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TrigT1CaloFexPerf: remove usage of legacy flags in EmulationConfig

Frank Winklmeier requested to merge fwinkl/athena:l1calo_scell_emu into main

Legacy flags are not allowed to be used in CA. Remove the usage of ApplyEmulatedPedestal, which is True by default and not set anywhere else. If the configurability is really needed a new-style flags has to be in introduced.

Also delete now unused L1PerfControlFlags.

Closes ATR-28285. cc @will

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