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Split check_jo_consistency main into separate file [skip ci]

Spyros Argyropoulos requested to merge fixJO into master

Here I take the main function of check_jo_consistency into so that when we do:

    if os.path.exists(check_jofiles):

from /cvmfs/ the main function and therefore check_mc15includes which has been causing the CI crashes will also not be executed from the transform.

Also tagging @pengc

Edited by Spyros Argyropoulos

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