WIP: New unc menu

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• d77edfed - Clean-up unused code left over from debugign

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• 2b71acb7 - New Rates

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• d514c138 - Removing an uncessary package to recude warning

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added 82 commits

• 59da64af - cleaning usage of VertexContainer for HLT Tau reconstruction
• 6ce6cfe5 - tauMonitoring: code indentation
• 80e79185 - Cleanup TrigmuComb
• 9b5242a7 - Bugfix in MSVertexRecoTool
• c31e3afb - Merge branch '21.0-PDFcreator-add-header' into '21.0'
• b4aa8535 - Update version.txt
• c8cfa0e5 - Update version.txt
• e8599956 - Add a nighly test for the ID Trigger electron reconstruction with clone removal
• 5765a338 - remove SMT_discriminant
• c99c3582 - Enable per step decision prinouts only when Trigger.doRuntimeNaviVal is enabled
• da8e8f4e - Merge branch 'amehta-master-patch-85377' into 'master'
• 37b6308e - Add caloScore variable
• 157a745d - Merge branch 'amehta-master-patch-72141' into 'master'
• fa412da7 - deleting a number of packages and files associated with Legacy (Run2) software...
• ede6352d - Merge branch 'Legacy.20210212' into 'master'
• 2f874524 - Bump projects to 22.0.28
• c6127b9a - Merge branch 'cleanup-trigmucomb' into 'master'
• 9a17bb30 - Merge branch 'R22_tauMonitoring_18Feb21' into 'master'
• 7f3967ab - Merge branch 'hlt_tau_vertex' into 'master'
• 4a27bfa4 - Resolve circular dependency warnings in jet reconstruction
• 18e424fe - Merge branch 'jetCircularDeps-210217' into 'master'
• 29ebb690 - New JO configuration of L1 muon sim
• 143016ff - Merge branch 'l1mu-sim-new-jo-config' into 'master'
• e8e7f61b - Improve MissingETAssociationHelper handling
• 02e1c453 - Merge branch 'metHelper-210128' into 'master'
• 9d06d1b9 - Config update for CaloFwdTopoTower
• 217006b8 - Merge branch 'TopoTowerFlagCleanup' into 'master'
• 42f92a9f - Adding functioning chains with dijet mass selection.
• e5a2c6ee - Merge branch 'master-MSVertexRecoAlg' into 'master'
• afda7493 - Update TriggerAPI to work with TriggerMenuMT in master (ATR-22683)
• c99093c9 - Merge branch 'master_api' into 'master'
• 8a4185d9 - Merge branch 'cherry-pick-3c825ca05e8-master' into 'master'
• 6ae6fb5a - Merge branch 'scaleGainFromHVMap' into '21.3'
• 545f4ef6 - Merge branch 'sweep_scaleGainFromHVMap_master' into 'master'
• 9c2d5a85 - Fix precision electron sequence input dependencies
• 28a541b2 - Merge branch 'FixInputDepsPrecisionElectron' into 'master'
• d3bcc0e9 - Fix bug in MuonChainFilterAlg and configure BLS specific dimuL2Sequence...
• 293ab80a - Merge branch 'master-MuonChainFilterAlg' into 'master'
• 003c8019 - Radiation damage code changes
• f8d2890d - Merge branch 'RadiationDmgSpeedUp' into 'master'
• fcfe9d47 - Merge branch 'sendintheclones' into 'master'
• 195d0555 - Merge branch 'b-tag-fix-for-ATR-22854' into 'master'
• a86e4c49 - Activate IBL special charge calibration (ATLASSIM-5035)
• b77f439b - Merge branch 'atlassim-5035' into 'master'
• 5bbfff7d - Add new job options to rerun pflow from R22 ESD.
• feeb8300 - Merge branch 'mhodgkin_PFlowESDReco' into 'master'
• e1cc8e04 - Add CSC/TGCSimHitVariables classes to NSWPRDValAlg.h/cxx. Replace runtime...
• cbaedb75 - Merge branch 'master' into 'master'
• b0f260dd - PFO v FE comparison plots in Physics Validation for FlowElements/PFOs
• 7dc7ce8f - Merge branch 'dev/PFO_FE_comparison_plots' into 'master'
• 0c55e5ee - Remove obsolete modifiers (using TrigSteer_HLT or similarly obsolete code)
• b9309ca6 - Merge branch 'modifiers_cleanup' into 'master'
• e79d51d4 - Add cmd line options to apply a vertex selector
• f05ce700 - Sweep sTGC HV to master
• aff4fc7a - fix bug in TrigBphysHypo
• f56b9aec - Merge branch 'master' into NewUncMenu
• 1ceeece0 - Add MDTDigitVariables to NSWPRDValAlg and resolve merge conflicts
• 2cf37305 - Merge branch 'master-TrigBphysHypo' into 'master'
• e90692ae - Merge branch 'enable-decision-dumping-when-right-flag' into 'master'
• 2bf4c1ed - remove code and packages unneeded in Run 3. ATR-22797
• 4b6c1c16 - Merge branch 'indetseq-cleanup-4' into 'master'
• a678d25d - Adding temporary way to correct for MM passivation
• e0243705 - Merge branch 'dev_alignment' into 'master'
• 667c05ad - L2 multi-track SA
• 8a0fec8b - Merge branch 'dev_multi-trackSA' into 'master'
• f5d9948f - RecJobTransforms cleanup
• 22eb1937 - Merge branch 'RecJobTransforms_cleanup' into 'master'
• cdc6d3d1 - Merge branch 'master-addCaloScore' into 'master'
• f371a8f1 - TriggerTransform: read the correct HLT prescale key in the debug recovery
• ccd82185 - Merge branch 'dbg-hltpsk' into 'master'
• d99fa527 - jet hypo Update JetTrigTimer and its clients + ctest tidying
• b6aee1a8 - Merge branch 'master-22823-0' into 'master'
• a7cec356 - Master ntupphysval postproc
• 0e7662c3 - Merge branch 'master-ntupphysval-postproc' into 'master'
• 3a95a5c2 - Fix Run3 MuonTrackingGeometry warnings
• a6a9a713 - Merge branch 'mdtCalib' into 'master'
• d3fa0bd7 - Merge branch 'master-mdt-digit-variables' into 'master'
• 405dc6d3 - Merge branch 'master-dijet-chains' into 'master'
• 0c7ac31d - Merge branch 'sTGC_Eff_master' into 'master'
• f25365ec - Merge branch 'vtxopt' into 'master'
• aede82ac - Merge branch 'master' into NewUncMenu
• 0e8a5c54 - Making requested changes

