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PyUtils: Fix RNTuple Output File Validation

Alaettin Serhan Mete requested to merge amete/athena:main-fix-rntuple-validation-20240318 into main

RNTuple ART tests have been failing for over a week. It looks like changes in !69665 (merged) inadvertently broke the output file validation in jobs that produce RNTuple outputs. This MR should fix that.

cc: @gemmeren

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