*factor)/factor;
+ }
+ return x;
+}
void printinfo(float towers[MAXTOWER], TString text) {
+ int barrelN=0,endcapN=0;
float barrelmean(0), endcapmean(0), barrelmax(0), endcapmax(0);
for (int i = 0; i<ntower; i++) {
+ if(!processedTower[i]) continue;
if (i < (ntower/4) || i >= 3*(ntower/4.)) { // kludge not always (?) guaranteed to work
if (towers[i] > endcapmax) endcapmax = towers[i];
- endcapmean += towers[i]/(ntower/2.);
+ endcapmean += towers[i];
+ endcapN++;
}
else {
if (towers[i] > barrelmax) barrelmax = towers[i];
- barrelmean += towers[i]/(ntower/2.);
+ barrelmean += towers[i];
+ barrelN++;
}
}
+ if(barrelN) barrelmean/= barrelN;
+ if(endcapN) endcapmean /= endcapN;
- barrelmean = ([barrelmean](int SIGDIGITS)->double{
- std::stringstream lStream;
- lStream << std::setprecision(SIGDIGITS) << barrelmean; return std::stod(lStream.str());
- })(SIGDIGITS);
- barrelmax = ([barrelmax](int SIGDIGITS)->double{
- std::stringstream lStream;
- lStream << std::setprecision(SIGDIGITS) << barrelmax; return std::stod(lStream.str());
- })(SIGDIGITS);
- endcapmean = ([endcapmean](int SIGDIGITS)->double{
- std::stringstream lStream;
- lStream << std::setprecision(SIGDIGITS) << endcapmean; return std::stod(lStream.str());
- })(SIGDIGITS);
- endcapmax = ([endcapmax](int SIGDIGITS)->double{
- std::stringstream lStream;
- lStream << std::setprecision(SIGDIGITS) << endcapmax; return std::stod(lStream.str());
- })(SIGDIGITS);
-
+ barrelmean = roundTo(barrelmean,SIGDIGITS);
+ barrelmax = roundTo(barrelmax,SIGDIGITS);
+ endcapmean = roundTo(endcapmean,SIGDIGITS);
+ endcapmax = roundTo(endcapmax,SIGDIGITS);
myfile << text << "\t\t" << barrelmean << "\t\t" << barrelmax << "\t\t" << endcapmean << "\t\t" << endcapmax << endl;
myfileTeX << text << "&" << barrelmean << "&" << barrelmax << "&" << endcapmean << "&" << endcapmax << " \\\\" << endl;
@@ -551,39 +566,3 @@ void AddBreak(int n) {
}
}
-// some functions used for the calculation of the k^th value of an r+1 long array called input with the method called quick_select.
-//int partition(vector<float> input, int p, int r)
-//int partition(int* input, int p, int r)
-int partition(vector<int> input, int p, int r)
-{
- int pivot = input[r];
-
- while ( p < r )
- {
- while ( input[p] < pivot )
- p++;
-
- while ( input[r] > pivot )
- r--;
-
- if ( input[p] == input[r] )
- p++;
- else if ( p < r ) {
- int tmp = input[p];
- input[p] = input[r];
- input[r] = tmp;
- }
- }
-
- return r;
-}
-
-int quick_select(vector<int> input, int p, int r, int k)
-{
- if ( p == r ) return input[p];
- int j = partition(input, p, r);
- int length = j - p + 1;
- if ( length == k ) return input[j];
- else if ( k < length ) return quick_select(input, p, j - 1, k);
- else return quick_select(input, j + 1, r, k - length);
-}
diff --git a/Trigger/TrigFTK/TrigFTKSim/standalone/dataflow.h b/Trigger/TrigFTK/TrigFTKSim/standalone/dataflow.h
index 9e62f224106..ef22c9466f4 100644
--- a/Trigger/TrigFTK/TrigFTKSim/standalone/dataflow.h
+++ b/Trigger/TrigFTK/TrigFTKSim/standalone/dataflow.h
@@ -33,7 +33,7 @@ float nConn[MAXTOWER], nExtrapAUX[MAXTOWER];
FTKRoadStream *stream[MAXTOWER];
FTKTrackStream *trackstream[MAXTOWER];
-vector< vector<float>> nRoadArr, nFitIArr;
+vector<float> nRoad_tow_evt[MAXTOWER], nFitI_tow_evt[MAXTOWER];
// events to run over
@@ -73,13 +73,3 @@ void Process(unsigned int ientry);
void Terminate();
void printinfo(float towers[MAXTOWER], TString text);
void AddBreak(int n = 1);
-
-/*int quick_select(vector<float> input, int p, int r, int k);
- int partition(vector<float> input, int p, int r);*/
-
-//int quick_select(int* input, int p, int r, int k);
-
-int quick_select(vector<int> input, int p, int r, int k);
-
-int partition(vector<int> input, int p, int r);
-//int partition(int* input, int p, int r);
--
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