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WIP: Convert MuonIDAlgLite to functional and fix some issues with station indices.

Roel Aaij requested to merge raaij-MuonIDAlgLiteFunctional into future

Based on !476 (closed)

While fixing !476 (closed) to work with the upgrade geometry, I ran into some additional issues with the counting of stations between Run II and the upgrade. @mfontana @rvazquez , please have a look, although we should probably (also) discuss in person.

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