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DF-level trigger matching: Allow saving links not from owning containers

Jon Burr requested to merge jburr/athena:DFTrigMatchLinks into master

Changes necessary to support running the matching over view containers. This required writing a function to create an element link from an individual element - this might warrant a quick look over from L2 as it's interacting with more complex parts of the codebase...

As part of this MR I also properly migrated this tool to use read handles.

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