Speed up Runge-Kutta Extrapolator

Explicitly unrolls Jacobian derivative loop and Eigen matrix calculation for better optimization of the code.

Changed how bad distances are counted, therefore needs ref update 🚀 🚀 Runge Kutta implementation gets ~30% faster

/cc @decianm @ausachov @chasse @peilian @sstahl @wouter

Edited by Andre Gunther

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