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add option to attach a debugger from CA.run()

Walter Lampl requested to merge wlampl/athena:CA.run3 into master

Based on AtheanCommon/Debugging.py as current athena.py

Steering: CA.setDebugStage("exec") (or init or fini)
A subsequent CA.run() will attach the debugger at the desired stage.

Edited by Tadej Novak

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