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Fix small inconsistency in pruning

Merged Benjamin Paul Jaeger requested to merge fix-inconsistency-in-pruning into master

Release notes

Make treatment of shape pruning consistent with before

Details

  • If either the up or the down variation is not flat, we don't want to prune the syst.
  • If either the up or the down variation is exceeding the cut-off threshold, we want to prune.

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