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Fix issues raised by switching Jet and Isolation algs config to run3 style in run2 steering

Pierre Antoine Delsart requested to merge delsart/athena:fixJetConfigplus into master

This MR provide fixes to ATLASRECTS-6922 ATR-25261 ATR-25258 ATR-25257

I keep the Draft flag to leave time for experts to answer in the above JIRA tickets. Tagging @mhodgkin , @martindl and jet experts @sawyer @schaarsc @cdelitzs

Edited by Edward Moyse

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