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Cleanup in the codes that will be migrated to HepMC3

Andrii Verbytskyi requested to merge averbyts/athena:hepmc3_nightly_fixes_11012021_part_3 into master

In this MR:

  • remove stray comments
  • use std:: namespace explicitely
  • fix soem formating
  • some small migration to HepMC3

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