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FilePeekerLib: Move begin/endRun to start/stop

Frank Winklmeier requested to merge fwinkl/athena:athfile_beginrun into master

Move code from begin/endRun to start/stop as the former is deprecated.

This code was actually not being executed anymore after @ssnyder removed beginRun from the base class in athenaprivate1!10742. Apparently without any consequences.

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