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Remove obsolete external python modules

Following ATLINFR-2325, these python modules are obsolete:

  • Beaker
  • affinity
  • bunch
  • configparser
  • datadiff
  • gcovr
  • pyinotify

Ultimately the remaining modules should be moved to atlasexternals (atlasexternals!272 (closed)) but it doesn't hurt removing them from the master branch already now to make sure they are really obsolete and no new code using them is added.

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