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Added line to documentation about how to run HLT2 on HLT1 output

Jonathan Davies requested to merge HLT2_on_HLT1_doc into master

There may be a better place to put this but I thought it useful to point out somewhere in the tutorial that the allen_hlt1 option should be set to true if one wants to run HLT2 on HLT1 output

Edited by Christoph Hasse

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