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Make commit script executable and fix athena running [skip modfiles]

Spyros Argyropoulos requested to merge CIfixes into master
  • Commit script needs to be executed not sourced (zsh and bash behaviours differ)
  • Also changed the run_athena job so that it can run with a new file which is not on cvmfs

Needed by @spalazzo

Edited by Spyros Argyropoulos

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