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21.9: Fixing various geometry overlaps (ATLITKSW-132)

Noemi Calace requested to merge ncalace/athena:21.9-overlaps into 21.9

This MR provides the needed code changes to fix various overlaps in the ITk geometry associated to the tag ATLAS-P2-ITK-23-00-01. They apply mainly to the inner system (both barrel and endcap) and the outer endcap system. As changes to the XML require a new XML version, these changes will not affect previous geometry tags.

FYI: @nstyles, @tstreble, @tlari, @nova, @czhou

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