Prototype of new alignment configuration

Overview

This MR contains a prototype for configuring alignment jobs using a Moore-like configuration. Its main purpose is documenting the work done during past hackathons and to serve as basis for the next steps. It includes track and vertex selections, adding constraints and defining the elements to be aligned. The fundamental change is making the Alignment project depend on Moore instead of Phys.

Some documentation how to use the new configuration is provided in Alignment/Humboldt/README.md

Next steps and open points are summarised in #17 and #20

Configurations

The configurations added are

Alignment/Humboldt/options/AlignVPHalvesModules.py #example Velo alignment job
Alignment/Humboldt/options/AlignVPHalvesModules_PrKalman.py #example Velo job using PrKalman (see #16)
Alignment/Humboldt/options/AlignFTStationsLayers.py #example SciFi job
Alignment/Humboldt/options/AlignVPHalvesModules_Analyzer.py #run analyser part of example alignment job
Alignment/Humboldt/options/AlignVPHalvesModules_Iterator.py #run iterator part of example alignment job

Helper functions to set up new configuration are in Alignment/Humboldt/python/Humboldt/utils.py.

Central track and particle selections are started to be defined in

Alignment/Humboldt/python/Humboldt/TrackSelections.py
Alignment/Humboldt/python/Humboldt/ParticleSelections.py

New functionality (WIP)

• add AlignIterator taking parts from OnlineAlignment to perform iterator part offline

Tests

• add Alignment/Humboldt/tests/qmtest/humboldt.qms/align-vp-halves-modules.qmt to test new configuration
• add Alignment/Humboldt/tests/qmtest/humboldt.qms/analyzer-vp-halves-modules.qmt to test Analyzer part
• add Alignment/Humboldt/tests/qmtest/humboldt.qms/iterator-vp-halves-modules.qmt to test Iterator part
• add Alignment/Humboldt/tests/qmtest/humboldt.qms/align-vp-halves-modules-splititer.qmt to test gaudisplititer.py (WIP)

Uses Rec!2495 (merged)

Alignment/Escher/options/velo.py

@@ -13,7 +13,6 @@ from PyConf.application import configure_input, configure
 from PyConf.control_flow import CompositeNode, NodeLogic
 from PyConf.tonic import configurable
 from RecoConf.hlt2_tracking import make_hlt2_tracks
-from RecoConf.hlt1_tracking import make_pvs, all_velo_track_types
 from Moore import options
 
 options.set_input_and_conds_from_testfiledb('MiniBrunel_2018_MinBias_FTv4_MDF')
@@ -34,6 +33,9 @@ from PyConf.Algorithms import AlignAlgorithm
 from PyConf.Tools import AlignUpdateTool, EigenDiagSolvTool, AlignChisqConstraintTool
 
 
+
+
+
 @configurable
 def createAlignAlgorithm(pvs,
                          tracks,
@@ -49,10 +51,12 @@ def createAlignAlgorithm(pvs,
                          outputDataFile='',
                          onlineMode=False,
                          runList=[],
-                         useLocalFrame=True):
+                         useLocalFrame=True,
+                         xmlWriters='[xml/Conditions/VP/Alignment/Global.xml:/dd/Structure/LHCb/BeforeMagnetRegion/VP:10:0/1:0:1,xml/Conditions/VP/Alignment/Modules.xml:/dd/Structure/LHCb/BeforeMagnetRegion/VP:10:2:0:1]'):
 
     updatetool = createAlignUpdateTool()
     alignment = AlignAlgorithm(
+        name='myAlignmentAlgorithm',
         VertexLocation=pvs,
         ODINLocation=odin,
         TracksLocation=tracks,
@@ -68,7 +72,8 @@ def createAlignAlgorithm(pvs,
         OutputDataFile=outputDataFile,
         OnlineMode=onlineMode,
         RunList=runList,
-        UseLocalFrame=useLocalFrame)
+        UseLocalFrame=useLocalFrame,
+        XmlWriters = xmlWriters)
     return alignment
 
 
@@ -93,10 +98,12 @@ def createAlignUpdateTool(surveyconstraintTool=AlignChisqConstraintTool(),
 
 
 
-
+from PyConf.Algorithms import VeloClusterTrackingSIMDFull
 # note that the PVs reconstructed by TrackBeamLineVertexFinderSoA do not store the list of associated tracks. Use PatPV3DFuture instead
-from RecoConf.hlt1_tracking import make_reco_pvs, make_PatPV3DFuture_pvs
-with  reconstruction.bind(from_file=False), make_reco_pvs.bind( make_pvs_from_velo_tracks=make_PatPV3DFuture_pvs), make_hlt2_tracks.bind(light_reco=False):
+from RecoConf.hlt1_tracking import make_reco_pvs, make_PatPV3DFuture_pvs, make_VeloClusterTrackingSIMD_tracks
+#, make_reco_pvs.bind( make_pvs_from_velo_tracks=make_PatPV3DFuture_pvs)
+#with  reconstruction.bind(from_file=False), make_hlt2_tracks.bind(light_reco=True, use_pr_kf=True, fast_reco=False), make_reco_pvs.bind( make_pvs_from_velo_tracks=make_PatPV3DFuture_pvs):
+with  reconstruction.bind(from_file=False), make_hlt2_tracks.bind(light_reco=False), make_reco_pvs.bind( make_pvs_from_velo_tracks=make_PatPV3DFuture_pvs), make_VeloClusterTrackingSIMD_tracks.bind(make_tracks=VeloClusterTrackingSIMDFull):
     #make tracks and PVs
     # TODO: in principle the PVs should be an optional input for the alignment
     reco = reconstruction()
@@ -133,8 +140,10 @@ with  reconstruction.bind(from_file=False), make_reco_pvs.bind( make_pvs_from_ve
         InputLocation=pvs).OutputLocation
 
     #create ODIN
-    from PyConf.application import default_raw_event, createODIN
-    odin = createODIN(RawEvent=default_raw_event(["ODIN"])).ODIN
+
+
+    from PyConf.application import default_raw_banks, createODIN
+    odin = createODIN( RawBanks=default_raw_banks(("ODIN"))).ODIN
 
     # create input particles, use long pions as dummy for now
     # TODO: in principle these should be composite particles and be an optional input for the alginment