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• d5efd8dc - New D0 Values should be used

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added 193 commits

• b1063cb1 - Add NSW pad trigger RDO (cherry pick 8420e2f9)
• 6ffc68b9 - Update pad trigger T/P converter log messages
• 7f8453a6 - Fix unneeded extra newline in NSW_PadTriggerDataContainer::string()
• ad648d3a - Add support for VR track jets
• b6025ffb - Add MsgStream level guards to container conversion logging
• 014d7058 - Remove inheritance from vector in pad trigger persistent containers
• f2af0407 - Update NSW_PadTriggerDataContainer_p1 UUID
• c333273d - Add IOVDbSvc::postConditionsLoad() method to close conditions files
• 1dc864a0 - Fix int to float - annoying diffs when comparing to new config
• 8abd8ceb - init of all used cluster collections in LCPerf
• be0667ae - TrigSteering[Test]: delete obsolete packages
• 4d430664 - Set key for Pixel DCS FSMSTATUS and FSMSTATE if conditions data is to be used.
• 85edba68 - Made name of conditions algorithm consistent between old and new configuration.
• efa922ff - Merge branch 'master' of https://gitlab.cern.ch:8443/atlas/athena into vrJets-210202
• e92012d1 - Change defaults of the run3-style Reco ID sub-detector flags to be consistent...
• 7a030ae8 - Add VR track jets to smart slimming
• fc277a3e - increased stats for test_trig_data_v1Dev_grid test (ATR-22860)
• 8df825f7 - Add VR track jets to PHYSVAL
• 49b2ba2a - Fixup copy-paste error in LooperThresholdSet.cxx
• 20405600 - More MT protection for full-navigation from R2
• 56f08a93 - Harmonize VR jet naming scheme
• c71da75f - CxxUtils: Fix typos in comments.
• 8e682cfa - AthenaServices: Improve stack traces.
• 8615569a - CoolConvUtilities: python3 fix
• 8058f801 - AthContainers: Fix cppcheck warning.
• 0ddc2658 - TriggerMenuMT: Move test to a subdirectory.
• 83c59a99 - AthenaKernel: Fix potential race with extending mixed containers.
• 1da29099 - ThinningUtils: Fix neutral PFO thinning.
• 4506f251 - Merge the code for Bethe Heitler energy loss effects (brem) to be past of the...
• 23f9188f - Fixing variable type mismatch
• 83ff8dd1 - tauRec: final word on tau thinning
• c007170e - uncertainties update
• d605a34c - update Run3 reco ART tests
• 1c2039ee - TrigAFPHypo: Package and cmake cleanup
• 4aad0fe7 - TrigIDTPMonitor: delete obsolete Run-2 trigger package
• c07af840 - Show FillCacheInitTime status in Initialise, since this is important for debugging.
• 3eb0e495 - FillCacheInitTime should be ON for the CondAlg, and OFF for the GeoModel MuonDetectorTool.
• 00c23f37 - Make VR trackjet ghosts optional
• 375300b0 - Use EventContext in some of the tile conditions tools
• 74ee9f1e - TrigmuRoI: cleanup cmake link dependencies
• 70d2885c - Require explicit config for VR trackjet ghosts
• 55c369b7 - InDetTrigTrackResidualMonitor: delete obsolete Run-2 package
• 8b8318db - TrigHLTJetHypo: cleanup cmake dependencies
• 0091165a - Remove MuonEventTPCnvDict dummy struct
• 3f58fef6 - Use passthrough combohypo for jets
• f2efad4f - doing the diff comparison only when the Reco_tf step is successful; updated...
• cf016dcc - Use ReadDecorHandles for AMVF vertices+weights to make TTVA tool threadsafe
