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Use TestOptions in tests needing it

Sebastien Ponce requested to merge sponce_TestOptions into master

Some tests had been forgotten as they were already failing due to missing input files. They now use TestOptions and fail with "cannot set input_files directly, set testfiledb_key instead", so they still have to be ported to use TestFileDB However, there is not entry matching their needs as the original input files have been lost

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