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Refactor folders and cmake, add print statement of currently configured sequence

Daniel Hugo Campora Perez requested to merge dcampora_refactor_folders_and_cmake into master
  • The sequences are now under folder configuration/sequences/, and their extension has been changed to .h.
  • Folders inside stream have been refactored to not have sequence_ prepended.
  • CMake uses variable instead of relative dirs, when accessing source dir.
  • A print statement has been added in order to indicate the executing sequence.

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