• 2b99d0fd - AsgTools: Suppress cppecheck warning.
• e11c802e - TRT_GeoModel: Suppress cppcheck warning.
• bc199b5f - PixelCalibAlgs: Fix cppcheck warnings.
• 0f02df69 - RootStorageSvc: Fix cppcheck warnings.
• 67b3df3f - TrigValAlgs: Fix compilation warning.
• 3a3811d0 - Merge branch 'fixPitchInMMStripsResponse' into '21.3'
• d2fb1405 - JetCalibTools: Fix clang warning.
• c11e2b1a - InDetHardScatterSelectionTool: Fix clang warning.
• 9e1af076 - L1TopoAlgorithms: Use TriggerMenuMT for L1Topo algo configs
• a5d54470 - Change RDO input tests to use AthenaMT with threads=1 or MP/MT hybrid since...
• 86ef2f46 - Merge branch 'muArtMasUp' into 'master'
• 25a4d37f - Fix warning in nightlies (small MR)
• d1423558 - Merge branch 'hepmc3_nightly_fixes_20022021_part_1' into 'master'
• a821a65a - Updates to AtlasHepMC to fix warnings in nightly builds
• c1636fba - Merge branch 'warn.TrigValAlgs-20210223' into 'master'
• 2b24233d - TrigInDetValidation : add cost monitoring to ART tests
• cbff800d - Merge branch 'master-TIDV-cost' into 'master'
• 94a3370e - Merge branch 'mixrace.AthenaKernel-20210219' into 'master'
• a999d3b2 - Merge branch 'master-add-stats-in-a-trigger-val-test' into 'master'
• 357b89a5 - Merge branch 'FixupLooperThresholdSet_master' into 'master'
• 0258bf2f - Order SCT conditions tools in the same way for data and MC.
• 14a581f9 - Try to match order of SCT conditions tools in old configuration and added missing module veto tool.
• 14cdd33b - Use common tool configuration for SCT and TRT monitoring.
• d85a78d4 - Add step to create athena.log file
• 5f16afff - Allow per-substep threading overrides in transforms
• 6d45d2b3 - Detect running legacy releases (21.X) in transforms and force MP for those
• 0e7a4bcf - Improve asetup version parsing in transforms
• 01250a45 - InDetTrigParticleCreation: delete Run-2 algorithms
• c79564f6 - Merge branch 'master-CaloLocalHadCalib' into 'master'
• caece06d - Possible sources of FPE warnings are fixed
• 90d7479f - Merge branch 'master-TRTMonitoringRun3' into 'master'
• edd70804 - TrigT2BeamSpot: package cleanup
• a9e19be9 - Test on root files convert lgbm to root tree
• fe321015 - Merge branch 'test_on_root_files_convertLGBMToRootTree' into 'master'
• 84811f69 - Merge branch 'INT_to_FLOAT' into 'master'
• 47d2f11f - Merge branch 'test.TriggerMenuMT-20210219' into 'master'
• 4dfafba7 - Merge branch 'lcneutral.ThinningUtils-20210219' into 'master'
• 91e07992 - IsolationAlgs: Fix for cosmics.
• 729f02a4 - Merge branch 'cosmic.IsolationAlgs-20210218' into 'master'
• 4a9dcbf7 - Add protections against invalid BIS78 RPC Ids
• 67d8dfd7 - Merge branch 'muPrdRpcCrash' into 'master'
• f0f476f7 - Merge branch 'cleanup_afphypo' into 'master'
• 8b69951b - Merge branch 'master-physval-jets-MET' into 'master'
• 5d36adbe - Merge branch 'tdtFeatureSegfault' into 'master'
• 75061023 - Migrate R21.2 recommendations for CommonEfficiencyTool. Updates to histogram...
• 6d71ed64 - Merge branch 'ATLTAU-1756' into 'master'
• 8858b21a - Merge branch 'nsw_unc' into 'master'
• e77f2f33 - Removed Run 2 MinBias algorithms
• 0b307320 - Merge branch 'drop-min-bias-legacy-algs' into 'master'
• 78b05e0a - Merge branch 'typo.CxxUtils-20210219' into 'master'
