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Added option to ignore C++ defaults when comparing config files

Tomasz Bold requested to merge tbold/athena:remove-defaults-from-diffs into master

When comparing the configs there is quite a few parameters set identically to the c++ default. They are part of the config pickle in the current configuration but are not so in the new JO. Added option eliminates these false-positive differneces.

Tagging @fwinkl FI as he advised against changing how the pickle is generated.

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