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WIP: Incremental updates from MWGR#4

Laurent Petre requested to merge feature/mwgr-4-incremental-updates into develop

Description

This issue includes the various developments and bugfixes required to run during the MWGR-4 in both miniDAQ and global. This is WIP MR: the commits will be clean-up before any review.

List of the currently implemented changes:

  1. Set the Bx offset between the AMC13 and AMC
  2. Wait for TTC hard reset completion during configuration
  3. Check the SCA status after the SCA firmware module reset
  4. Define ohMask in the AMCManager configuration instead of auto-determining it
  5. Add re-tries to check the GBT lock
  6. Check the GEM_LOADER counters after OH FPGA programming

How Has This Been Tested?

Being tested in miniDAQ and global runs at p5.

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

  • My code follows the code style of this project.
  • My change requires a change to the documentation.
  • I have updated the documentation accordingly.
  • I have read the CONTRIBUTING document.
  • I have added tests to cover my changes.
  • All new and existing tests passed.
Edited by Laurent Petre

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