Only run logParser maxJobs times [skip modfiles]

Spyros Argyropoulosrequested to merge
fixCILP into master

Another bug fix. Since we are only running athena once then logParser should also be run only once and then all log.generate.short files should be removed.

Tested by @spalazzo successfully here: https://gitlab.cern.ch/atlas-physics/pmg/mcjoboptions/pipelines/1329415

Edited by Spyros Argyropoulos

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