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Removal of Obosolete ATLFASTII code

This MR attempts to remove code which was used by ATLFASTII (and in some cases ATLFAST), but is not used by ATLFAST3. Will also address ATLASSIM-6133.

There may still be some dangling includes in legacy configuration, but these will be removed with the rest of the legacy configuration in the near future.

Edited by John Derek Chapman

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