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Fix ATLASRECTS-5578

Susumu Oda requested to merge oda/athena:master-ATLASRECTS-5578 into master
  • Fix ATLASRECTS-5578.
  • Add protections against index out of bounds.
  • abortBottomLoop and abortTopLoop were used in only outer for loops and should be used in inner for loops too to avoid index out of bounds.
athena runargs.RAWtoALL.py RecJobTransforms/skeleton.RAWtoALL_tf.py

of https://its.cern.ch/jira/browse/ATLASRECTS-5578 was fine with Athena master r02 + the changes.

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