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restructuring classes for input result and output

Karri Folan Di Petrillo requested to merge cppDevel into master
  • new class inputfilehandler which automatically picks up the OpticalGraph directories to analyze. now automatically grabbing moduleID and iteration from the root file
  • new struct Result for saving per module/iteration results and summaries
  • new class databasehandler to save info to a database
  • new class websitehandler to save info to a website

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