Merge branch '82/build-fixes-and-improvements' into 'dev'

[82] Build: bugfixes and improvements

See merge request webservices/cern-search/cern-search-rest-api!52

.env

@@ -13,7 +13,7 @@ INVENIO_ADMIN_ACCESS_GROUPS=b
 INVENIO_ADMIN_USER=test@example.com
 INVENIO_ADMIN_VIEW_ACCESS_GROUPS=a
 INVENIO_APP_ALLOWED_HOSTS=['localhost', 'nginx']
-INVENIO_CACHE_REDIS_HOST=cache
+INVENIO_CACHE_REDIS_HOST=redis
 INVENIO_CACHE_REDIS_URL=redis://redis:6379/0
 INVENIO_CERN_APP_CREDENTIALS={'consumer_key':'bah'}
 INVENIO_CERN_APP_CREDENTIALS_CONSUMER_KEY=xxx
@@ -22,7 +22,7 @@ INVENIO_INDEXER_DEFAULT_DOC_TYPE=test-doc_v0.0.2
 INVENIO_INDEXER_DEFAULT_INDEX=cernsearch-test-test-doc_v0.0.2
 INVENIO_LOGGING_CONSOLE='False'
 INVENIO_LOGGING_CONSOLE_LEVEL=WARNING
-INVENIO_RATELIMIT_STORAGE_URL='redis://cache:6379/3'
+INVENIO_RATELIMIT_STORAGE_URL='redis://redis:6379/3'
 INVENIO_SEARCH_ELASTIC_HOSTS=elasticsearch
 INVENIO_SEARCH_INDEX_PREFIX=cernsearch-
 INVENIO_SQLALCHEMY_DATABASE_URI=postgresql+psycopg2://uservice:itsjust1234@postgres/uservice

Pipfile

@@ -35,6 +35,7 @@ redis = ">=2.10.0,<3.0.0"
 uwsgi-tools = ">=1.1.1,<1.2.0"
 Flask = "*"
 uWSGI = ">=2.0.16"
+marshmallow = "<3"
 
 [requires]
 python_version = "3.6"