• a9d8b381 - Merge branch 'condLoader.close.cond.files' into 'master'
• 5708f6fc - Clean up ISF_Fatras
• e86ae366 - Merge branch 'isf-cleanup-12feb' into 'master'
• ad8db43b - Merge branch 'delete_idtpmon' into 'master'
• e06cf1e6 - Merge branch 'delete_trigsteering' into 'master'
• 6411d4fe - Merge branch 'cppcheck.PixelCalibAlgs-20210223' into 'master'
• 191611d7 - Merge branch 'cppcheck.RootStorageSvc-20210223' into 'master'
• f7dca251 - Merge branch 'vrJets-210202' into 'master'
• aade7846 - Merge branch 'clang.InDetHardScatterSelectionTool-20210223' into 'master'
• d0b9058a - Fixes WARNING Failed merging new config value
• 1f135d78 - Merge branch 'fixes-for-InDetConfig' into 'master'
• 462fb526 - add doubletZ check
• f77c1a8c - Merge branch 'py3.CoolConvUtilities-20210219' into 'master'
• 3ff9c55e - ATLASRECTS-5967 : Remove createTrackParametes in favour of createUniqueTrackParameters
• 8acf8161 - Merge branch 'remove_create_trackParameters' into 'master'
• aeba88ab - Merge branch 'cppcheck.AthContainers-20210219' into 'master'
• fe464322 - Merge branch 'cmake_trigmuroi' into 'master'
• c2b47b9b - tauRecTools: skip LRTs in tau track classification and downstream tools (ATLTAU-1772)
• 858d1b9f - Merge branch 'R22_ignoreLRT' into 'master'
• 17526998 - Merge branch 'cmake_hltjethypo' into 'master'
• 3b606d73 - Merge branch 'passthroughComboHypo' into 'master'
• 01c243a1 - Merge branch 'master-pberta-doing-diff-only-when-recotf-successful' into 'master'
• a063eaf2 - Merge branch 'cppcheck.AsgTools-20210223' into 'master'
• ee724b58 - Merge branch 'thread-safety-in-ttva-tool' into 'master'
• a143bf33 - add missing definitions to CMakeLists.txt to create Pythia, Tauola and Photospp engines
• 2e2af0c4 - Merge branch 'master-evtgen' into 'master'
• 37678629 - Merge branch 'delete_trigresmon' into 'master'
• 526b5b3d - Merge branch 'cppcheck.TRT_GeoModel-20210223' into 'master'
• 5d6fefec - Merge branch 'manual-sweep-39428' into 'master'
• dd8bed14 - Merge branch 'clang.JetCalibTools-20210223' into 'master'
• a6339c36 - Added ReadHandle for CaloCellContainer to HLTCaloTool
• 6c6df0f8 - Merge branch 'master-q431' into 'master'
• 2cb45fca - simplify InDetUsedInFitTrackDecoratorTool
• 807959ff - Merge branch 'SimplifyInDetUsedInFitTrackDecoratorTool' into 'master'
• b7e27304 - Quick analysis features from 21.2
• d312df75 - Merge branch 'master-AthAnalysisImprovements' into 'master'
• 507c8b56 - Merge branch 'l1topo_tm' into 'master'
• 681e7c51 - Update for actsv5.0.0
• 358c5811 - Merge branch 'Acts5.0' into 'master'
• e04c30e4 - Merge branch 'GsfCombinedMaterialEffects_merge_bethHeitler' into 'master'
• 8bd548bb - Merge branch 'stackdump.AthenaServices-20210219' into 'master'
• 89d513a5 - Merge branch 'master-conditionally-enable-MDT-caching' into 'master'
• 95044afa - Merge branch 'ChangeRecoDefault_master' into 'master'
• 8f1f4b04 - Merge branch 'FixInconsistentConfig_master' into 'master'
• 2697210d - Merge branch 'cherry-pick-14545a8482f-master' into 'master'
• a4b92c13 - Merge branch 'master-directioart_20210223' into 'master'
• 5038f410 - Changing to the latest menui structure, this doesn'
• 493de688 - Merge branch 'NewUncMenu' into 'master'
• 8e017a45 - Merge branch 'R22_tauCellThinning' into 'master'
