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Fixing all issues of darglint and removing unused functions

Alexander Froch requested to merge alfroch-fix-darglint into master

This MR fixes all darglint issues and removes the MakePlots and Plot_vars fuctions (outdated). Related to #61 (closed) and #145 (closed)

The file umami/train_tools/ is now excluded from darglint due to issues of darglint with the sphinx documentation style in the docstrings

closes #97 (closed) #145 (closed)

Edited by Manuel Guth

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