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Builds for ApolloCMFPGA, Fireflies, Algorithm Tests

Gianfranco De Castro requested to merge bleeding-edge into master

Built ApolloCMFPGA class to handle registering different FF connections and interface with EMP Processor class Built Firefly classes that have monitoring information for Temp_C and Opt_Pow. Still need per-channel info for Link/Slice tests. Built Utilities class for some helper functions for ApolloCMFPGA. Built Optics.cpp to register FFs to EMP.

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