Pipfile.lock

 {
     "_meta": {
         "hash": {
-            "sha256": "b498d3bfc9766dca19c38638de49a569414e1a461e116ce80c02630a68006e35"
+            "sha256": "a17c1a5523fd862e252dd3f3ff653f1767960813634f20e8f1c183ad00dc3475"
         },
         "pipfile-spec": 6,
         "requires": {
@@ -29,13 +29,6 @@
             ],
             "version": "==2.5.1"
         },
-        "appnope": {
-            "hashes": [
-                "sha256:5b26757dc6f79a3b7dc9fab95359328d5747fcb2409d331ea66d0272b90ab2a0",
-                "sha256:8b995ffe925347a2138d7ac0fe77155e4311a0ea6d6da4f5128fe4b3cbe5ed71"
-            ],
-            "version": "==0.1.0"
-        },
         "arrow": {
             "hashes": [
                 "sha256:10257c5daba1a88db34afa284823382f4963feca7733b9107956bed041aff24f",
@@ -43,13 +36,6 @@
             ],
             "version": "==0.15.2"
         },
-        "asn1crypto": {
-            "hashes": [
-                "sha256:7bb1cc02a5620b3d72da4ba070bda2f44f0e61b44dee910a302eddff802b6fb5",
-                "sha256:87620880a477123e01177a1f73d0f327210b43a3cdbd714efcd2fa49a8d7b384"
-            ],
-            "version": "==1.2.0"
-        },
         "attrs": {
             "hashes": [
                 "sha256:08a96c641c3a74e44eb59afb61a24f2cb9f4d7188748e76ba4bb5edfa3cb7d1c",
@@ -103,7 +89,6 @@
                 "sha256:4c4532aa683f170f40bd76f928b70bc06ff171a959e06e71bf35f2f9d6031ef9",
                 "sha256:528e56767ae7e43a16cfef24ee1062491f5754368d38fcfffa861cdb9ef219be"
             ],
-            "markers": "python_version < '3.7'",
             "version": "==4.3.0"
         },
         "certifi": {
@@ -115,40 +100,38 @@
         },
         "cffi": {
             "hashes": [
-                "sha256:08f99e8b38d5134d504aa7e486af8e4fde66a2f388bbecc270cdd1e00fa09ff8",
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-                "sha256:40eddb3589f382cb950f2dcf1c39c9b8d7bd5af20665ce273815b0d24635008b",
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-                "sha256:85bbf77ffd12985d76a69d2feb449e35ecdcb4fc54a5f087d2bd54158ae5bb0c",
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-                "sha256:8f7eec920bc83692231d7306b3e311586c2e340db2dc734c43c37fbf9c981d24",
-                "sha256:8fe230f612c18af1df6f348d02d682fe2c28ca0a6c3856c99599cdacae7cf226",
-                "sha256:92068ebc494b5f9826b822cec6569f1f47b9a446a3fef477e1d11d7fac9ea895",
-                "sha256:b57e1c8bcdd7340e9c9d09613b5e7fdd0c600be142f04e2cc1cc8cb7c0b43529",
-                "sha256:ba956c9b44646bc1852db715b4a252e52a8f5a4009b57f1dac48ba3203a7bde1",
-                "sha256:ca42034c11eb447497ea0e7b855d87ccc2aebc1e253c22e7d276b8599c112a27",
-                "sha256:dc9b2003e9a62bbe0c84a04c61b0329e86fccd85134a78d7aca373bbbf788165",
-                "sha256:dd308802beb4b2961af8f037becbdf01a1e85009fdfc14088614c1b3c383fae5",
-                "sha256:e77cd105b19b8cd721d101687fcf665fd1553eb7b57556a1ef0d453b6fc42faa",
-                "sha256:f56dff1bd81022f1c980754ec721fb8da56192b026f17f0f99b965da5ab4fbd2",
-                "sha256:fa4cc13c03ea1d0d37ce8528e0ecc988d2365e8ac64d8d86cafab4038cb4ce89",
-                "sha256:fa8cf1cb974a9f5911d2a0303f6adc40625c05578d8e7ff5d313e1e27850bd59",
-                "sha256:fb003019f06d5fc0aa4738492ad8df1fa343b8a37cbcf634018ad78575d185df",
-                "sha256:fd409b7778167c3bcc836484a8f49c0e0b93d3e745d975749f83aa5d18a5822f",
-                "sha256:fe5d65a3ee38122003245a82303d11ac05ff36531a8f5ce4bc7d4bbc012797e1"
-            ],
-            "version": "==1.13.0"
+                "sha256:00d890313797d9fe4420506613384b43099ad7d2b905c0752dbcc3a6f14d80fa",
+                "sha256:0cf9e550ac6c5e57b713437e2f4ac2d7fd0cd10336525a27224f5fc1ec2ee59a",
+                "sha256:0ea23c9c0cdd6778146a50d867d6405693ac3b80a68829966c98dd5e1bbae400",
