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Fix for mu_CombDLLmu_IsMuon sample for Run 1

Marcel Materok requested to merge mmaterok_fix_mu_PIDmu_IsMuon_Run1 into master

Cutstrings supplied in the Run1 Config are not applied in the MakeTuples.py script. This merge request fixes this issue for the function "convert_single_file" but does not do it in the function "convert_calo_file".

In the Run1 Config the cutstring is also given incorrectly. This is also corrected for in the merge request.

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