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Draft: Add ITk pixel 3D radiation damage template correction + improvements in the setup

Tomas Dado requested to merge tdado/athena:ITkRadiationDamage into main

This MR adds the code needed to apply charge correction ot the ITk digitisation due to the radiation damage. The code has been tested on dummy (but realistic binning) histograms.

The MR also updates the configuration a bit to make it easier/convenient to set some flags

cc @mbomben @kgrimm

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