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+                "sha256:1e389e069450609c6ffa37f21f40cce36f9be7643bbe5051ab1de99d5a779526",
+                "sha256:263242b6ace7f9cd4ea401428d2d45066b49a700852334fd55311bde36dcda14",
+                "sha256:33142ae9807665fa6511cfa9857132b2c3ee6ddffb012b3f0933fc11e1e830d5",
+                "sha256:364f8404034ae1b232335d8c7f7b57deac566f148f7222cef78cf8ae28ef764e",
+                "sha256:47368f69fe6529f8f49a5d146ddee713fc9057e31d61e8b6dc86a6a5e38cecc1",
+                "sha256:4895640844f17bec32943995dc8c96989226974dfeb9dd121cc45d36e0d0c434",
+                "sha256:558b3afef987cf4b17abd849e7bedf64ee12b28175d564d05b628a0f9355599b",
+                "sha256:5ba86e1d80d458b338bda676fd9f9d68cb4e7a03819632969cf6d46b01a26730",
+                "sha256:63424daa6955e6b4c70dc2755897f5be1d719eabe71b2625948b222775ed5c43",
+                "sha256:6381a7d8b1ebd0bc27c3bc85bc1bfadbb6e6f756b4d4db0aa1425c3719ba26b4",
+                "sha256:6381ab708158c4e1639da1f2a7679a9bbe3e5a776fc6d1fd808076f0e3145331",
+                "sha256:6fd58366747debfa5e6163ada468a90788411f10c92597d3b0a912d07e580c36",
+                "sha256:728ec653964655d65408949b07f9b2219df78badd601d6c49e28d604efe40599",
+                "sha256:7cfcfda59ef1f95b9f729c56fe8a4041899f96b72685d36ef16a3440a0f85da8",
+                "sha256:819f8d5197c2684524637f940445c06e003c4a541f9983fd30d6deaa2a5487d8",
+                "sha256:825ecffd9574557590e3225560a8a9d751f6ffe4a49e3c40918c9969b93395fa",
+                "sha256:9009e917d8f5ef780c2626e29b6bc126f4cb2a4d43ca67aa2b40f2a5d6385e78",
+                "sha256:9c77564a51d4d914ed5af096cd9843d90c45b784b511723bd46a8a9d09cf16fc",
+                "sha256:a19089fa74ed19c4fe96502a291cfdb89223a9705b1d73b3005df4256976142e",
+                "sha256:a40ed527bffa2b7ebe07acc5a3f782da072e262ca994b4f2085100b5a444bbb2",
+                "sha256:bb75ba21d5716abc41af16eac1145ab2e471deedde1f22c6f99bd9f995504df0",
+                "sha256:e22a00c0c81ffcecaf07c2bfb3672fa372c50e2bd1024ffee0da191c1b27fc71",
+                "sha256:e55b5a746fb77f10c83e8af081979351722f6ea48facea79d470b3731c7b2891",
+                "sha256:ec2fa3ee81707a5232bf2dfbd6623fdb278e070d596effc7e2d788f2ada71a05",
+                "sha256:fd82eb4694be712fcae03c717ca2e0fc720657ac226b80bbb597e971fc6928c2"
+            ],
+            "version": "==1.13.1"
         },
         "chardet": {
             "hashes": [
@@ -173,24 +156,29 @@
         },
         "cryptography": {
             "hashes": [
-                "sha256:24b61e5fcb506424d3ec4e18bca995833839bf13c59fc43e530e488f28d46b8c",
-                "sha256:25dd1581a183e9e7a806fe0543f485103232f940fcfc301db65e630512cce643",
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-                "sha256:72e24c521fa2106f19623a3851e9f89ddfdeb9ac63871c7643790f872a305dfc",
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-                "sha256:96d8473848e984184b6728e2c9d391482008646276c3ff084a1bd89e15ff53a1",
-                "sha256:ae536da50c7ad1e002c3eee101871d93abdc90d9c5f651818450a0d3af718609",
-                "sha256:b0db0cecf396033abb4a93c95d1602f268b3a68bb0a9cc06a7cff587bb9a7292",
-                "sha256:cfee9164954c186b191b91d4193989ca994703b2fff406f71cf454a2d3c7327e",
-                "sha256:e6347742ac8f35ded4a46ff835c60e68c22a536a8ae5c4422966d06946b6d4c6",
-                "sha256:f27d93f0139a3c056172ebb5d4f9056e770fdf0206c2f422ff2ebbad142e09ed",
-                "sha256:f57b76e46a58b63d1c6375017f4564a28f19a5ca912691fd2e4261b3414b618d"
-            ],
-            "version": "==2.7"
+                "sha256:02079a6addc7b5140ba0825f542c0869ff4df9a69c360e339ecead5baefa843c",
+                "sha256:1df22371fbf2004c6f64e927668734070a8953362cd8370ddd336774d6743595",
+                "sha256:369d2346db5934345787451504853ad9d342d7f721ae82d098083e1f49a582ad",