• ab074f3c - Add placeholder Sensitive Detector blocks for ITkPixel
• 989c010e - Merge branch 'master-addPixelSDConfigPlaceholder' into 'master'
• c6c6c244 - Add argparse and add --extravars amd --counter command line options, change...
• a09f6ae8 - Merge branch 'master-xaoddigest_20210119' into 'master'
• a081765e - Merge branch 'tile' into 'master'
• 1049aab2 - LArG4HEC: Fix cppcheck warning.
• 9f3a219b - LumiBlockComps: Fix cppcheck warnings.
• 9b703661 - DCMathSegmentMaker: Fix cppcheck warnings.
• 37dea11f - JetTagCalibration: Fix cppcheck warnings.
• d413f4c1 - Geo2G4: Fix cppcheck warnings.
• e2d969b0 - TrigDecisionTool: MT fix
• 411cc481 - AthenaConfiguration: Add debug option to CARunner.py.
• 827c94f6 - Extended context information when CA is used in debug mode
• 46f1089f - Merge branch 'component-addition-context' into 'master'
• 48312009 - Merge branch 'hepmc3_nightly_fixes_23022021_part_1' into 'master'
• fce98341 - add option for running LengthIntegrator UserAction to test
• 9f25e092 - Merge branch 'master-addLITest2' into 'master'
• 2e029d01 - jet hypo Update JetTrigTimer and its clients + ctest tidying
• dfb72cf6 - Merge branch 'master-22835-0' into 'master'
• 4d545429 - Fix CaloMuonScore for muons occurring near phi=pi
• 74ca1460 - Merge branch 'fix-calo-score' into 'master'
• bce4c4cd - Merge branch 'FixInconsistency_master_fix_inconsistentcies_old_new_config_2' into 'master'
• ae04c55f - Updating the han config webdisplay in HLT to handle Run2 and Run3 monitoring...
• 27bc94a1 - Merge branch 'master-hlt-webdisplay-run3' into 'master'
• 2f73652e - Merge branch 'cppcheck.Geo2G4-20210223' into 'master'
• d8f527f4 - correct names of the RDO collection in the MC mode, require one of the RDO/DC...
• 12358e93 - Merge branch 'occupancy-fix-after-40835' into 'master'
• 107cbdf8 - Merge branch 'cppcheck.DCMathSegmentMaker-20210223' into 'master'
• e3a31dbe - Fix vector clearing, and make histograms optional
• 0fcb1bc6 - Merge branch 'master-disableLIHists' into 'master'
• fa5514fd - eliminating unecessary lock and using directly the pointers. Why didn't I...
• 850af417 - Merge branch 'SuperCellEmulationMT.20200219' into 'master'
• 6422d38d - Merge branch 'cleanup_trigpartcreator' into 'master'
• 63ad7e3f - Merge branch 'cleanup_t2beamspot' into 'master'
• fd5c079b - Add additional aux plots in the comparison of PFOs and Flow Elements
• 68337a82 - Merge branch 'fix/clusterpfo_fe_plots' into 'master'
• 6d735875 - Merge branch 'dbg-merge-logfiles' into 'master'
• ced2742f - Many features added to JetMacher + JetHistoMatchedFiller
• bfd676f0 - Merge branch 'jgeisen_JetMatcherUpdates' into 'master'
• 9d8e6332 - Merge branch 'trf-threading' into 'master'
• 7c2915ca - Merge branch 'mt.TrigDecisionTool-20210223' into 'master'
• 410d5762 - Merge branch 'rpcIdcheck' into 'master'
• baab5185 - Merge branch 'cppcheck.JetTagCalibration-20210223' into 'master'
• ed27a83a - Merge branch 'cppcheck.LumiBlockComps-20210223' into 'master'
• a6075c6d - Merge branch 'cppcheck.LArG4HEC-20210223' into 'master'
• fb3ddd68 - Merge branch 'debug.AthenaConfiguration-20210223' into 'master'
• 1c6c5b7e - Merge Conflict

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