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Further python3 compatibility fixes

John Derek Chapman requested to merge jchapman/athena:Python3Fixes_part3_master into master

The main fixes are for the moduleExists and AthFileLite modules in the Tools/PyUtils package. These seem to affect a lot of unit tests in the master--py3 nightlies. Other than that this merge request also includes some syntax fixes for other modules in the Tools/PyUtils package plus fixes for the PerMonComps package and two modules involved in the ComponentAccumulator-based configuration of the geometry. These changes are simply to clear out some of the noise in the unit tests, so I haven't gone as far as migrating from print to using logging.

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