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graph direction bug fix

Minh Tuan Pham requested to merge rearrange_eval_functions into dev

Fix a bug in the evaluation. Under EdgeClassificationStage.apply_score_cut, rearrange the edge direction if the edge is pointing inwards, applied to both the edge_index and track_edges. Otherwise, if undirected==False, we get half the efficiency, since edges are randomly directed.

Also add a a function to plot efficiency over multiple score cuts.

Add code comments.

Edited by Minh Tuan Pham

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