+                "sha256:3cda1f0ed8747339bbdf71b9f38ca74c7b592f24f65cdb3ab3765e4b02871651",
+                "sha256:44ff04138935882fef7c686878e1c8fd80a723161ad6a98da31e14b7553170c2",
+                "sha256:4b1030728872c59687badcca1e225a9103440e467c17d6d1730ab3d2d64bfeff",
+                "sha256:58363dbd966afb4f89b3b11dfb8ff200058fbc3b947507675c19ceb46104b48d",
+                "sha256:6ec280fb24d27e3d97aa731e16207d58bd8ae94ef6eab97249a2afe4ba643d42",
+                "sha256:7270a6c29199adc1297776937a05b59720e8a782531f1f122f2eb8467f9aab4d",
+                "sha256:73fd30c57fa2d0a1d7a49c561c40c2f79c7d6c374cc7750e9ac7c99176f6428e",
+                "sha256:7f09806ed4fbea8f51585231ba742b58cbcfbfe823ea197d8c89a5e433c7e912",
+                "sha256:90df0cc93e1f8d2fba8365fb59a858f51a11a394d64dbf3ef844f783844cc793",
+                "sha256:971221ed40f058f5662a604bd1ae6e4521d84e6cad0b7b170564cc34169c8f13",
+                "sha256:a518c153a2b5ed6b8cc03f7ae79d5ffad7315ad4569b2d5333a13c38d64bd8d7",
+                "sha256:b0de590a8b0979649ebeef8bb9f54394d3a41f66c5584fff4220901739b6b2f0",
+                "sha256:b43f53f29816ba1db8525f006fa6f49292e9b029554b3eb56a189a70f2a40879",
+                "sha256:d31402aad60ed889c7e57934a03477b572a03af7794fa8fb1780f21ea8f6551f",
+                "sha256:de96157ec73458a7f14e3d26f17f8128c959084931e8997b9e655a39c8fde9f9",
+                "sha256:df6b4dca2e11865e6cfbfb708e800efb18370f5a46fd601d3755bc7f85b3a8a2",
+                "sha256:ecadccc7ba52193963c0475ac9f6fa28ac01e01349a2ca48509667ef41ffd2cf",
+                "sha256:fb81c17e0ebe3358486cd8cc3ad78adbae58af12fc2bf2bc0bb84e8090fa5ce8"
+            ],
+            "version": "==2.8"
         },
         "decorator": {
             "hashes": [
@@ -376,9 +364,9 @@
         },
         "future": {
             "hashes": [
-                "sha256:6142ef79e2416e432931d527452a1cab3aa4a754a0a53d25b2589f79e1106f34"
+                "sha256:858e38522e8fd0d3ce8f0c1feaf0603358e366d5403209674c7b617fa0c24093"
             ],
-            "version": "==0.18.0"
+            "version": "==0.18.1"
         },
         "html5lib": {
             "hashes": [
@@ -605,10 +593,10 @@
         },
         "ipaddress": {
             "hashes": [
-                "sha256:64b28eec5e78e7510698f6d4da08800a5c575caa4a286c93d651c5d3ff7b6794",
-                "sha256:b146c751ea45cad6188dd6cf2d9b757f6f4f8d6ffb96a023e6f2e26eea02a72c"
+                "sha256:6e0f4a39e66cb5bb9a137b00276a2eff74f93b71dcbdad6f10ff7df9d3557fcc",
+                "sha256:b7f8e0369580bb4a24d5ba1d7cc29660a4a6987763faf1d8a8046830e020e7e2"
             ],
-            "version": "==1.0.22"
+            "version": "==1.0.23"
         },
         "ipython": {
             "hashes": [
@@ -763,10 +751,11 @@
         },
         "marshmallow": {
             "hashes": [
-                "sha256:077b4612f5d3b9333b736fdc6b963d2b46d409070f44ff3e6c4109645c673e83",
-                "sha256:9a2f3e8ea5f530a9664e882d7d04b58650f46190178b2264c72b7d20399d28f0"
+                "sha256:ee20892f41b2ac51f9f1927f30696a2fb91b99fe9e12bf54624e78654612cba7",
+                "sha256:f88fdf8b9cad487bf74cc03382e0e3792dd740144d4ef3395d74b03f31dcd9cf"
             ],
-            "version": "==3.2.1"
+            "index": "pypi",
+            "version": "==2.20.5"
         },
         "maxminddb": {
             "hashes": [
@@ -866,36 +855,38 @@
         },
         "psycopg2-binary": {
             "hashes": [
-                "sha256:080c72714784989474f97be9ab0ddf7b2ad2984527e77f2909fcd04d4df53809",
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-                "sha256:cd37cc170678a4609becb26b53a2bc1edea65177be70c48dd7b39a1149cabd6e",
-                "sha256:d17e3054b17e1a6cb8c1140f76310f6ede811e75b7a9d461922d2c72973f583e",
-                "sha256:d305313c5a9695f40c46294d4315ed3a07c7d2b55e48a9010dad7db7a66c8b7f",
