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RunExEngineTestITk.py can now be asked to process the output from CreateMisalignmentITk.py

Isai Roberto Sotarriva Alvarez requested to merge isotarri/athena:master into master

-RunExEngineTestITk.py should now accept an optional argument called MisalignMode, this argument will indicate that we want to use the misalignment files produced by CreateMisalignmentITk.py as input.

-Fix to CreateMisalignmentITk.py solving a problem with the MisalignMode being registered as a string instead of an integer.

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