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Fixed mesh_converter so that it can handle coordinate system replacement of scalar fields properly

Haakan Wennloef requested to merge hwennlof/allpix-squared:dopingImportFix into master

There was an issue when converting scalar fields (e.g. doping concentrations) using mesh_converter. The issue arose when one had a coordinate system changing the place of the x-component. E.g. xyz = z x y or xyz = y z x. This would create a converted field of only zeroes, as only the x-component was exported (and only the x-component used to hold the parsed scalar values before coordinate system transformation).

It has now been fixed so that any coordinate transformation results in a final vector of the correct scalar values.

The mesh_plotter has also been updated to account for the user's requested units.

Both issues were originally reported by @mblidaru

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