src/TransportTool.h - apply ATLAS naming conventions. src/TransportTool.cxx - apply ATLAS naming conventions. Move set up of G4AtlasRunManager and PhysicsListTool from constructor to initialize method. ATLASSIM-3061. Tagging ISF_Geant4Tools-00-09-05-02 (ISF_Geant4Tools-00-09-05-02)

	* Tagging ISF_Geant4Tools-00-09-05-02

2016-11-04  Zach Marshall <ZLMarshall@lbl.gov>

	* Back-porting of changes for quasi-stable particle simulation to the
	transport tool and Geant4TruthIncident.  Branch for 20.3.7.Y only!
	* Tagging: ISF_Geant4Tools-00-09-05-01

2016-06-28  Elmar Ritsch <Elmar.Ritsch@cern.ch>

	* src/TransportTool.*: Improve code readability
	* Tagging ISF_Geant4Tools-00-09-05

2016-06-03  Zach Marshall <ZLMarshall@lbl.gov>

	* src/TransportTool.*: Adding list of G4 commands to be run after init
	* python/ISF_Geant4ToolsConfig.py: Passing the list of G4 commands
	* Tagging ISF_Geant4Tools-00-09-04


Former-commit-id: 29be1141