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Add flake8 pre-commit hook

Frank Winklmeier requested to merge fwinkl/Gaudi:flake8_precommit into master

Add flake8 to the pre-commit hooks and add .flake8 configuration file to the top-level project directory (this also means that developer IDEs with flake8 support will use the same flake8 configuration).

Also fix the remaining warnings (mostly in Gaudi/).

Closes #263 (closed).

Edited by Frank Winklmeier

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