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Fix permissions and remove unused scripts

Alexandre Lossent requested to merge fix_permissions into master

Fixed various file and folder permissions.

I took the opportunity to removed unused scripts: the new eos-credentials script is in webeos-deployment!9 (merged); the livenessProbe had to be changed to work with the new webeos-config-operator, I've put it inline in the Helm chart webeos-deployment!12 (merged)

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