-                "sha256:dd0ef0eb1f7dd18a3f4187226e226a7284bda6af5671937a221766e6ef1ee88f",
-                "sha256:e1adff53b56db9905db48a972fb89370ad5736e0450b96f91bcf99cadd96cfd7",
-                "sha256:f0d43828003c82dbc9269de87aa449e9896077a71954fbbb10a614c017e65737",
-                "sha256:f78e8b487de4d92640105c1389e5b90be3496b1d75c90a666edd8737cc2dbab7"
-            ],
-            "version": "==2.8.3"
+                "sha256:040234f8a4a8dfd692662a8308d78f63f31a97e1c42d2480e5e6810c48966a29",
+                "sha256:086f7e89ec85a6704db51f68f0dcae432eff9300809723a6e8782c41c2f48e03",
+                "sha256:18ca813fdb17bc1db73fe61b196b05dd1ca2165b884dd5ec5568877cabf9b039",
+                "sha256:19dc39616850342a2a6db70559af55b22955f86667b5f652f40c0e99253d9881",
+                "sha256:2166e770cb98f02ed5ee2b0b569d40db26788e0bf2ec3ae1a0d864ea6f1d8309",
+                "sha256:3a2522b1d9178575acee4adf8fd9f979f9c0449b00b4164bb63c3475ea6528ed",
+                "sha256:3aa773580f85a28ffdf6f862e59cb5a3cc7ef6885121f2de3fca8d6ada4dbf3b",
+                "sha256:3b5deaa3ee7180585a296af33e14c9b18c218d148e735c7accf78130765a47e3",
+                "sha256:407af6d7e46593415f216c7f56ba087a9a42bd6dc2ecb86028760aa45b802bd7",
+                "sha256:4c3c09fb674401f630626310bcaf6cd6285daf0d5e4c26d6e55ca26a2734e39b",
+                "sha256:4c6717962247445b4f9e21c962ea61d2e884fc17df5ddf5e35863b016f8a1f03",
+                "sha256:50446fae5681fc99f87e505d4e77c9407e683ab60c555ec302f9ac9bffa61103",
+                "sha256:5057669b6a66aa9ca118a2a860159f0ee3acf837eda937bdd2a64f3431361a2d",
+                "sha256:5dd90c5438b4f935c9d01fcbad3620253da89d19c1f5fca9158646407ed7df35",
+                "sha256:659c815b5b8e2a55193ede2795c1e2349b8011497310bb936da7d4745652823b",
+                "sha256:69b13fdf12878b10dc6003acc8d0abf3ad93e79813fd5f3812497c1c9fb9be49",
+                "sha256:7a1cb80e35e1ccea3e11a48afe65d38744a0e0bde88795cc56a4d05b6e4f9d70",
+                "sha256:7e6e3c52e6732c219c07bd97fff6c088f8df4dae3b79752ee3a817e6f32e177e",
+                "sha256:7f42a8490c4fe854325504ce7a6e4796b207960dabb2cbafe3c3959cb00d1d7e",
+                "sha256:84156313f258eafff716b2961644a4483a9be44a5d43551d554844d15d4d224e",
+                "sha256:8578d6b8192e4c805e85f187bc530d0f52ba86c39172e61cd51f68fddd648103",
+                "sha256:890167d5091279a27e2505ff0e1fb273f8c48c41d35c5b92adbf4af80e6b2ed6",
+                "sha256:9aadff9032e967865f9778485571e93908d27dab21d0fdfdec0ca779bb6f8ad9",
+                "sha256:9f24f383a298a0c0f9b3113b982e21751a8ecde6615494a3f1470eb4a9d70e9e",
+                "sha256:a73021b44813b5c84eda4a3af5826dd72356a900bac9bd9dd1f0f81ee1c22c2f",
+                "sha256:afd96845e12638d2c44d213d4810a08f4dc4a563f9a98204b7428e567014b1cd",
+                "sha256:b73ddf033d8cd4cc9dfed6324b1ad2a89ba52c410ef6877998422fcb9c23e3a8",
+                "sha256:dbc5cd56fff1a6152ca59445178652756f4e509f672e49ccdf3d79c1043113a4",
+                "sha256:eac8a3499754790187bb00574ab980df13e754777d346f85e0ff6df929bcd964",
+                "sha256:eaed1c65f461a959284649e37b5051224f4db6ebdc84e40b5e65f2986f101a08"
+            ],
+            "version": "==2.8.4"
         },
         "ptyprocess": {
             "hashes": [

docker-compose.full.yml

@@ -6,6 +6,8 @@ services:
       args:
         build_env: ${ENV}
     container_name: ${CONTAINER_NAME}
+    volumes:
+      - ./:/opt/invenio/src:delegated
     ports:
       - "5000:5000"
     depends_on:

scripts/gen-cert.sh

@@ -12,6 +12,8 @@ readonly TLS_DIR="$SCRIPT_PATH/../nginx/tls"
 readonly KEY="tls.key"
 readonly CRT="tls.crt"
 
+mkdir -p $TLS_DIR
+
 openssl req -x509 -nodes -newkey rsa:4096 \
   -subj '/C=CH/ST=Geneve/L=Geneve/O=CERN/OU=IT Department/CN=Search as a Service' \
   -keyout "$TLS_DIR/$KEY" -out "$TLS_DIR/$CRT"