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FPGATrackSim: Fixes in ART scripts

Ioannis Maznas requested to merge imaznas/athena:FPGATrackSimFix into main

This addresses two different issues:

  1. Removes from F100 IDTPM plots the eta constrains introduced when passing a PlotsDefCommonValues file instead of letting IDTPM handle it automatically
  2. Fixes the test script that produces the input files for TV generation

cc: @jahreda @sabidi

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